prot_H-canaliculatus_F_contig10086.113.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10086.113.1
Unique Nameprot_H-canaliculatus_F_contig10086.113.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length266
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10086.113.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.510e-37
Identity = 99/140 (70.71%), Postives = 101/140 (72.14%), Query Frame = 0 
Query:  126 SGLEPGWYXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXTVLWDDDYRALRARLEVPSLGFGSLRTPGQAGGVGXXXXXXXXXXXXXXXGLSLRSRLCEDLSRFLHMVTERERRTFDAKWVAYQRCRAVVRGLWPRAQV 265
            SG+EPGWY      G       XXXXXXXXXXXXXX     V WDDDY ALRARLEVPSLGFGSLR PGQ G  G               GLSLRSRLCEDLSRFLH+VTERERRTFDAKWVAYQRCRAVVRGLWPRAQV
Sbjct: 1574 SGVEPGWYNGGV--GWPAGTGVXXXXXXXXXXXXXXGSVGPVPWDDDYLALRARLEVPSLGFGSLRPPGQGGPAGGHKRGRSAGGGGQG-GLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCRAVVRGLWPRAQV 1710
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10086.113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHG7_ECTSI2.510e-3770.71LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10086contigH-canaliculatus_F_contig10086:617..2223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10086.113.1mRNA_H-canaliculatus_F_contig10086.113.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10086 118..2223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10086.113.1 ID=prot_H-canaliculatus_F_contig10086.113.1|Name=mRNA_H-canaliculatus_F_contig10086.113.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=266bp
GGGGGGGGAGGYNGFRLTAPVFVPEQFTPPGAGGGSILPRTAQQPPPPPT
HQLPSPNHQQQQSPRRQQSPQHHQHPQQQRQHQGIAAQGGVASISGGGHD
RAPPARAPADAGGYAAAAPAGGGGGSGLEPGWYGGGGGAGGWAGSTGGPG
GGVGGVGVGAGGSGGTVLWDDDYRALRARLEVPSLGFGSLRTPGQAGGVG
GSSKRGGRGGGGGQGGLSLRSRLCEDLSRFLHMVTERERRTFDAKWVAYQ
RCRAVVRGLWPRAQV*
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