prot_H-canaliculatus_F_contig1161.1417.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1161.1417.1
Unique Nameprot_H-canaliculatus_F_contig1161.1417.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length181
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1161.1417.1 vs. uniprot
Match: D8LTN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN6_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.940e-44
Identity = 93/149 (62.42%), Postives = 111/149 (74.50%), Query Frame = 0 
Query:   11 LAPILLASLSRLRRAEGVFVSRGGGVAGLPPSVELPISGGAGEGDGNQENQPPIGEVVGAGAVGVLAGQVVFQSLVISVGLGVASMSVAASSADAPGEIARSSGRMAVAVLDRVTQLNSRYQLTDRVVDGAKMAGWRLRKFDQEHAVVH 159
            L   LLASL    RAE V + RGGG +G PPS +   +G  G  D   ++ PPI EVVGAGAVGVLAGQ+VFQSL+IS GLGV +M++AASSAD  G+IARSSGRMAVA  DR   LN RY  T+R+V+GAK+ GWRL++FDQEHAVVH
Sbjct:    7 LLSALLASLVHFPRAERVLLFRGGGPSGSPPS-KTRATGSRGLSD--DDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVH 152
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1161.1417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN6_ECTSI1.940e-4462.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1161contigH-canaliculatus_F_contig1161:4369..7108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1161.1417.1mRNA_H-canaliculatus_F_contig1161.1417.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1161 2913..7382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1161.1417.1 ID=prot_H-canaliculatus_F_contig1161.1417.1|Name=mRNA_H-canaliculatus_F_contig1161.1417.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=181bp
MRCSPSSFPLLAPILLASLSRLRRAEGVFVSRGGGVAGLPPSVELPISGG
AGEGDGNQENQPPIGEVVGAGAVGVLAGQVVFQSLVISVGLGVASMSVAA
SSADAPGEIARSSGRMAVAVLDRVTQLNSRYQLTDRVVDGAKMAGWRLRK
FDQEHAVVHRATQGTKKAWQDAQEVRATIV*
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