prot_H-canaliculatus_F_contig11637.1444.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11637.1444.1
Unique Nameprot_H-canaliculatus_F_contig11637.1444.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length69
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11637.1444.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 2.750e-12
Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:   24 TEVPPEVLELIRANQLASDWNGNPWSRPPLTVLSSGLESALGWWND 69
            TE+PPEVLEL R       W+ NPWSRPP TVL SG E ALGWW D
Sbjct:  226 TEIPPEVLELCREILGEPSWHANPWSRPPSTVLESGFERALGWWED 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11637.1444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKS5_ECTSI2.750e-1265.22LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..62
e-value: 2.8E-5
score: 25.2
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11637contigH-canaliculatus_F_contig11637:1756..2723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11637.1444.1mRNA_H-canaliculatus_F_contig11637.1444.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11637 1754..2723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11637.1444.1 ID=prot_H-canaliculatus_F_contig11637.1444.1|Name=mRNA_H-canaliculatus_F_contig11637.1444.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=69bp
GPIPATLGKLAALGMLDIRDNQLTEVPPEVLELIRANQLASDWNGNPWSR
PPLTVLSSGLESALGWWND
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf