mRNA_H-canaliculatus_F_contig1008.110.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.250e-104 Identity = 151/213 (70.89%), Postives = 182/213 (85.45%), Query Frame = 2 Query: 719 FRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 ++ PI RLVSAYFYCKQ GWDELCASM++KAG+ DLHTFA+HWGNY +RQF+LAFVGA++VF+AEQ+RGI GRPVMFPGWYRVKEYFE + R+ ++ +GA NDLAM LLQPVEDLLS NYSAVG+LE+WE SMTLFN+ALKVP+F+W++AS++LGRKNVD RL EEA ALR+AWDDP + LWLDI LY+HAV+VHN+QV HGI Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.360e-67 Identity = 132/301 (43.85%), Postives = 184/301 (61.13%), Query Frame = 2 Query: 509 KAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKD--QTDKGAETRKHTITFGAYTEALRSRRG---QDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGS--IDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMF------PGWYRVKEYFEGLEGTAEARSFLRG-----SGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 KAGG+TVK ++ + + T+G Y + W+ KD Q G E ++ +GAYTE LR G ++CKWFT+FRHPI RLVSAYFYCK++ D LCA++ + A + DL+ FAEHWG++ +RQFALAFV +E+ + + +G + PGWY +K Y + E RG + A + LLQPV++LL++ Y+AVGVLEQWE S+ LFN AL +P FDW S+G+KN D EEA+ L +W DP + +L LD+LLY++AVSVHNQQV +G+ Sbjct: 3 KAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDEN---SLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 229 bits (584), Expect = 2.330e-65 Identity = 121/300 (40.33%), Postives = 172/300 (57.33%), Query Frame = 2 Query: 482 ECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAE-------QDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVD-YRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 +CW+F+H+ K+GG TV+ +I + +K + + + W + + + T+G YTE LR +DCKWFT+FRHP+SR+VSAYFYC++ D+LCA++++ A +DL TFAEHWGNY +RQFALA + A++VF E Q RG V P WYR K Y F + + LA L ++ LS Y+AVG++E+W+ SM LFNR L + FDW + G+KN + AL++AW P + +WLDILLY+HA+SVH QVA GI Sbjct: 51 DCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENA-VFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGD--VCIPAWYRQKHYLH----LPHQDDFCGPTQPESGLAQ--FLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 221 bits (564), Expect = 9.990e-63 Identity = 119/307 (38.76%), Postives = 176/307 (57.33%), Query Frame = 2 Query: 452 TVRALSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARND---LAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIKL 1363 T+ LS + CW+FTH KAGGTTVK +++ + T+ + W D+ + K + G Y E LR+ Q CKWFTM RHPI+RL+SA++YC D+LCA+ I K D++ FA+HWGNYA+ QFAL V E+F+ E D P W++ K YFEG G S ++ + + +LQPVE+LL NY+AVG+LE W+ SM LF+ AL++P F+W AS SL + ++ +++A L +A DP + ++WLD+LLY +A S+H +Q+ + + L Sbjct: 26 TLPELSLSTPTCWVFTHNNKAGGTTVKTHLRNYAESRNETVAL-CHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVDA---------PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAM-LAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLAL 321
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 218 bits (554), Expect = 2.600e-61 Identity = 125/306 (40.85%), Postives = 181/306 (59.15%), Query Frame = 2 Query: 464 LSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAET---RKHTITFGAYTEALRSRRGQ-DCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARN---DLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNV-DYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 LS +P CW++T + KAGGT+++ +I+ +T+G +T+ + + D+G + R+ ++ +GAYTE LR CKWFTM RHPI+RLVSA+ YC D+LCA+ I K D++ FAEHWGN+ V QFALAF +++ E V P WY+ K YFEG G + S ++ ++ M +LQPVE+LL Y+AVG+LEQWE SM LF+ AL++P F+W S S S +NV D + + + L ++ DP + LWLDILLY HA SVH Q++ +G+ Sbjct: 30 LSLSPPACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQY----NAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE---------VKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND---LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 221 bits (562), Expect = 8.410e-61 Identity = 125/318 (39.31%), Postives = 182/318 (57.23%), Query Frame = 2 Query: 455 VRALSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTD----KGAETRKHTITFGAYTEALRSRRGQD--CKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFV---GADEVFSAEQDRGISGRPVM-FPGWYRVKEYFE-------GLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 VRAL+S P +CW+F HL K GG+TVK +++ S S Y ++ W D + K A + G YTEALR D C++FT+FRHPI+R+VSAYFYC+ D CAS +V A +DL TFA+HWGN+AVRQFAL FV G E + + + + GWY++K Y E G+ G +EA + + A + + LLQP DL+ Y AVG+LEQW ++ LF+ AL++P W + G++ VDY+ ++ E++ L+ AW D + ++ LD+LLY HAV V ++Q +G+ Sbjct: 147 VRALAS-PDQCWVFMHLQKCGGSTVKYMLRRSYG---SRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 214 bits (544), Expect = 6.230e-59 Identity = 124/309 (40.13%), Postives = 173/309 (55.99%), Query Frame = 2 Query: 485 CWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKH----TITFGAYTEALRSRRG-------QDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEV--FSAEQD----RGISGRPV-MFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 CWIF HL KAGGTTVK L+ S + +T Y ++ W + + + A + + G Y EALR C+WFT+FRHP+SRLVSAY+YC++ D+LCAS V + ++DL TFA HWGN+A+RQFAL FV D+V F + G++ V + PGWY +K + G A+ S G R + + +PV DLL NY+ VG+LE W +++LF+ AL +P WR + G+ NVD R + E+ L+ A DP I HL LD+ LY AV + NQQ ++GI Sbjct: 88 CWIFNHLQKAGGTTVKRLLFDSWGSESTT---YDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTS---PEGTR----LEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 208 bits (529), Expect = 4.080e-56 Identity = 119/309 (38.51%), Postives = 172/309 (55.66%), Query Frame = 2 Query: 470 SAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDK-GAETR---KHTITFGAYTEALRSRR--GQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFE-------GLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357 ++P +CW+F HL K GG+TVK L++ S Y + W + + K GA+ K + G YTEALR G C++FT+FRHPI+R+VSAYFYC+ D CAS +++A +DL TFA+HWGN+A+RQFAL FV +D+V Y++K Y E G+ G EA + + + A D + LLQP DL+ Y AVG+LEQW ++ LF+ L +P +W G+ +VD +Q E + L+ AW D + ++ LD+LLY HAV V +QQ +HG+ Sbjct: 172 ASPGQCWVFMHLQKCGGSTVKDLLEDRWG---SRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-----------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 151 bits (381), Expect = 3.360e-35 Identity = 102/299 (34.11%), Postives = 150/299 (50.17%), Query Frame = 2 Query: 485 CWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFS-AEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQE------EAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIK 1360 CWIF H+ K+G + + + RK + W R D + G E+LR+ + + CKW T+FRHPI+RL+SAY +C + D +C S L FAE WGN+A+RQFAL V V A Q + +G + WY VKEY L G D + S+L+PV+ LLS Y+AVG+ ++ E +M LF++AL + DW S+ +LG ++ ++Q+ E++ R A ++P I L LD+ LY HA+ V QVA GI+ Sbjct: 273 CWIFMHMDKSGASGARRVATERWRKDELV---FDTVQWRRG-DGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM----WYLVKEY-------------LARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLG---INEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 144 bits (363), Expect = 3.890e-35 Identity = 92/241 (38.17%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 650 ITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFS-AEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQ---EEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIK 1360 + G E+LR+ +G+ CKW T+FRHPI+RL+SAY +C D +C S L FAE WGN+A+RQFALA V V A Q + +G + WY VKEY L G D + S L+PV+ LLS Y+AVG+ ++ + +M LF++AL + DW S+ +LG D + + E++ R A ++P I L LD+ LY HAV V QVA GI+ Sbjct: 46 LLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM----WYLVKEY-------------LARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1008.110.1 >prot_H-canaliculatus_F_contig1008.110.1 ID=prot_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=360bp MVGNPRSIMVHRGWARRLLCAGVGLFFATGSLESSGSCTSCNRSVSFANAback to top mRNA from alignment at H-canaliculatus_F_contig1008:15312..19093+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1008.110.1 ID=mRNA_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3782bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1008:15312..19093+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1008:15312..19093+ >mRNA_H-canaliculatus_F_contig1008.110.1 ID=mRNA_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2160bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1008:15312..19093+ (Hapterophycus canaliculatus Oshoro5f female)back to top |