mRNA_H-canaliculatus_F_contig11428.1259.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI) HSP 1 Score: 276 bits (706), Expect = 5.650e-93 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG
Sbjct: 38 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 167
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A7S2RFE4_9STRA (GTP-binding nuclear protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFE4_9STRA) HSP 1 Score: 266 bits (679), Expect = 8.090e-89 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKL G
Sbjct: 40 ATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLSG 169
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA) HSP 1 Score: 265 bits (676), Expect = 2.240e-88 Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL G
Sbjct: 39 ATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSG 168
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.360e-87 Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEVRPL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVP WHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVG
Sbjct: 37 ATLGVEVRPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVG 166
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A7S3P9E4_9STRA (GTP-binding nuclear protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9E4_9STRA) HSP 1 Score: 261 bits (666), Expect = 7.460e-87 Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL G
Sbjct: 39 ATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSG 168
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: B6RB29_HALDI (GTP-binding nuclear protein n=3 Tax=Haliotis TaxID=6452 RepID=B6RB29_HALDI) HSP 1 Score: 260 bits (665), Expect = 1.250e-86 Identity = 120/130 (92.31%), Postives = 126/130 (96.92%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR+TYKNVPNWHRDL RVCE++PIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYD+SAKSNYNFEKPFLWLA+KLVG
Sbjct: 45 ATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENVPIVLCGNKVDIKDRKVKAKTITFHRKKNLQYYDVSAKSNYNFEKPFLWLARKLVG 174
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A7S1UW08_9STRA (GTP-binding nuclear protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1UW08_9STRA) HSP 1 Score: 261 bits (667), Expect = 2.850e-86 Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL G
Sbjct: 90 ATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLVGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSG 219
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A7R9ZLZ6_9STRA (GTP-binding nuclear protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLZ6_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.360e-86 Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL G
Sbjct: 95 ATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSG 224
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A0X3PW66_SCHSO (GTP-binding nuclear protein n=4 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A0X3PW66_SCHSO) HSP 1 Score: 258 bits (660), Expect = 5.920e-86 Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+G
Sbjct: 38 ATLGVEVHPLTFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 167
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Match: A0A224XK22_9HEMI (GTP-binding nuclear protein n=26 Tax=Neoptera TaxID=33340 RepID=A0A224XK22_9HEMI) HSP 1 Score: 258 bits (659), Expect = 8.400e-86 Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 1
Query: 13 ATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVG 402
ATLGVEV PL FHTNRGPI+FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+G
Sbjct: 39 ATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11428.1259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11428.1259.1 >prot_H-canaliculatus_F_contig11428.1259.1 ID=prot_H-canaliculatus_F_contig11428.1259.1|Name=mRNA_H-canaliculatus_F_contig11428.1259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=135bp CRTPATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAback to top mRNA from alignment at H-canaliculatus_F_contig11428:387..2117- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11428.1259.1 ID=mRNA_H-canaliculatus_F_contig11428.1259.1|Name=mRNA_H-canaliculatus_F_contig11428.1259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1731bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11428:387..2117- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11428:387..2117- >mRNA_H-canaliculatus_F_contig11428.1259.1 ID=mRNA_H-canaliculatus_F_contig11428.1259.1|Name=mRNA_H-canaliculatus_F_contig11428.1259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=810bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11428:387..2117- (Hapterophycus canaliculatus Oshoro5f female)back to top |