|
Homology
BLAST of mRNA_H-canaliculatus_F_contig1171.1523.1 vs. uniprot
Match: D7G1A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A2_ECTSI) HSP 1 Score: 825 bits (2130), Expect = 6.750e-279 Identity = 629/906 (69.43%), Postives = 663/906 (73.18%), Query Frame = 2
Query: 272 MYPKDRLPRGKTEQMPPNLVTLFAHVMSRAIEGGNRGSAA-HGWDEVLNATCAQSSSPXXXXXXXXXXX--GTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARQTLCKSNSNGSIRGERDAAXXXXXXXXXXXXXXXXXXXXXXXXSTGEGRSS-STPGPINGQGTTSYLDRGGKHSTPHNNGRLKNSRAK-PLTSSGSAATPNPAP--AWPRQHAPRVTPKEPSRVSGGE-PSAPIKAAGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHTTSNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGRDHSPSRYPARLRSRRFPQLGSSGESPEPQLRGLGHXXXXXXXXXXSLDXXXSQGGRRLSPRHSQSMLLLREHGRGLSSEDRH-HHSHDWLVAAAGAAE---------------RGETERGGCGIRGGAGVFTQVNHERNAHAQDGHTSEGFGMRTRAA-PKSSHELPSSATAVSXXXXXXXXXXXXXXXXXXQMGTGAVVSPVPMDFRPAPXXXXXXXXXXXXXXXXXXXXXXXXTGGRPSPRVEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLIAEGCTRPDCDWDHTSFTSDKVANFQARMEAQTGTSALKFCGDPAVFFAXXXXXXXXXXXXXXXXXXXXXXXXXIGXG-VHSSPLGGSAFAAGGXXASGXXXXXXXXXXXXGAHSKRRLDLGRDHDDAGQTPSPRLKKLKRAARARSHTAAFSAA--GVESTPTGDGIGNSKSPPKEEDDMRAAEVLQGLKDIVGSQ 2905
MYPKDR+ R KT+QMPPNL+TLFAHVMSRA EGG+RGSAA HGWDEVLNA XXXXXXXXXXX GTISPGPCCPMSAQDWRKAEAFSVHLQSLLAAR LC SN + S A XXXXXXXXXXXX S EGR S ++ GP +G+ + + G K STPH NGR K RAK P SG+AATPN A AWP QH P TPKE S GGE PSAPIKA GRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAH+TS+H XXXXXXXXXXXXXXXXXX XXXXXXXXX LRGR+HSPSRYPARLRSRRFPQLG XX L+ SQGGRRLSPRHS + REHGRG+ S+ R H++H W+V A RGE E GVFT + R G EG+GMRTRAA PK S+EL +A A S Q+ TGAVVSPVPMDFRPAP XXXXXXXXXX GRPSPR EVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTN+FKFIALRGAG MYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSL+AEGCT PDCDWDHTSFTS+K+AN QARMEA TGTSALKFC DPAVF A XXXXXXXXXXXXXXXXXXXXXXXX G + SSPL GSAFA XX XXXXXXXXXXXX SKRRLDLGRD DD GQTPSPRLKKLKRAARAR TA +AA GVESTPT +G NSKSPPKEEDDMRAAEVLQGLKDIVGSQ
Sbjct: 1 MYPKDRI-RDKTQQMPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXXXXSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGSSSSSSRGAGATTGXXXXXXXXXXXXYYGPQ----SGAEGRCSPASSGPADGREPSPFPG-GRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNAAGTAWP-QHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHSTSHHXXXXXXXXXXXXXXXXXXXPGTVDSXXXXXXXXXNS---LRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXX-XXXRAGDAGADGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPSDARRQHNAHGWVVTAGAEKRAAGXXXXXXXXXXXXRGEEE---------GGVFTH-DGGRGHEGGXGRAGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSPLPGACTP-----QITTGAVVSPVPMDFRPAPPPIMSXXXXXXXXXXV--------AAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLVAEGCTHPDCDWDHTSFTSEKIANLQARMEASTGTSALKFCADPAVFLAAXXXXXXXXXXXXXXXXXXXXXXXXXXSGSIPSSPLSGSAFAGXXXXXXXXXXXXXXXXXXXXXXSKRRLDLGRD-DDGGQTPSPRLKKLKRAARARVTTAGSAAADGGVESTPTAEG--NSKSPPKEEDDMRAAEVLQGLKDIVGSQ 869
BLAST of mRNA_H-canaliculatus_F_contig1171.1523.1 vs. uniprot
Match: A0A835YUT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT3_9STRA) HSP 1 Score: 182 bits (461), Expect = 8.460e-45 Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = 2
Query: 1976 RSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLIAEGCTRPDCDWDHTSFTSDKVANFQ 2401
R+SVGGRNYTD ++QL LIEA VVA AT D A +NLPRQ RTL LTN+FK+IALRGA ++ +A+ + +E TGRHSNF+DGKID RIV V+K D+ D A T SRKFSK+LLSL+AEGC P CDW + +F SD + Q
Sbjct: 369 RTSVGGRNYTDEQLRQLQLIEAEVVARATPGDHAAFNLPRQARTLALTNMFKYIALRGAARLHAMAVARGLEGRTGRHSNFYDGKIDTRIVAVVKHDMDDAAATASRKFSKVLLSLLAEGCGDPSCDWSYATFASDNINRLQ 510
BLAST of mRNA_H-canaliculatus_F_contig1171.1523.1 vs. uniprot
Match: A0A835YSU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU2_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.300e-22 Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 2
Query: 2033 IEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSK 2308
IEA V A AT DRA ++LPRQ RTL LTN+FK+IALRGA M+ LA+ + + G+HSNF+DGKIDAR+V ++++D+GD+ T++RKFSK
Sbjct: 313 IEARVAARATDADRAAFSLPRQARTLALTNMFKYIALRGAAQMHALAVLRGLHTCGGKHSNFYDGKIDARVVAIVRRDVGDDVATQTRKFSK 404
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | expressed unknown protein |
Ec32 ortholog | Ec-12_005250.1 |
Exons | 5 |
Model size | 4399 |
Cds size | 2637 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928866.0528898-UTR-H-canaliculatus_F_contig1171:11014..11113 | 1622928866.0528898-UTR-H-canaliculatus_F_contig1171:11014..11113 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 11015..11113 + |
1696845594.7025838-UTR-H-canaliculatus_F_contig1171:11014..11113 | 1696845594.7025838-UTR-H-canaliculatus_F_contig1171:11014..11113 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 11015..11113 + |
1622928866.0771813-UTR-H-canaliculatus_F_contig1171:11722..11894 | 1622928866.0771813-UTR-H-canaliculatus_F_contig1171:11722..11894 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 11723..11894 + |
1696845594.713806-UTR-H-canaliculatus_F_contig1171:11722..11894 | 1696845594.713806-UTR-H-canaliculatus_F_contig1171:11722..11894 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 11723..11894 + |
1622928866.149097-UTR-H-canaliculatus_F_contig1171:16542..18033 | 1622928866.149097-UTR-H-canaliculatus_F_contig1171:16542..18033 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 16543..18033 + |
1696845594.7907884-UTR-H-canaliculatus_F_contig1171:16542..18033 | 1696845594.7907884-UTR-H-canaliculatus_F_contig1171:16542..18033 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1171 16543..18033 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928866.0907218-CDS-H-canaliculatus_F_contig1171:11894..11936 | 1622928866.0907218-CDS-H-canaliculatus_F_contig1171:11894..11936 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 11895..11936 + |
1696845594.7237325-CDS-H-canaliculatus_F_contig1171:11894..11936 | 1696845594.7237325-CDS-H-canaliculatus_F_contig1171:11894..11936 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 11895..11936 + |
1622928866.1020496-CDS-H-canaliculatus_F_contig1171:13060..15080 | 1622928866.1020496-CDS-H-canaliculatus_F_contig1171:13060..15080 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 13061..15080 + |
1696845594.732622-CDS-H-canaliculatus_F_contig1171:13060..15080 | 1696845594.732622-CDS-H-canaliculatus_F_contig1171:13060..15080 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 13061..15080 + |
1622928866.1176867-CDS-H-canaliculatus_F_contig1171:15507..16003 | 1622928866.1176867-CDS-H-canaliculatus_F_contig1171:15507..16003 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 15508..16003 + |
1696845594.750301-CDS-H-canaliculatus_F_contig1171:15507..16003 | 1696845594.750301-CDS-H-canaliculatus_F_contig1171:15507..16003 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 15508..16003 + |
1622928866.1334-CDS-H-canaliculatus_F_contig1171:16463..16542 | 1622928866.1334-CDS-H-canaliculatus_F_contig1171:16463..16542 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 16464..16542 + |
1696845594.7778583-CDS-H-canaliculatus_F_contig1171:16463..16542 | 1696845594.7778583-CDS-H-canaliculatus_F_contig1171:16463..16542 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1171 16464..16542 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1171.1523.1 >prot_H-canaliculatus_F_contig1171.1523.1 ID=prot_H-canaliculatus_F_contig1171.1523.1|Name=mRNA_H-canaliculatus_F_contig1171.1523.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=879bp
MYPKDRLPRGKTEQMPPNLVTLFAHVMSRAIEGGNRGSAAHGWDEVLNAT CAQSSSPSPSSSASSSSSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAA RQTLCKSNSNGSIRGERDAAAAATTAGHSNGGGISSSFHGGPPPSTGEGR SSSTPGPINGQGTTSYLDRGGKHSTPHNNGRLKNSRAKPLTSSGSAATPN PAPAWPRQHAPRVTPKEPSRVSGGEPSAPIKAAGRVAVSRRVNGGAEGAV ASLAVSRAGPGAFETPAHTTSNHHHLHQHPSRAAAAAAAAAVAAAELPCS DKDNNHNNNGNGLRGRDHSPSRYPARLRSRRFPQLGSSGESPEPQLRGLG HHHHHGASGVGSLDDDQSQGGRRLSPRHSQSMLLLREHGRGLSSEDRHHH SHDWLVAAAGAAERGETERGGCGIRGGAGVFTQVNHERNAHAQDGHTSEG FGMRTRAAPKSSHELPSSATAVSSRGPSSSSSSPLAGASTPQMGTGAVVS PVPMDFRPAPPPIMSAAAAAAAVAAVAAGGGGGSTGGRPSPRVEVAAPRP RQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARD RATYNLPRQGRTLTLTNIFKFIALRGAGTMYRLAMDKQVEAHTGRHSNFF DGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLIAEGCTRPDCDWDHTS FTSDKVANFQARMEAQTGTSALKFCGDPAVFFAAAAAAAAAGAGSAGSSA RGGGGGSTIGGGVHSSPLGGSAFAAGGSSASGAGSGAGSAGGNGGAHSKR RLDLGRDHDDAGQTPSPRLKKLKRAARARSHTAAFSAAGVESTPTGDGIG NSKSPPKEEDDMRAAEVLQGLKDIVGSQ* back to topmRNA from alignment at H-canaliculatus_F_contig1171:11015..18033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1171.1523.1 ID=mRNA_H-canaliculatus_F_contig1171.1523.1|Name=mRNA_H-canaliculatus_F_contig1171.1523.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7019bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1171:11015..18033+ (Hapterophycus canaliculatus Oshoro5f female) CACAAGCAGCAGCAGTGGTGAAAGTAGGGACCTCTTCCATTGAGGCCATC
GCGCTCATCAGCGACAGAGGATCTTCGTAGGAGCAAACCGAGACTAGAGG
TGAGCCCGAGCTGCCGCTGCTGCTGCTGCTGTGGCGCGTCTGCTTTCGCG
AATGTTTGGGTGCTGAATTTTGATCTCTACTGGCCGAAAAACGCAAGAGT
CACTCGCTGCATCAACAGCTCGGATTGCCCGTCACTCCCGACCCAACCAC
CCACGGAGCGCGGCCTCTCCCCCCCCTGCGCGCCTTGTCTAGATATACTA
CGCAAAGTGTTCCCTCACTGCGCAATGCGTCTCCCCGGTTTGTCTGTGTG
GCGCGGAGGTCTGTGCATATCGGACCATTTTTGCAGGCTCCGTCTGTCAG
ACGTGGGAAAAGTCTCCCGTTTCGTCGGACGCTCGATTTGAGGCTCCCTT
GTTCGGCGACGCAGCACGAGCGCTTCCGGGCCTCAAAGCGCCCGCCGGGC
GGCGGTGGGCCCTCCCTAGGTGTGGTAGATGCCGTCGGCGCCCCCCGCGC
GCGTCGGTGTATATACGGTTTGGGGAGAAAGACGTAATTTTTCGTTCCCT
ATTTTTGCGGCCTCTGACGACCGAAAGGGGACTCTTTCCGCCATGTCTCC
CGTGCTCACTTACACGACCATCCTCTATGTTTACTCCCGCTGTCCGACGC
TCTCACAGGCAGCGATCTGCGCGTTCTGCACACCCCGCCCACGGCTGTGC
TTGGGCACATGAACGCGTGACCGTCTCAGGCTGGCTGCTGCTGCTGGTGC
TGCTGCCGCTGCTGCTGCCGCTGCTGGTTGCTCTGTCAATACATCGAAGT
TCAGCTTTACACTCTCTCCCAACATCCAAAATGTACCCCAAGGATAGACT
CCCCCGCGGCAAGACGGAGCAGGTGAGAGAGAGGCCCGGCTCCCTGTTAC
TGATGGATGCAACGTAGGGTAAAATTGCTCACGGGTCGAGGGAACAACCA
GCCTGCGCGTGCCTCATCCTTCCTTGCCTGCCCGTGGGTCGGAGCAGCAG
TCGCGCTCCTCGGGCGCACGAGATAGTACCAGGCCAAGCTTGCTCAAATC
CTGGGGAGACAAGAGAGCGGGCTGCACCGCGGCAGGGTGGACATGGCGGA
TCCCGGTCGCTTGGAGCTTTCCTTAGTCTTTCACATATGATACGATCGAA
AGGATGTTCCCTGCGCTCTGATTTTTTCTCCTTTTTTTTTTCCTCGCGCG
CGGTCGCAGCCGAGAGACGCTACACTTCTAAGCGGGGCCGCGCGCGCGTC
TTGGGCCGTAGTGTTGTTTCCACGATGCTTTCATATATCGTTGGGTATTT
GTTGGTTGTTGTATTTGTACCTCCTGCTGTGATCCGACGACGGGTGTCGA
ACCTCGAAACGTCCGGCTCTGCGAGTTTCTGACCGGTGCGACCAGCTTTG
TTTGTATTGCCACGCGGCCTTTCCTCTACCATGCGGAACCTCGACGCTCG
CTTGTTCGAGGTGCTTCCGTGTTGTGCAGTGCTCGGTTGCTCCTTGGCCA
TCCGTGGCAACCCTGACCTGACCGGGTACGCCCTTCTGCTACGGGTAAAT
CACGACACACGATACATTACCAAGGGCGGGCGGGCTATTCCCCGCTTCCT
CGCCTGGTTTTGCGGACCTTCCCGCCAGAAGTCGAGGTCGAAGGAAGGGT
CTTAGGCAACCATTTGTTTGGTGATGGATTCCACTGGTCAATTTCGAAAC
ACATGAAACACCCTTAATGACAGACCTCGAGAGACCACGAACAACACGAG
CAGACACACTACAACGTGTTTACTCGTATTGTTTCTCCATGTGACGGTGG
TGCACAGTCTAGAAACACGTACAGCAGGCGGCGATGGTTGTCCGACAAAA
GTTCGATACAGTCTCATTCGTAAGACCGAAGCGATTGCCCCCCAGGTCTC
CGCCCGCCCGTCCTCCCTCTCGCCCTCTCCGCGCCAACGCAATCCCCCTA
CGCGATTCTGTCGGCGACGCCTTGCCTTGCCTTGCCTTGCCAACAGATGC
CGCCGAACCTGGTGACGCTGTTCGCCCACGTCATGAGCCGGGCCATCGAG
GGGGGCAACCGCGGGTCCGCAGCTCACGGGTGGGACGAAGTGCTGAACGC
AACGTGTGCACAATCCTCGTCTCCGTCGCCGTCATCTTCCGCTTCCTCTT
CTTCCTCAGGGACCATCTCGCCGGGCCCCTGCTGCCCGATGAGCGCGCAG
GACTGGCGCAAGGCGGAGGCGTTCAGCGTCCACCTCCAGTCCCTGCTCGC
GGCTCGCCAGACACTCTGCAAGTCCAACTCCAACGGGAGCATCCGCGGCG
AGCGAGACGCGGCTGCCGCCGCCACCACCGCTGGGCACAGCAACGGCGGC
GGGATCAGCTCATCGTTTCACGGCGGCCCGCCGCCGTCCACTGGGGAAGG
GCGATCCAGCTCCACCCCTGGCCCCATCAATGGACAAGGAACCACTTCCT
ATCTCGACCGTGGAGGAAAGCATTCGACGCCGCACAACAACGGCAGACTA
AAGAACAGCAGGGCGAAACCCCTCACTTCCTCCGGCTCGGCCGCGACGCC
CAACCCCGCTCCGGCGTGGCCCCGGCAGCACGCCCCACGAGTAACCCCGA
AGGAGCCTTCCCGCGTCAGTGGCGGGGAGCCCTCGGCGCCGATCAAGGCC
GCAGGGCGCGTGGCTGTCTCCCGGCGAGTGAACGGCGGTGCCGAGGGCGC
CGTGGCCTCCCTGGCCGTCTCTCGGGCAGGTCCAGGGGCCTTCGAGACGC
CGGCCCACACCACCTCTAACCACCACCACCTCCACCAACACCCCAGCCGG
GCGGCAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGAGCTGCCGTG
CAGCGACAAGGACAACAACCACAACAACAACGGCAACGGCCTGCGGGGCA
GGGACCACTCGCCGTCGAGGTACCCGGCGCGGTTGAGGAGCCGACGGTTT
CCCCAGTTGGGGAGCAGCGGCGAAAGCCCCGAGCCCCAGCTGCGAGGACT
CGGGCATCATCACCACCATGGGGCCTCTGGAGTAGGTAGCCTCGACGACG
ACCAGTCACAGGGCGGGAGACGCCTCAGTCCCCGACACTCCCAGTCGATG
CTGCTTCTGCGCGAGCACGGCCGAGGGCTTTCCTCCGAAGATCGCCACCA
CCACTCGCACGATTGGCTCGTTGCGGCGGCGGGGGCGGCAGAGAGGGGAG
AAACAGAGCGCGGGGGCTGCGGGATCAGGGGGGGTGCGGGTGTGTTCACG
CAGGTGAACCACGAGCGCAATGCGCACGCACAAGACGGCCATACGAGCGA
GGGCTTCGGGATGAGGACGCGCGCCGCGCCAAAGTCCTCGCACGAGCTGC
CGAGCTCGGCAACAGCGGTCTCCTCCCGCGGCCCTTCTTCTTCTTCTTCT
TCGCCCTTGGCCGGTGCTTCCACTCCGCAGATGGGCACCGGCGCCGTTGT
TTCCCCGGTGCCGATGGACTTCAGGCCGGCTCCGCCACCCATCATGAGCG
CCGCTGCTGCGGCCGCTGCCGTCGCTGCTGTTGCTGCCGGCGGCGGCGGT
GGCAGCACCGGCGGTCGCCCATCCCCCAGGGTGGAGGTGGCGGCACCGCG
GCCGAGGCAGGTCCTCCAGGGTGGCGGGAGGTCGGGCGGTCGGGCGGCCC
CCTTGCCGCGATCGTCTGTTGGAGGTCGCAACTACACGGACAACCACGTG
AAGCAGCTGGGACTAATCGAGGCGGCGGTAGTCGCAAGCGCCACAGCGAG
GGACCGGGCGACCTACAACTTACCGAGGCAAGGGCGCACCCTAACGCTCA
CGAACATCTTCAAGTTCATCGCCCTGCGCGGGGCGGGTACGATGTACCGC
CTCGCGATGGACAAGCAGGTGGAGGCCCACACCGGGCGCCACTCCAACTT
CTTCGATGGAAAGATTGACGCGCGCATCGTCGGCGTGATAAAGAAGGACA
TCGGCGACGAGGCCATCACCAAGTCGCGCAAGTTCTCCAAGATCTTGCTG
TCCCTGATCGCCGAAGGTGATGCTTGAACAGTTTTTGCCTGATTTCGCGC
TGTGTGCTCGTGTGACATTTACCTCGTTTTTCCGCTGGTGTTGTGGCGAA
GGTCGGGATCCACGCAGATTTTGATTGGGCTGCATTCCGGAGCTTGCCTA
CCCTTGTGGCAGTACCACTGAAGGTATTCGACGAGGGTCGAAAAGTGCGG
AAAGCACGCACACTCCACTGGGCTTGACTTGGCTTGACTACTTTTATGTA
AAGGTGTGGTGTTCGCCGAGCGAGCCTTCGCGAATCGCGGTCGCTTTTTG
CAGCGCTTCGGACTTGAACAAAAAATCAGCCTTCGCGAGGGTGCCCAGCT
CCTCTCACTTCCATCTCAGACTCGGACGCCCCTGAAACCGGATTCCTTCC
CCTTGCCCTCCCACTGCCGACATCCGTATTGGCTTATTTCCAGGGTGCAC
TCGTCCGGACTGTGACTGGGACCACACCTCCTTTACCTCGGACAAGGTCG
CGAACTTTCAGGCCAGGATGGAAGCGCAGACCGGCACGAGCGCCCTCAAG
TTCTGCGGCGACCCGGCCGTTTTTTTCGCCGCCGCTGCCGCTGCCGCCGC
TGCAGGCGCAGGGTCGGCAGGATCATCGGCGCGAGGGGGCGGTGGGGGCA
GCACCATCGGCGGCGGCGTTCACTCCTCTCCCCTCGGTGGGAGCGCCTTC
GCCGCCGGGGGTTCCTCCGCATCCGGTGCCGGTTCCGGTGCCGGTTCGGC
TGGTGGCAACGGCGGGGCGCACAGCAAGCGCAGGCTCGACCTCGGGAGGG
ACCACGACGACGCGGGTCAGACCCCGAGCCCGCGCTTGAAAAAGCTGAAG
CGAGCCGCGAGGGCACGGTCGCACACAGCTGCGTTTTCTGCCGCTGGCGT
GGAGAGCACGCCGACCGGGGACGGTATTGGCAACTCCAAGTGAGTTCGTG
TTTTCGCTCTGTCGTGCGGGTCGTTCGGGTTGGCGGGGGTGTCGCGGGTC
CAGGGAGGGGGAGAAAAGCGGAAGCGAGAAACTATCTTTCGTTGTTTGTG
CAACACGTTCAGCACTTCTATCTCACGCAGAGCTGACGCCTGTTTTTGTT
TTGACTGTCCTTCATGCCAACGTTGATGCTGCACACCTGCTCTTGTACGC
TGTGCACTGAGCAGCTCACGCGTCCGTGTTCCATGCGGATGTGTTTCGCG
CGGATTTGGCTTCGCTGCGGGGCACCAGCTGCACATGTCGCGCGAAACGT
CTGCCATACCAGCTTGAGCCGTAAACCTCATTTCGGTCTTGCCGAAGCGT
AGATTGCCTACTCGGCAAACCGCAGGTACGAACGTCCGCAGCCCCCCTCC
CCCCTCCATTCACTCGTGCCTCGGACGCCTGATGCACCACAATTTACAGA
TCCCCGCCCAAAGAAGAGGATGACATGCGCGCTGCCGAGGTGCTGCAGGG
ACTCAAGGACATCGTGGGCAGTCAGTAGGAGTGCTCTGATAGCCCGGCCC
TTCCTGGTTGTAAAAGGGCCAGTCACGAGCGTTGAAATCCTTTCGCGAGC
GCTTTGAAGCGAGATTAGCGTGAGCGCTGGGCTTAGGTGACGCACGGAAA
AGTTGTCTCTTTTTTTCGCCGAGACTTGCTTTTGGAGTGCTGCGAGTGCT
GGGTTCGAGTCTGTCTCCTTCCACGTGTAGCCCCGTTCTCAAGCGCGAAC
AAAGCTCGAGCGGTAAGCGGTGTGTTAGAGACCGGTCCCACCGACGAGTA
ACGCGGCACGGCGCGGAACATTCGGAATATAGGCGAGAGCTCCCATCCGG
CGCCAACGGGTACTTTCTGCGTGACATTTCTTATGTGGCTTTTCTGGACA
CGTGTCGGAGCGCGCCCCGGTTTTAGAGGGAGCGAGCAGAGGTAAAAAAA
AAAAAGTGGGTACGCGAAAGAGCTACGTTGGCACGATAAGTAAACAACGA
AGTTCGCGGGAAACGATGCGTGAGAAAAAATCCACGTTTAATGTGGTGAA
GCGAGAAAAGATTCGCTGCGTTTTTTTTTTCTCTCTTGGTGGTCTTGACA
TATTTTTGGGCGACAATGACGATGTCACCATTTAACAGGCTTTACAAAGA
ACACTGGGGGGACATGGTTGAAGAAGGGAAAGGTTTACTAAAGTAATATG
TAGCTGCGAGTTTGCGGTGTATTTTGGACAGGGGGGAAGGGACAGAACAG
AGGTAGTGGGGGATTGTTGTTTTTTGTTGCTGTCAAGGCGGCGGGGATTC
TTGGCGATTCCATCCGTCCGAAAGGCTTTTTTTCTAGGGGTTGTTGCAAG
AGGCAGCAAATACGATGCTGTGGCGAGGAAACGGAAGGAAGGGAGAAGAG
TTTATTCCATGGCGAGTGGAGGACGAGGCGTACGGCATCCATCGTCGGTA
TCTTGACGGCACTTTCGGATTGGCGTCGTGTCAGGGTCCTTAGTGTGAGA
GGAAGAAGGCGTGTTTTCTTTTTCTAAGGCAGCTTTGCAAATGCCGGAGC
TTCTTCGGGGGCAAGAGCAAATTAAATGCGGCGGATAGAGGGGATGATCC
GCACCGAGATAGCGTGGCAGGGGTAGGTACAGGGTCGATCGAGGCCTATC
CTAAAGCTTTCTCTCGCCTTTTGCTTGTGGATGGGAAGAATAAATGTACC
GCATTGAAAATGTAAAATATCTTTTGTAGTTTTCTAGCGACAAGAGCTTT
TCTTCGCGTGCACACACGACCGAAGCGTTTTCGCCGAAGGAAACGGACTT
CAATCGTTCCAACCGACTTATTTTTCGTCGTCTCTTTGAGTCCTGTATGT
GCCCCCGAAGGCGTCGCTCGCCTGCACGTATGCATACTATCTGGCGGTTT
GTGGAGTGCAGAAAACATCGATAGTCTAAAAGTCTCCGGATAGTTTTGGT
GCGAGAAAAGACAAAGTTGATGGAACAAGATGCGGGTCCTCTTTTGCTCC
AATATTATTTCATTCGCCC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1171:11015..18033+ >mRNA_H-canaliculatus_F_contig1171.1523.1 ID=mRNA_H-canaliculatus_F_contig1171.1523.1|Name=mRNA_H-canaliculatus_F_contig1171.1523.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5274bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1171:11015..18033+ (Hapterophycus canaliculatus Oshoro5f female) ATGTACCCCAAGGATAGACTCCCCCGCGGCAAGACGGAGCAGATGTACCC CAAGGATAGACTCCCCCGCGGCAAGACGGAGCAGATGCCGCCGAACCTGG TGACGCTGTTCGCCCACGTCATGAGCCGGGCCATCGAGGGGGGCAACCGC GGGTCCGCAGCTCACGGGTGGGACGAAGTGCTGAACGCAACGTGTGCACA ATCCTCGTCTCCGTCGCCGTCATCTTCCGCTTCCTCTTCTTCCTCAGGGA CCATCTCGCCGGGCCCCTGCTGCCCGATGAGCGCGCAGGACTGGCGCAAG GCGGAGGCGTTCAGCGTCCACCTCCAGTCCCTGCTCGCGGCTCGCCAGAC ACTCTGCAAGTCCAACTCCAACGGGAGCATCCGCGGCGAGCGAGACGCGG CTGCCGCCGCCACCACCGCTGGGCACAGCAACGGCGGCGGGATCAGCTCA TCGTTTCACGGCGGCCCGCCGCCGTCCACTGGGGAAGGGCGATCCAGCTC CACCCCTGGCCCCATCAATGGACAAGGAACCACTTCCTATCTCGACCGTG GAGGAAAGCATTCGACGCCGCACAACAACGGCAGACTAAAGAACAGCAGG GCGAAACCCCTCACTTCCTCCGGCTCGGCCGCGACGCCCAACCCCGCTCC GGCGTGGCCCCGGCAGCACGCCCCACGAGTAACCCCGAAGGAGCCTTCCC GCGTCAGTGGCGGGGAGCCCTCGGCGCCGATCAAGGCCGCAGGGCGCGTG GCTGTCTCCCGGCGAGTGAACGGCGGTGCCGAGGGCGCCGTGGCCTCCCT GGCCGTCTCTCGGGCAGGTCCAGGGGCCTTCGAGACGCCGGCCCACACCA CCTCTAACCACCACCACCTCCACCAACACCCCAGCCGGGCGGCAGCGGCG GCGGCGGCGGCGGCGGTGGCGGCGGCGGAGCTGCCGTGCAGCGACAAGGA CAACAACCACAACAACAACGGCAACGGCCTGCGGGGCAGGGACCACTCGC CGTCGAGGTACCCGGCGCGGTTGAGGAGCCGACGGTTTCCCCAGTTGGGG AGCAGCGGCGAAAGCCCCGAGCCCCAGCTGCGAGGACTCGGGCATCATCA CCACCATGGGGCCTCTGGAGTAGGTAGCCTCGACGACGACCAGTCACAGG GCGGGAGACGCCTCAGTCCCCGACACTCCCAGTCGATGCTGCTTCTGCGC GAGCACGGCCGAGGGCTTTCCTCCGAAGATCGCCACCACCACTCGCACGA TTGGCTCGTTGCGGCGGCGGGGGCGGCAGAGAGGGGAGAAACAGAGCGCG GGGGCTGCGGGATCAGGGGGGGTGCGGGTGTGTTCACGCAGGTGAACCAC GAGCGCAATGCGCACGCACAAGACGGCCATACGAGCGAGGGCTTCGGGAT GAGGACGCGCGCCGCGCCAAAGTCCTCGCACGAGCTGCCGAGCTCGGCAA CAGCGGTCTCCTCCCGCGGCCCTTCTTCTTCTTCTTCTTCGCCCTTGGCC GGTGCTTCCACTCCGCAGATGGGCACCGGCGCCGTTGTTTCCCCGGTGCC GATGGACTTCAGGCCGGCTCCGCCACCCATCATGAGCGCCGCTGCTGCGG CCGCTGCCGTCGCTGCTGTTGCTGCCGGCGGCGGCGGTGGCAGCACCGGC GGTCGCCCATCCCCCAGGGTGGAGGTGGCGGCACCGCGGCCGAGGCAGGT CCTCCAGGGTGGCGGGAGGTCGGGCGGTCGGGCGGCCCCCTTGCCGCGAT CGTCTGTTGGAGGTCGCAACTACACGGACAACCACGTGAAGCAGCTGGGA CTAATCGAGGCGGCGGTAGTCGCAAGCGCCACAGCGAGGGACCGGGCGAC CTACAACTTACCGAGGCAAGGGCGCACCCTAACGCTCACGAACATCTTCA AGTTCATCGCCCTGCGCGGGGCGGGTACGATGTACCGCCTCGCGATGGAC AAGCAGGTGGAGGCCCACACCGGGCGCCACTCCAACTTCTTCGATGGAAA GATTGACGCGCGCATCGTCGGCGTGATAAAGAAGGACATCGGCGACGAGG CCATCACCAAGTCGCGCAAGTTCTCCAAGATCTTGCTGTCCCTGATCGCC GAAGATGCCGCCGAACCTGGTGACGCTGTTCGCCCACGTCATGAGCCGGG CCATCGAGGGGGGCAACCGCGGGTCCGCAGCTCACGGGTGGGACGAAGTG CTGAACGCAACGTGTGCACAATCCTCGTCTCCGTCGCCGTCATCTTCCGC TTCCTCTTCTTCCTCAGGGACCATCTCGCCGGGCCCCTGCTGCCCGATGA GCGCGCAGGACTGGCGCAAGGCGGAGGCGTTCAGCGTCCACCTCCAGTCC CTGCTCGCGGCTCGCCAGACACTCTGCAAGTCCAACTCCAACGGGAGCAT CCGCGGCGAGCGAGACGCGGCTGCCGCCGCCACCACCGCTGGGCACAGCA ACGGCGGCGGGATCAGCTCATCGTTTCACGGCGGCCCGCCGCCGTCCACT GGGGAAGGGCGATCCAGCTCCACCCCTGGCCCCATCAATGGACAAGGAAC CACTTCCTATCTCGACCGTGGAGGAAAGCATTCGACGCCGCACAACAACG GCAGACTAAAGAACAGCAGGGCGAAACCCCTCACTTCCTCCGGCTCGGCC GCGACGCCCAACCCCGCTCCGGCGTGGCCCCGGCAGCACGCCCCACGAGT AACCCCGAAGGAGCCTTCCCGCGTCAGTGGCGGGGAGCCCTCGGCGCCGA TCAAGGCCGCAGGGCGCGTGGCTGTCTCCCGGCGAGTGAACGGCGGTGCC GAGGGCGCCGTGGCCTCCCTGGCCGTCTCTCGGGCAGGTCCAGGGGCCTT CGAGACGCCGGCCCACACCACCTCTAACCACCACCACCTCCACCAACACC CCAGCCGGGCGGCAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGAG CTGCCGTGCAGCGACAAGGACAACAACCACAACAACAACGGCAACGGCCT GCGGGGCAGGGACCACTCGCCGTCGAGGTACCCGGCGCGGTTGAGGAGCC GACGGTTTCCCCAGTTGGGGAGCAGCGGCGAAAGCCCCGAGCCCCAGCTG CGAGGACTCGGGCATCATCACCACCATGGGGCCTCTGGAGTAGGTAGCCT CGACGACGACCAGTCACAGGGCGGGAGACGCCTCAGTCCCCGACACTCCC AGTCGATGCTGCTTCTGCGCGAGCACGGCCGAGGGCTTTCCTCCGAAGAT CGCCACCACCACTCGCACGATTGGCTCGTTGCGGCGGCGGGGGCGGCAGA GAGGGGAGAAACAGAGCGCGGGGGCTGCGGGATCAGGGGGGGTGCGGGTG TGTTCACGCAGGTGAACCACGAGCGCAATGCGCACGCACAAGACGGCCAT ACGAGCGAGGGCTTCGGGATGAGGACGCGCGCCGCGCCAAAGTCCTCGCA CGAGCTGCCGAGCTCGGCAACAGCGGTCTCCTCCCGCGGCCCTTCTTCTT CTTCTTCTTCGCCCTTGGCCGGTGCTTCCACTCCGCAGATGGGCACCGGC GCCGTTGTTTCCCCGGTGCCGATGGACTTCAGGCCGGCTCCGCCACCCAT CATGAGCGCCGCTGCTGCGGCCGCTGCCGTCGCTGCTGTTGCTGCCGGCG GCGGCGGTGGCAGCACCGGCGGTCGCCCATCCCCCAGGGTGGAGGTGGCG GCACCGCGGCCGAGGCAGGTCCTCCAGGGTGGCGGGAGGTCGGGCGGTCG GGCGGCCCCCTTGCCGCGATCGTCTGTTGGAGGTCGCAACTACACGGACA ACCACGTGAAGCAGCTGGGACTAATCGAGGCGGCGGTAGTCGCAAGCGCC ACAGCGAGGGACCGGGCGACCTACAACTTACCGAGGCAAGGGCGCACCCT AACGCTCACGAACATCTTCAAGTTCATCGCCCTGCGCGGGGCGGGTACGA TGTACCGCCTCGCGATGGACAAGCAGGTGGAGGCCCACACCGGGCGCCAC TCCAACTTCTTCGATGGAAAGATTGACGCGCGCATCGTCGGCGTGATAAA GAAGGACATCGGCGACGAGGCCATCACCAAGTCGCGCAAGTTCTCCAAGA TCTTGCTGTCCCTGATCGCCGAAGGGTGCACTCGTCCGGACTGTGACTGG GACCACACCTCCTTTACCTCGGACAAGGTCGCGAACTTTCAGGCCAGGAT GGAAGCGCAGACCGGCACGAGCGCCCTCAAGTTCTGCGGCGACCCGGCCG TTTTTTTCGCCGCCGCTGCCGCTGCCGCCGCTGCAGGCGCAGGGTCGGCA GGATCATCGGCGCGAGGGGGCGGTGGGGGCAGCACCATCGGCGGCGGCGT TCACTCCTCTCCCCTCGGTGGGAGCGCCTTCGCCGCCGGGGGTTCCTCCG CATCCGGTGCCGGTTCCGGTGCCGGTTCGGCTGGTGGCAACGGCGGGGCG CACAGCAAGCGCAGGCTCGACCTCGGGAGGGACCACGACGACGCGGGTCA GACCCCGAGCCCGCGCTTGAAAAAGCTGAAGCGAGCCGCGAGGGCACGGT CGCACACAGCTGCGTTTTCTGCCGCTGGCGTGGAGAGCACGCCGACCGGG GACGGTATTGGCAACTCCAAGGTGCACTCGTCCGGACTGTGACTGGGACC ACACCTCCTTTACCTCGGACAAGGTCGCGAACTTTCAGGCCAGGATGGAA GCGCAGACCGGCACGAGCGCCCTCAAGTTCTGCGGCGACCCGGCCGTTTT TTTCGCCGCCGCTGCCGCTGCCGCCGCTGCAGGCGCAGGGTCGGCAGGAT CATCGGCGCGAGGGGGCGGTGGGGGCAGCACCATCGGCGGCGGCGTTCAC TCCTCTCCCCTCGGTGGGAGCGCCTTCGCCGCCGGGGGTTCCTCCGCATC CGGTGCCGGTTCCGGTGCCGGTTCGGCTGGTGGCAACGGCGGGGCGCACA GCAAGCGCAGGCTCGACCTCGGGAGGGACCACGACGACGCGGGTCAGACC CCGAGCCCGCGCTTGAAAAAGCTGAAGCGAGCCGCGAGGGCACGGTCGCA CACAGCTGCGTTTTCTGCCGCTGGCGTGGAGAGCACGCCGACCGGGGACG GTATTGGCAACTCCAAATCCCCGCCCAAAGAAGAGGATGACATGCGCGCT GCCGAGGTGCTGCAGGGACTCAAGGACATCGTGGGCAGTCAGTAGATCCC CGCCCAAAGAAGAGGATGACATGCGCGCTGCCGAGGTGCTGCAGGGACTC AAGGACATCGTGGGCAGTCAGTAG back to top
|