prot_H-canaliculatus_F_contig11803.1598.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11803.1598.1
Unique Nameprot_H-canaliculatus_F_contig11803.1598.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length238
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11803.1598.1 vs. uniprot
Match: D8LM71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM71_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.830e-45
Identity = 126/253 (49.80%), Postives = 149/253 (58.89%), Query Frame = 0 
Query:    1 MSRGSPPLWAIEIAEKQETADPA-RSLWDRIESHLRPPEDQNEQLSTRLAARPAMSLGLERNLLEAHLRLLLGKLGVPNTNRLRKEGSAAATPGNDGHENGSGGDGAVPAARQRPQTSRDGELYRRGVHAARSCCVPATGYGFP-EGSPPSREHRPSRKHTSS----------SAPTTPWIPLETQQDRAVYDFLWTSAAGCGTSG-AAGRDGRK---HFDGGGAPGGGRLEAGRSVSRPGTSRXXXSSRSSR 237
            MSR   PLWAIE  E+Q TA  A RSLWDRIESHLRP E+QN+Q   ++AARP M+ GLER LLEAHLRLLLGKLGVP+ N+  K G A+ +P +                R RP T R+ +L RR   + R CC  AT  G P E S P R+    RK + +          S PTTP++PLETQQDRAVY+FL TS    G SG AAGR G       + GG+ G      G S SRPGT R   SSRS+R
Sbjct:    1 MSRCESPLWAIETVEEQHTAGGAPRSLWDRIESHLRPQENQNKQTWQKIAARPTMAPGLERTLLEAHLRLLLGKLGVPSGNQGGKGGLASMSPSSXXXXX-XXXXXXXXVGRPRPHTFREDDLCRRS--STRPCC--ATTAGSPGEDSSPRRKCLNGRKASYARXXXXXXXXCSEPTTPYVPLETQQDRAVYEFLSTSGECDGLSGGAAGRGGNGTHGEAERGGSEG---AAVGNSRSRPGTGRRPGSSRSAR 245
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11803.1598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM71_ECTSI4.830e-4549.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11803contigH-canaliculatus_F_contig11803:1682..3823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11803.1598.1mRNA_H-canaliculatus_F_contig11803.1598.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11803 1682..3823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11803.1598.1 ID=prot_H-canaliculatus_F_contig11803.1598.1|Name=mRNA_H-canaliculatus_F_contig11803.1598.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=238bp
MSRGSPPLWAIEIAEKQETADPARSLWDRIESHLRPPEDQNEQLSTRLAA
RPAMSLGLERNLLEAHLRLLLGKLGVPNTNRLRKEGSAAATPGNDGHENG
SGGDGAVPAARQRPQTSRDGELYRRGVHAARSCCVPATGYGFPEGSPPSR
EHRPSRKHTSSSAPTTPWIPLETQQDRAVYDFLWTSAAGCGTSGAAGRDG
RKHFDGGGAPGGGRLEAGRSVSRPGTSRRPGSSRSSR*
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