prot_H-canaliculatus_F_contig11495.1320.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11495.1320.1
Unique Nameprot_H-canaliculatus_F_contig11495.1320.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length88
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11495.1320.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.340e-30
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:    1 DYLVSERRYNESVRRAWKPSERVMMEWKEEE--EEGEEAVLKAYFGVVVKLERDHSGS---------EHWPNSPWGCLHIKWDMDGSTNSLGPWEPRPV 88
            D+LVSERRYNESV R W+PSERVMMEWKE E  EEGE  VLK YFGV+V+L    +G            WPNSPW CL I+WD+D + +SLGPWEPRPV
Sbjct: 1439 DFLVSERRYNESVGRNWRPSERVMMEWKEGEDGEEGE-GVLKPYFGVMVRLGMAGAGGAGGAQSSSRNDWPNSPWDCLSIRWDLDNTISSLGPWEPRPV 1536
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BLAST of mRNA_H-canaliculatus_F_contig11495.1320.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.660e-30
Identity = 59/98 (60.20%), Postives = 69/98 (70.41%), Query Frame = 0 
Query:    1 DYLVSERRYNESVRRAWKPSERVMMEWKEEEE-EGEEAVLKAYFGVVVKLERDHSGS---------EHWPNSPWGCLHIKWDMDGSTNSLGPWEPRPV 88
            D+LVSERRYN+SV R W+PSERVMMEWKE E+ E  E VLK YFG VVK+    +G            WPNSPW CL I+WD+D + +SLGPWEPRPV
Sbjct: 1398 DFLVSERRYNKSVGRNWRPSERVMMEWKEGEDGEDGEGVLKPYFGAVVKIGMAGAGGGGGTQPLSRNDWPNSPWDCLSIRWDLDNTISSLGPWEPRPV 1495
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BLAST of mRNA_H-canaliculatus_F_contig11495.1320.1 vs. uniprot
Match: A9UPA3_MONBE (Uncharacterized protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UPA3_MONBE)

HSP 1 Score: 50.1 bits (118), Expect = 4.940e-5
Identity = 29/93 (31.18%), Postives = 46/93 (49.46%), Query Frame = 0 
Query:    1 DYLVSERRYNESVRRAWKPSERVMMEWKEEEEEGEEAVLKAYFGVVVKLERDHSGSEHWPNSPWGCLHIKWDMDGSTNS-----LGPWEPRPV 88
            D++V   RY  +V   W+P  R          +GE+     ++G V  LE   S  + +P+SPW C  ++WD+DG+  +     L PWE  P+
Sbjct:  859 DFVVLRGRYENAVATQWQPGHRFSATI-----DGEQ-----WYGTV--LEVSPSDPQRFPDSPWRCCVVRWDVDGTGEAWPDERLNPWEMTPL 939
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11495.1320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEP1_ECTSI1.340e-3062.63WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5KTA2_9PHAE4.660e-3060.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A9UPA3_MONBE4.940e-531.18Uncharacterized protein n=1 Tax=Monosiga brevicoll... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010525Auxin response factorPFAMPF06507Auxin_respcoord: 1..67
e-value: 7.2E-7
score: 29.4
NoneNo IPR availableGENE3D2.30.30.1040coord: 18..88
e-value: 3.0E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11495contigH-canaliculatus_F_contig11495:2804..3067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11495.1320.1mRNA_H-canaliculatus_F_contig11495.1320.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11495 2804..3067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11495.1320.1 ID=prot_H-canaliculatus_F_contig11495.1320.1|Name=mRNA_H-canaliculatus_F_contig11495.1320.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=88bp
DYLVSERRYNESVRRAWKPSERVMMEWKEEEEEGEEAVLKAYFGVVVKLE
RDHSGSEHWPNSPWGCLHIKWDMDGSTNSLGPWEPRPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010525Auxin_resp