prot_H-canaliculatus_F_contig11669.1475.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11669.1475.1
Unique Nameprot_H-canaliculatus_F_contig11669.1475.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length140
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11669.1475.1 vs. uniprot
Match: A0A6H5K7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K3_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-12
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQV 39
            MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQ+
Sbjct:  950 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQM 988
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BLAST of mRNA_H-canaliculatus_F_contig11669.1475.1 vs. uniprot
Match: D8LJ88_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ88_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.290e-12
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQV 39
            MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQ+
Sbjct: 1072 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQM 1110
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11669.1475.1 vs. uniprot
Match: A0A835YQB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.170e-5
Identity = 26/39 (66.67%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQV 39
            MA+ F  KV SG ARKA+SGFSGKGFTFDD+EQ+++Q++
Sbjct:  501 MADAFGAKVASGLARKANSGFSGKGFTFDDAEQTDAQKI 539
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11669.1475.1 vs. uniprot
Match: A0A7R9U272_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U272_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.640e-5
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:    1 MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQVNHF-HPPHRLSISLAGRVCDGARCRSNLRLTS 70
            MA+ F+ KV +GQA+KA+SGF GKGFTFD SE++E+Q++         + + L     D  + R   RL +
Sbjct:  804 MADRFEAKVAAGQAKKAASGFRGKGFTFDGSEKTEAQRLEDMKRKKTEIELGLRDATEDVDKARLEARLAA 874
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11669.1475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K7K3_9PHAE1.280e-1297.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ88_ECTSI1.290e-1297.44DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YQB2_9STRA2.170e-566.67P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7R9U272_9STRA5.640e-540.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11669contigH-canaliculatus_F_contig11669:960..1379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11669.1475.1mRNA_H-canaliculatus_F_contig11669.1475.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11669 960..1379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11669.1475.1 ID=prot_H-canaliculatus_F_contig11669.1475.1|Name=mRNA_H-canaliculatus_F_contig11669.1475.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=140bp
MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQVNHFHPPHRLSI
SLAGRVCDGARCRSNLRLTSLVSWSGICVMSGIAAVDTSATVSVRFHIME
TGSRLPHVNSTPSSTGVRWTAMIPVGFAPYHTHLWSISKP
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