mRNA_H-canaliculatus_F_contig11640.1448.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: D8LF13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF13_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 2.620e-210 Identity = 322/512 (62.89%), Postives = 373/512 (72.85%), Query Frame = 1
Query: 1 QECAAALQAAFASSWHSLSAWLSVLALFLAPVLEFVAVLARAVWPHARRAATSLLRHQASLPRSTLFAEAACVVVFVGAVLLRRFIVRQRYLPRARRRVRLFRQRVNRAYVSFTASIERKFRLSARLFPHLVYWTAAGLFAWLAPEAAGHLRDNLWVLATTAWPTMYAIYLVLVLRSQHRSAGEDGVRAGGAGV-GTPGADSTSASVTRRTSARAPGAGTP--------------------ARAPGSGLARPGNVMAQDVDRVLMYWVVFTVASCWGWAADIVPENRLTPHVRTITFFVALWMHLPGPGSGLQVVYASLEPLVHKYVRDLRMPDNGHVGTLKSLRNVLVFARLLTEEHAEVLASNISDSWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAE-LSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLEFGERCMDRWASSPVAVSAPLSPEQHLQQ 1470
+E A QAAF +SWHSLSAW SVL LFL+PVL+F+AVLARAVWPHA+ AA ++ ++QASLP STL AEAA VV+F+ VLLRRFIVRQRY+PRARRRVR FR R+N AY+SFTAS+ER RLSAR FPH+VYWTAA FAWLAP+ G LRD WV AT WPT+YA+YLVL++RSQ+ ED AGG+ V GTP + + TR T+A AR SGLAR VM QDVDRVLMYWVVFTVA CWG A VPE TP+VRT+ FF+ALWMHLPGPGSGLQVVYA LEPLVH YV+DLRMP NG+ GTLK ++++LV RLLTEE AE+L NI+DSWMLVP L F TPSF+T L CLY GLV+P+FNSIKTLGRRSN +S W+ALATSA SARVRWLTYWVAYG WWH LG +LRV+PL HA+LA+L WLQ+P FRGG R+L+FGERCMDRW S P+ P QQ
Sbjct: 38 KEFVLAFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVCKYQASLPASTLCAEAAAVVLFIALVLLRRFIVRQRYIPRARRRVRNFRARINTAYMSFTASVERNLRLSARAFPHVVYWTAAASFAWLAPDLTGSLRDKFWVFATATWPTLYAVYLVLLVRSQNAVNDEDS--AGGSSVNGTP-----AGAGTRGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAR---SGLARGAGVMPQDVDRVLMYWVVFTVARCWGLLAAYVPETFFTPYVRTVAFFLALWMHLPGPGSGLQVVYAWLEPLVHTYVKDLRMPQNGYTGTLKRVQDLLVLVRLLTEEKAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTLGRRSNTSAVSTAWAALATSADSARVRWLTYWVAYGSWWHLSLCLGGILRVLPLAAHAELALLLWLQVPLFRGGGRILDFGERCMDRWTFGSDVASTPVRPLTPPQQ 539
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A835ZEP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP2_9STRA) HSP 1 Score: 248 bits (632), Expect = 5.880e-70 Identity = 163/475 (34.32%), Postives = 237/475 (49.89%), Query Frame = 1
Query: 40 SWHSLSAWLSVLALFLAPVLEFVAVLARAVWPHARRAATSLLRHQASLPRSTLFAEAACVVVFVGAVLLRRFIVRQRYLPRARRRVR----LFRQRVNRAYVSFTA---SIERKFRLSARLFPHLVYWTAAGLFAWLAPEAAGHLR-DNLWVLATTAWPTMYAIYLVLVLRSQHRSAG------EDGVRAGGAG---VGTPGADSTSASVTRRTSARAPGAGTPARAPGSGLARPGNVMAQDVDRVLMYWVVFTVASCWGWAADIVPE-NRLTP--------HVRTITFFVALWMHLPGPGSGLQVVYASLEPLVHKYVRDLRMPDNGH-VGTLKSLRNVLVFARLLTEEHAEVLASNISDSWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLL 1383
+W SL WL + L L P + + +WP R A L R Q + + + EAA + V +LLRR+++R R LPRA+ + L RQR + A +F S+ +K +L+A++ PH++YW A A L P L W T WP + I L R + RS ++GV+ G GTP S + A A G PG ++VD LMYW+VF +A C + +VP RL +R T +W+ LPG G+ + YA +EPL+H+Y+R +R P V K+ + LV R+L++E A ++A NI+DSWML+P L F+P F+ R GC+Y GL+VPA NS K L R+ + + S AR RWLTYW +G++W+ +L +L +P HAQLA+L WLQ+P FRG + +L
Sbjct: 95 TWKSLVGWLRLAHLILKPFIGIANAIGMEIWPFVRAAGVGLARWQVTRSLTFILLEAALIGAVVAMLLLRRYMIRNRLLPRAQSWIEAKRALVRQRHDSAKAAFQQLQRSVAKKSKLAAQMLPHMLYWAVAAAAALLLPAHMAALSLGPAWEFVTVGWPILTTIMLA---RGRKRSGASPSAALDEGVKGGARPSIRAGTP-------SGKGKRGAXXXXXXXXQVAKPKGEEEPGG---RNVDEALMYWIVFALAQCCAYVLGLVPGVGRLVLSTGTGWGLQLRMWTMLAGIWLQLPGSAGGIHMAYALIEPLIHEYIRAVRPPGGADAVARSKNGLSFLVTLRILSQERASMIAENIADSWMLLPTPLLVFSPGFVVRGGCMYAGLLVPAINSAKALAHRN--------TLIDNSQGGARTRWLTYWAVFGMYWYFQIALASLLAWLPFANHAQLALLLWLQLPVFRGSYYVL 548
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A6H5K644_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K644_9PHAE) HSP 1 Score: 141 bits (356), Expect = 4.750e-36 Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 1120 LVVPAFNSIKTLGRRSN-AELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLEFGERCMDRWASSPVAVSAPLSP 1452
L+ P KTLGRRSN + +S W+ALATSA ARVRWLTYWVAYG WWH +G +LRV+PL HA+LA+L WLQ+P FRGG R+L+FGERCMDRW S P+ P
Sbjct: 21 LLAPIAALSKTLGRRSNNSAVSTAWAALATSANIARVRWLTYWVAYGSWWHLSLCVGGILRVLPLAAHAELALLLWLQVPLFRGGDRILDFGERCMDRWTFGSDVASTPVRP 132
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A7S2V8D4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D4_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.740e-28 Identity = 80/233 (34.33%), Postives = 116/233 (49.79%), Query Frame = 1
Query: 706 AQDVDRVLMYWVVFTV-ASC---WGWAADIVPENRLTPHVRTITFFVALWMHLPGPGSGLQVVYASLEPLVHKYVRDLRMP--DNGHVGTLKSLRNVLVFARLLTEEHAEVLASNISDSWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLE 1386
A + + LMYWV+F C W A +P+ P + FF +WM LP G+ +++ LEPL+ KY++D++ P +G LK V V L+++E L SN+ DSW+LVP LL PS T LY G VPAFNSIK+L + RWL YW+ Y +W +L L +P + H L ++ WLQ+P+FRG R+++
Sbjct: 4 AGRLQQCLMYWVLFAAFVLCNYLWSTFAWRLPQM---PCGAEMVFFFFVWMQLPF--GGVSILFHQLEPLIRKYIKDIKRPIGKEESLGYLK----VAVTLGLISKERGHALVSNLLDSWLLVPALLGLTMPSPFTYAFSLYAGAAVPAFNSIKSLKAEQEGPNQE--------------RWLRYWMCYAPFWVVHLALDSHLWFVPFLYHFWLLLVMWLQLPYFRGAQRIVQ 213
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A6G0XFJ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFJ3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 7.470e-14 Identity = 67/230 (29.13%), Postives = 106/230 (46.09%), Query Frame = 1
Query: 718 DRVLMYWVVF----TVASCWGWAADIVPENRLTPHVRTITFFVALWMHLPGPGSGLQVVYASLEPLVHKYVRDLRMPDNGHVGTLKSLRNVL-VFARL--LTEEHAEVLASNISDSWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLE 1386
+RVL WV++ T +C G VP + P +R T ++ L+++ G Q +YA+L +H Y ++ +S VL A L L+ A VL S L GL+ P F+T++GC VGL PA+ + +L ++ R R W+ Y+ L+ + C ++ +L IPL+ HA+L L WLQ P+FRG R+ +
Sbjct: 290 ERVLKLWVLWSFYRTSVTCAGLFLAFVP-GFILPSMRPSTIYLNLFLNWIHSLKGDQKLYAALTSYMHPYATQIQTVQAAAAANSESSNLVLRTLASLGVLSTNTANVLRDLRSQGPALF-GLIFLVMPGFLTKVGCDLVGLAFPAYVVM---------------GSLLSNERRTREWWVCYFTVVALFEYWCDAISGILAWIPLIYHAKLLALVWLQFPYFRGAQRIFD 502
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: M4BDE5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDE5_HYAAE) HSP 1 Score: 78.6 bits (192), Expect = 5.730e-12 Identity = 97/401 (24.19%), Postives = 164/401 (40.90%), Query Frame = 1
Query: 223 VFVGAVLLRRFIVRQRYLPRARRRVRLFRQRVNRAYVSFTASIERKFRLSARLFPHLVYWTAA-GLFAWLAPEAAGHLRDN-LWVLATTAWPTMYAIYLVLVLRSQHRSAGEDGVRAGGAGVGTPGADSTSAS---VTRRTSARAPGAGTPARAPGSGLARPGNVMAQDVDRVLMYWVVFTVASCWGWAADIVPENRLTPHVRTITFFV---ALWMHLPGPGSGLQVVYASLEPLVHKYV-----RDLRMPDNGHVGTLKSLRNVLVFARLLTEEHAEVLASNISDSWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGWVLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLE 1386
+ AV+ VRQ Y+ +AR + ++++ Y F AS+ K+R+ A+L PH++++ + + WL L + L++L + +P ++ I ++ +H+ V++ P A + VT+ + PG G A +V + YWV+++ A C + +T F LWMH G +Y L PL+ Y R+ + T +R + F R++ E H LA ++ + GL+ FTP F+ GCL +G PA+ +I L + + W A A +A A G +GW +PL H +L V+ WLQ P+F+G RL
Sbjct: 8 LLAAAVIFAAVCVRQGYVHKARVQYYTTKRKLELRYRMFVASLSAKWRVVAKLLPHVLFFALSFEVLYWLPDSTTNVLGGSALFMLLSVGYPLLHTIRVI-----RHKRFNLKHVKS------APPASKSGRPRQLVTKFDNVCVPG---------------GEWRAYEV--CMKYWVIWSFAVCLTSILTLFLPAFVTSFCTVPLQFCNVFLLWMHSSFT-RGTIALYTLLSPLISPYASRLHEREATVDAEADEKTNFVIRLFVSF-RVVPERHVH-LAKDLWSQGPALFGLIFLFTPGFVACRGCLLMGFGFPAYVTIGVLSEKRTRRY-EWWLAYFCVAITANY----LMTAIGQ------EIGW----LPLFYHVKLLVMMWLQFPYFQGAERLFN 362
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A7S2FA21_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FA21_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.020e-8 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 1075 FTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRWLTYWVAYGLWWHACWSLGW-----VLRVIPLVGHAQLAVLFWLQIPWFRGGFRLLEFG 1392
FTP FITR+GCL VGLV PAF ++ + + +++ D +A + +RWL YWV Y ++ LG +L ++P H L L WLQ+P+ RG + E G
Sbjct: 5 FTPWFITRVGCLLVGLVYPAFCAVLLIHKAESSKEKD-------AASLSMIRWLKYWVVYAVYMSLGQELGRSSLNDLLFMVPQ-NHVNLVFLVWLQLPFCRGAPLVYEKG 107
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Match: A0A7S0PT42_9CHLO (Hypothetical protein n=3 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PT42_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 1.520e-5 Identity = 51/180 (28.33%), Postives = 83/180 (46.11%), Query Frame = 1
Query: 868 GLQVVYASLEPLVHKYVRDLRMPDNGHVGTLK-----SLRNVL---VFARLLTEEHAEVLASNISD--SWMLVPGLLCFFTPSFITRLGCLYVGLVVPAFNSIKTLGRRSNAELSDGWSALATSARSARVRW-------LTYWVAYGLWWHACWSLGW-VLRVIPLVGHAQLAVLFWLQI 1353
G +++ + PLV + + + +G +G L+ S+R L VF + A + D S+ LV + FFTP +T GC GLV+P +I +L + + ++ A + R LTYW+A+ + W L LR +PL+ HAQLA ++WLQ+
Sbjct: 346 GSELIVDAATPLVSRAMAYANV-SSGAMGQLRTVVRASVRQTLQIGVFVMRFRSKRASDALRLVLDNMSFPLVTCTIFFFTPGLMTVYGCDIAGLVIPFIFTIDSLNEYYKFKATPEVASRAEMRKETEKRHEDKLRNLLTYWLAHAMIWSLSQELSTSALRWVPLLRHAQLAGIYWLQV 524 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11640.1448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11640.1448.1 >prot_H-canaliculatus_F_contig11640.1448.1 ID=prot_H-canaliculatus_F_contig11640.1448.1|Name=mRNA_H-canaliculatus_F_contig11640.1448.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=326bp MYAIYLVLVLRSQHRSAGEDGVRAGGAGVGTPGADSTSASVTRRTSARAPback to top mRNA from alignment at H-canaliculatus_F_contig11640:241..3939- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11640.1448.1 ID=mRNA_H-canaliculatus_F_contig11640.1448.1|Name=mRNA_H-canaliculatus_F_contig11640.1448.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3699bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11640:241..3939- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11640:241..3939- >mRNA_H-canaliculatus_F_contig11640.1448.1 ID=mRNA_H-canaliculatus_F_contig11640.1448.1|Name=mRNA_H-canaliculatus_F_contig11640.1448.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1956bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11640:241..3939- (Hapterophycus canaliculatus Oshoro5f female)back to top |