prot_H-canaliculatus_F_contig1124.1119.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1124.1119.1
Unique Nameprot_H-canaliculatus_F_contig1124.1119.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length1158
Homology
BLAST of mRNA_H-canaliculatus_F_contig1124.1119.1 vs. uniprot
Match: D8LQQ9_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ9_ECTSI)

HSP 1 Score: 892 bits (2305), Expect = 1.420e-294
Identity = 632/1181 (53.51%), Postives = 728/1181 (61.64%), Query Frame = 0
Query:   50 EVQLDGVKSGVYTLAQGLCSNHGLTSLDLAANELDEYAGQELXXXXXXXXXXXXXXXTGNSRIPDEWLREHHKICSEVYGILPSLSESLRLNRVRRNANGAGAQGSGLGVRASPRTAHLEKTRAREARAXXXXXXXXXXXXXXXXXXXXXXXXXXT---------------------------------------------------RSKESGGEEAKGE---------RSELSREEDGEDGRGGTVLRDVGGGRGEDAGLLGVEGSKSASVVPDEQQLSRGKRRRHHSRSSTRLKLPTAVEVAAAESDAASKDKVGAGSHTGRTRRGRKHHALPPLPQSPVPSTFPLERIEGGVGQEARAGGDEAGEXXXXXXXXXXXXXXXXXXXXXXXXDACAPKNRFDESSSQLSRTLVDAAAAAAXXXXXSVLGASDVRKHGGVDVFGAGDGIRRAPGVWTRRGVWAPANELAEDRTRVEEQRTGDRQRQIREDEAMREAGEAKREELLEYLSTSDGEVLVARVAKLLVHAQREEARVSERTRAAELRALKLRRKQALKMSAGQRLGYSGTGGTDGGISILTRTRPLWLTAPWARNANSQNL-GEAGA--------TVAAAGIDSFRGTALAGG-YGNRPTVKVDW-ELPLSEGGRSHATLGGLDSLASSGTAASSLPSATAAAAMEEEDEVEIQRALGELREDKRAWDLKHRPPFLRTFGRFDPEGRGEILASDIGDLMAQLLLPEAVRPEEVKKITAELTKISDQERKAEKAALERAARRSGLHHAPPSPRPFTLGSGGRTVRMALVWRWHRREHMQWEPSFTAPSRKELRRLASQQRRRERTGEVARDWARRVILAVGEREARLETVERFRGITPPRFVCPVCHEFGCSTADGLNEHLRDASWHDVNAALQERFEENADMVAVARRAGGAGSYPEYFHIARDMPEETELQVHEEPSEISRPLGTITFEMLVLALGEEGDWLKINFESHEGVYVKHTTTTDPKRGRPQRHRTVVTRMTLPAARAASKVAASTAHLSATT-------TGALASTLARPITFAASGLSTLGRATLSTLSSFSYSLHHAGASRPAREPEALAPGTAVFKPRVVRFVLPRVYCQARGLPDGVMLKVRTEPGGAEGYRPGFGGDREGE----GGHVLGRIGADQCVIGLATSGDWLQAR 1148
            EV+  GVKSG+YTLAQGLC+N  LTSLDLAANELDEYAGQEL  XXXXXXXXXXXXX   + +PDEWLREHHKICSEVY ILPSL+ESLRLNR RR         + +G RASPRT HLE+TRA+EARA   XXXXXXXXXXXXXXXXXXXXXXX                                                    R K SGG   +GE         R + S   +       T  R  G G   D+    ++   S     DE    RGKRRR    +    +  TAV  +   S  +   K    S     RR R+    P  P SP   +        G G + ++GG  A E                                                         ++ GA+              DGIRR PGVWTRRGVWAPAN+LAEDR RVE +R GDRQRQ+REDEA+ EAG AKREE+LEYLST+DGE LVARVA +LVHAQREE R ++R R  EL+AL L RK+   M+  +R    G GG        TRT P WL A W  NA S    GE+ A        T A AG      TA A G     P  K  W E  +SE   +  +LGGL SL S+   +SSLPS  AA+ MEEEDE EI+R+L E+++ K+AWD+KHRPPFL+ FGRFDPEGRGE+LASDIGDLMAQL LPEAVRPEEVKK+ A+LTKI+D+ERKA +AA ERA RRSGL     +PRPFT GSG +TV M  +WRWHRREH+QW PSFTAPSRKELR+L ++QR+RER GEV+RDWARRVIL VGEREARL+  ERFRG+ PPRFVCP CHEFGCST D L+EHL D  WH VNAALQERFEENAD+VAVARRAGG+ S+PEYFH+AR+MPEETELQVHE+                            INF+SH GVYVKHT   D K+G  +R R V+TRMTLP AR+A+K+AASTAHLSAT         G LASTLARP+T A+SGLSTLG A  + L + +Y+LHH GA  P REPEALAPGTAVFKPRVVRF+LPRVYC A GLP G MLKVRTEPGGAEG R G+GG    E    GGHVLGRIGADQCVI  ATSGDWLQ +
Sbjct:  857 EVEPTGVKSGIYTLAQGLCTNRALTSLDLAANELDEYAGQELAHXXXXXXXXXXXXXXXXN-VPDEWLREHHKICSEVYDILPSLAESLRLNRARRTD-----LITTIGRRASPRTIHLERTRAKEARASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGGTDKEARRVHEEKAGGSDEWREKPSGGLSGEGEGLVSGRKNRREKESNACEAPPISANTAGRVPGAGTEGDSVEEAMKTKPSVPTTADEPTPVRGKRRRRDQGTGVHAEQSTAVATSGVSSPVSGGGKARVDSSP--PRRLRRQRERPTRPASPSALSTRGRGAGEGRGHDRKSGGATAEEE--------------------------------------------------------AMEGAA------------GSDGIRRVPGVWTRRGVWAPANKLAEDRARVEGRRIGDRQRQLREDEAVHEAGAAKREEVLEYLSTTDGEALVARVAAVLVHAQREEDRATKRERKEELQALTLHRKRKALMT--KRRHSDGPGGLL--TLTATRTLPSWL-AGWTGNAKSLRYSGESPAGPVPKMTATEATAGNAMPALTAAATGPKAAGPAKKAGWGETAVSE---AEESLGGLVSLVST---SSSLPSFAAASQMEEEDEEEIKRSLREMQDGKKAWDVKHRPPFLKVFGRFDPEGRGEMLASDIGDLMAQLRLPEAVRPEEVKKVAAQLTKIADEERKAVQAARERAIRRSGLDQGTSAPRPFTTGSGEKTVCMTHLWRWHRREHLQWRPSFTAPSRKELRQLNNRQRKRERWGEVSRDWARRVILVVGEREARLQAAERFRGLDPPRFVCPECHEFGCSTPDALDEHLGDEPWHAVNAALQERFEENADIVAVARRAGGSHSFPEYFHVAREMPEETELQVHEDA---------------------------INFKSHRGVYVKHTMA-DTKKGS-RRRRVVMTRMTLPPARSAAKIAASTAHLSATAGGGGVGGVGTLASTLARPVTLASSGLSTLGHAAATGLQALAYTLHHGGARPPPREPEALAPGTAVFKPRVVRFLLPRVYCHAAGLPAGTMLKVRTEPGGAEGERGGWGGHGGEEAVEGGGHVLGRIGADQCVIAHATSGDWLQVQ 1921          
BLAST of mRNA_H-canaliculatus_F_contig1124.1119.1 vs. uniprot
Match: A0A6H5KGV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV7_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 2.740e-89
Identity = 191/380 (50.26%), Postives = 231/380 (60.79%), Query Frame = 0
Query:  517 REEARVSERTRAAELRALKLRRKQ-ALKMSAGQRLGYSGTGGTDGGISILTRTR--PLWLTAPWARNANS-QNLGE--AGATVAAAGIDSFRGTALAG--GYGNRPTVKVDW-ELPLSEGGRSHATLGGLDSLASSGTAASSLPSATAAAAMEEEDEVEIQRALGELREDKRAWDLKHRPPFLRTFGRFDPEGRGEILASDIGDLMAQLLLPEAVRPEEVKKITAELTKISDQERKAEKAALERAARRSGLHHAPPSPRPFTLGSGGRTVRMALVWRWHRREHMQWEPSFTAPSRKELRRLASQQRRRERTGEVARDWARRVILAVGEREARLETVERFRGITPPRFVCPVCHEFGCSTADGLNEHLRDASWHDVNAALQ 887
            ++E R ++R R  EL+AL LRRK+ AL M      G        GG+  LT TR  PLWLT  W  NA   ++ GE  AG        ++  G A+         P  K  W E  + E   +  +LGGL SL S+    SSLPS  AA+ M      EI+R+L E++++K+AWD KHRPPFL+ FGRFDPEG GE+LASDIGDLMAQL LPEAVRPEEVK + A+LTK+                                         M  +W+WHRREH+QW PSFTAPS KELR+L ++QR+RER+GEV+RDWARRVIL VGEREARL+  ERFRG  PPRFVCP CHEFGCSTAD L+EHL D  WH VNAALQ
Sbjct:    4 KDEDRATKRKRKEELQALTLRRKRTALTMKRRHNDG-------PGGLMALTATRKLPLWLT-DWTGNAKPPRHSGESTAGPVAKMTATEATAGNAMPALTVAATGPPKKAGWGETAVPE---AEESLGGLASLVST---TSSLPSFAAASQMXXXXXXEIKRSLREMQDEKKAWDAKHRPPFLKVFGRFDPEGLGEMLASDIGDLMAQLRLPEAVRPEEVKNVAAQLTKVC----------------------------------------MTHLWKWHRREHLQWRPSFTAPSHKELRQLNNRQRKRERSGEVSRDWARRVILVVGEREARLQAAERFRGFHPPRFVCPECHEFGCSTADALDEHLGDEPWHAVNAALQ 329          
BLAST of mRNA_H-canaliculatus_F_contig1124.1119.1 vs. uniprot
Match: A0A6H5KN13_9PHAE (AMPK1_CBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN13_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.800e-31
Identity = 198/521 (38.00%), Postives = 232/521 (44.53%), Query Frame = 0
Query:    4 AGLLSRNGSIECLDLAFNQVGPEGLRRLSGFLFQNARLEILGLRGCEVQLDGVKSGVYTLAQGLCSNHGLTSLDLAANELDEYAGQELXXXXXXXXXXXXXXXTGNSRIPDEWLREHHKICSEVYGILPSLSESLRLNRVRRNANGAGAQGSGLGVRASPRTAHLEKTRAREARAXXXXXXXXXXXXXXXXXXXXXXXXXXTRSKE-------------------SGG--------EEAKGERSELSREE--DGEDGRGG---------------TVLRDVGGGRGEDAGLLGVEGSKSASVVPDEQQLSRGKRRRHHSRSSTRLKLPTAVEVAAAESDAASKDKVGA-GSHTGRTRRGRKHHALPPLPQSPVPSTFPLERIEGGVGQEARAGGDEAGEXXXXXXXXXXXXXXXXXXXXXXXXDACAPKNRFDESSSQLSRTLVDAAAAAAXXXXXSVLGASDVRKHGGVDVFGAGDGIRRAPGVWTRRGVWAPANELAEDRTRVEEQRTGDRQRQIREDE 479
            A LL RNG+IE LDLA+N +GPEGLRRLSGFL++N  LE LGLRGCEV+  GVKSG+YTLA                                                             EVY ILPSL+ESLRLNR RR         + +G RASPRT HLE+TRA+EA A   XXXXXXXXXXXXXXXXXXXXXXX                        SGG         E K  RS+  RE+   G  G G                T  R  G G   D+    ++   S     DE    RGK +R    +S   + PTAV  +   S  +   K G   S   R RR R+    P LP +                   R  G+                XXXXXXXXXXXX             S  + T V+  AA             D  +   ++     DG+RR PGVWTRRGVWAPAN+LAEDR RVEE+R GD QRQ+REDE
Sbjct:  527 AELLLRNGAIETLDLAYNPIGPEGLRRLSGFLWKNTSLETLGLRGCEVEPAGVKSGIYTLAH------------------------------------------------------------EVYDILPSLAESLRLNRTRRTD-----LITTIGRRASPRTIHLERTRAKEACASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGGTDKEARRVHEEKAGRSDEWREKASSGLSGEGKEKESNVCEAPPISNITARRVPGAGIKGDSAQGAMKTKPSVPTTADEPSPVRGKHQRRDLGTSVHAEQPTAVATSGVRSPVSGGGKAGVDNSPPRRLRRQRERPTQPALPSA----------------LWTRGKGEXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXSTTAATAVNTGAATV-----------DAAEEEAMEGATGSDGVRRVPGVWTRRGVWAPANKLAEDRARVEERRVGDWQRQLREDE 941          
BLAST of mRNA_H-canaliculatus_F_contig1124.1119.1 vs. uniprot
Match: A0A836CJN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.010e-20
Identity = 83/288 (28.82%), Postives = 129/288 (44.79%), Query Frame = 0
Query:  861 EFGCSTADGLNEHLRDASWHDVNAALQERFEENADMVAVARRAGGAGSYPEYFHIARDMPEETELQVHEEPSEISRPLGTITFEMLVLALGEEGDWLKINFESHEGVYVKHTTTTDPKRGRPQRHRTVVTRMTLPAARAASKVAASTAHLSATTTGALASTLARPITFAASGLSTLGRATLSTLSSFSYSLHHAGASRPAREPEALAPGTAVFKPRVVRFVLPRVYCQARGLPDGVMLKVRTEPGGAEGYRPGFGGDREGEGGHVLGRIGADQCVIGLATSGDWLQAR 1148
            E G S+   L+EH +D  +H+   AL  R +  AD++    R     +YP+Y+ +AR +P ETEL V++    +SRPLG +T +M + AL  +G W++INF+ H+GV+V++        G       ++TRM LP  + A   AA+   L A   G                                  L          EP +L    A + P V+R+  P  +  + G P+GV LK+R+ P G                  VLG +  ++ V+  A +GDWLQ +
Sbjct: 1497 EVGISSRRRLDEHQKDMVFHNAYRALAARMDYLADVIETCTRDVVPMTYPDYYQVARSLPGETELPVYQAADTLSRPLGNVTCDMTIEALAHDGQWMQINFKGHKGVWVRYKGEAGVLTGGGG---ILLTRMPLPPRKPA---AAAKIQLQALRMG----------------------------------LRRLKPGLEPPEPPSLDVRAAGYSPHVIRYPGPVPFRCSAGAPEGVRLKIRSNPSGDA---------------QVLGFLSHEEGVMASAEAGDWLQVQ 1729          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1124.1119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQQ9_ECTSI1.420e-29453.51Hypothetical leucine rich repeat calcium binding p... [more]
A0A6H5KGV7_9PHAE2.740e-8950.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN13_9PHAE3.800e-3138.00AMPK1_CBM domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CJN6_9STRA1.010e-2028.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..196
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 38..69
e-value: 5.0
score: 12.2
coord: 10..37
e-value: 11.0
score: 9.8
coord: 70..97
e-value: 7.2
score: 11.1
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 3..111
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 3..111
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..128
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..130
e-value: 2.1E-20
score: 74.5
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 12..31
e-value: 0.15
score: 12.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1124contigH-canaliculatus_F_contig1124:18866..30109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1124.1119.1mRNA_H-canaliculatus_F_contig1124.1119.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1124 18866..30109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1124.1119.1 ID=prot_H-canaliculatus_F_contig1124.1119.1|Name=mRNA_H-canaliculatus_F_contig1124.1119.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1158bp
QRLAGLLSRNGSIECLDLAFNQVGPEGLRRLSGFLFQNARLEILGLRGCE
VQLDGVKSGVYTLAQGLCSNHGLTSLDLAANELDEYAGQELAQALLKNKT
LTAIDLTGNSRIPDEWLREHHKICSEVYGILPSLSESLRLNRVRRNANGA
GAQGSGLGVRASPRTAHLEKTRAREARAAERNKRREAKRMRDAHARHRRR
VLRATRSKESGGEEAKGERSELSREEDGEDGRGGTVLRDVGGGRGEDAGL
LGVEGSKSASVVPDEQQLSRGKRRRHHSRSSTRLKLPTAVEVAAAESDAA
SKDKVGAGSHTGRTRRGRKHHALPPLPQSPVPSTFPLERIEGGVGQEARA
GGDEAGEGGEAKSKRSKKSPSPRAPTATTATDACAPKNRFDESSSQLSRT
LVDAAAAAAAAAAASVLGASDVRKHGGVDVFGAGDGIRRAPGVWTRRGVW
APANELAEDRTRVEEQRTGDRQRQIREDEAMREAGEAKREELLEYLSTSD
GEVLVARVAKLLVHAQREEARVSERTRAAELRALKLRRKQALKMSAGQRL
GYSGTGGTDGGISILTRTRPLWLTAPWARNANSQNLGEAGATVAAAGIDS
FRGTALAGGYGNRPTVKVDWELPLSEGGRSHATLGGLDSLASSGTAASSL
PSATAAAAMEEEDEVEIQRALGELREDKRAWDLKHRPPFLRTFGRFDPEG
RGEILASDIGDLMAQLLLPEAVRPEEVKKITAELTKISDQERKAEKAALE
RAARRSGLHHAPPSPRPFTLGSGGRTVRMALVWRWHRREHMQWEPSFTAP
SRKELRRLASQQRRRERTGEVARDWARRVILAVGEREARLETVERFRGIT
PPRFVCPVCHEFGCSTADGLNEHLRDASWHDVNAALQERFEENADMVAVA
RRAGGAGSYPEYFHIARDMPEETELQVHEEPSEISRPLGTITFEMLVLAL
GEEGDWLKINFESHEGVYVKHTTTTDPKRGRPQRHRTVVTRMTLPAARAA
SKVAASTAHLSATTTGALASTLARPITFAASGLSTLGRATLSTLSSFSYS
LHHAGASRPAREPEALAPGTAVFKPRVVRFVLPRVYCQARGLPDGVMLKV
RTEPGGAEGYRPGFGGDREGEGGHVLGRIGADQCVIGLATSGDWLQARRW
PGGEGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf