mRNA_H-canaliculatus_F_contig10.15.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10.15.1 vs. uniprot
Match: D7G541_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G541_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 2.830e-148 Identity = 242/408 (59.31%), Postives = 297/408 (72.79%), Query Frame = 1 Query: 34 RLAARERFSLMEKSEREISAAISIQRLKAEAERQATQLWGKGFEFASATADIDKGTVDTPPRAVFEHALTEEGFLGFAKDMDLLALPFVAHTGLIYLFRQFSSHMPRSAAFQARAKGLFAYLCSSSGVDRLGKEDIAKLLDALGLPRITEVDALPFTYADGTWDVDGFSRHLHQQHRISNIADNRSQKTSTKFETSSSSGDTGCSASLFSD----SSDP--------DTSVESTDYSTSATKHLIAMRREGFENAIQVLACIVRPAGESCECEGCTTGRCQESELQLKGGTHMEREIARLRNKTLTKELHTSWATIQLYFEVLAPNAAKLFASKACAAQDVFGAAWFSPGSRNALFENEQVLREIFLTLVGRQGDRDALNDPTSVREESGNQPGDTTVVLKGLRADCR 1221 R AARE+FSLM+K RE +AA SIQR+KAE ERQATQLW +GF +A A D T + PR VFE+ALTEEGFLGFA+D+D+LALPF HTGLI LFR+++S + + AA QARAKGLF++LC SSGV RLGKEDIAKLLD LGLPRI++ DALP+TYADG WD + F RHLH I+ +AD TS + S+ G + S SD SSDP D+SV STD ST + M+++GFE AIQ LAC VR GE+CECEGC+T R +E++L+ + GT M++E+ RLR K KELHTSWAT++LYFE+LAPNAAKLFA+KA A+QD+FG+ W SP SRN LF+N+Q+L+EIFLTLVGRQGDRD+LND RE + T VLKGLRADCR Sbjct: 9 RFAAREKFSLMDKGTRETTAAKSIQRVKAEVERQATQLWEEGFTYAPAMNGDDTETPPSAPRVVFENALTEEGFLGFARDLDILALPFATHTGLISLFRRYASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPRISDEDALPYTYADGMWDYNAFCRHLHDNQWITEVADGDESVTSGNRLSGSADGASADSRQRDSDESSTSSDPSELASAVSDSSV-STDDSTPWADRFVGMKKDGFEKAIQELACTVRLPGEACECEGCSTRRVREAKLEHQEGTTMDKEMERLRIKMHAKELHTSWATVRLYFEILAPNAAKLFAAKANASQDIFGSPWSSPTSRNLLFDNDQMLQEIFLTLVGRQGDRDSLND----REGGSRNQLEDTTVLKGLRADCR 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10.15.1 >prot_H-canaliculatus_F_contig10.15.1 ID=prot_H-canaliculatus_F_contig10.15.1|Name=mRNA_H-canaliculatus_F_contig10.15.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=408bp MDRVVRKRRQRRLAARERFSLMEKSEREISAAISIQRLKAEAERQATQLWback to top mRNA from alignment at H-canaliculatus_F_contig10:23550..28735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10.15.1 ID=mRNA_H-canaliculatus_F_contig10.15.1|Name=mRNA_H-canaliculatus_F_contig10.15.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5186bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10:23550..28735+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10:23550..28735+ >mRNA_H-canaliculatus_F_contig10.15.1 ID=mRNA_H-canaliculatus_F_contig10.15.1|Name=mRNA_H-canaliculatus_F_contig10.15.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2448bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10:23550..28735+ (Hapterophycus canaliculatus Oshoro5f female)back to top |