mRNA_H-canaliculatus_F_contig1116.1044.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A6H5JM32_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM32_9PHAE) HSP 1 Score: 569 bits (1467), Expect = 1.260e-191 Identity = 277/320 (86.56%), Postives = 297/320 (92.81%), Query Frame = 1 Query: 919 GTGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIPSKMAS----NNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFGGSGGHYNANEDRRQGQR 1866 G G GE GVS QGL AWV+ERAPLLHHCLSTF+HTRCFLYGD R LGVEALPSCAAS+P SLAVF+PPRPQ+PS+LLD+H+AEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRER SGAVWGGCADSPWKESNSFYGGEASFL RL+PDFK+IP KMA N NFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDD CVGRSACLTFE GELCP QSR FEVDI+EVWGVGGE+A+GEALEAR+KQR+YTAAQIH+ARQVDKSKFATNAFDKEFLLGKTFGG+GGHYN N+DRR+G+R Sbjct: 9 GGGGNGEGGVSPQGLTAWVSERAPLLHHCLSTFIHTRCFLYGDARSLGVEALPSCAASLPPSLAVFSPPRPQQPSFLLDSHRAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGEASFLFRLAPDFKIIPHKMARRVQRNQNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDKCVGRSACLTFEQGELCPEQSRRFEVDILEVWGVGGEKAVGEALEARDKQREYTAAQIHKARQVDKSKFATNAFDKEFLLGKTFGGNGGHYNPNKDRRKGER 328
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: D7FR85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR85_ECTSI) HSP 1 Score: 373 bits (957), Expect = 2.290e-116 Identity = 206/293 (70.31%), Postives = 234/293 (79.86%), Query Frame = 1 Query: 409 RSLADAGGKHIDPPKFRKHFALEGADWFSERLLAVFLEGGEEPAGSGEGKLTLEGFREGVAATGRSSRAGMVQALYNICNPTGAASLNPAELARLFEAAYCCGVAASQPPRDLTPAATDGTSGTPDGTSGGSASGTAPVEGGSSPPSSSKEGLFRSDRLAESVKSHLSSA---------GTGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNR 1260 RSLADA GKHIDP KFR+HFALEGADWFS+RLLAVFLE G+ +GS GKL LEGFREGVA TGRSSR+GMVQALYNICNPTGA+SL+ +LARLFEAA+CC AA + +P TD T+ +G +++ T+ E S SSS+ FRSD+LAESV +HL SA G G GE GVS QGLKAWV+ERAPLLHHCLSTF+HTRCFLYGD R LGVEALPSCAAS+P SLAVF+PPRPQ+PS+LLD+H+AEIFGLALSTKALQGPWMRIYNSEEDGLSFNR Sbjct: 4 RSLADAEGKHIDPQKFREHFALEGADWFSDRLLAVFLEEGKVRSGSDAGKLDLEGFREGVALTGRSSRSGMVQALYNICNPTGASSLDQQQLARLFEAAHCCCTAAWR----RSPTTTDDTA------TGTASTSTSIPEVASG--SSSENSQFRSDKLAESVANHLGSARMGVSRIGPGGGGDGEGGVSPQGLKAWVSERAPLLHHCLSTFIHTRCFLYGDARSLGVEALPSCAASLPPSLAVFSPPRPQQPSFLLDSHRAEIFGLALSTKALQGPWMRIYNSEEDGLSFNR 284
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A835YL28_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL28_9STRA) HSP 1 Score: 300 bits (769), Expect = 1.040e-86 Identity = 195/551 (35.39%), Postives = 266/551 (48.28%), Query Frame = 1 Query: 415 LADAGGKHIDPPKFRKHFALEGADWFSERLLAVFLEGGE-----EPAGSGEGKLTLEGFREGVAATGRSSRAGMVQALYNICN----------------------------PTGAASLNPAELARLFEAAYCCGVAASQPPRDLTPAATDGTSGTPDGTSGGSASGTAPVEGGSSPPSSSKEGLFRSDRLAESVKSHLSSAGTGAIGEEG--------------VSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIPSKMASNNNFQYLNLK------------------------GFSLPHGFGMGGSTEAFRFFIPEALD-DTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFGGSGGHYNANEDR 1851 L + GG ++P F L WF+++L AV+ GGE G L+L F EG+A T R RA + L+N P G L+ LAR+F + G AA P +L F++ R+A ++ +H++S G ++ W AE AP LHH L T+M RCF DD+ +P S F PR +PS +L E+ GLA+ QGPW+R++ S+EDGLSFNR+ ++GYGGP+++++R+R SGAV GG A W+E N+FYGG SFL +LSP F+V SK AS N+ YLNLK GFSLPHG GMGG+ + FRFFIPE+ D + V +S C+TFE GELCP+ +R FE+D +EVWG+GGEEA+ L+AR + R A +++AR+VDK+KF N FD+EFLLGKTF G E+R Sbjct: 24 LTEEGGA-VNPEAFAAFVGLPELPWFAQQLAAVYATGGEGAEVSHSVAEGGVTLSLAAFGEGIANTCRGKRASALHILFNASRAQQGTEGERSPSSDPPLREGGDGVEGRLPEGV--LDKRGLARVFTLTHAAGRAAWGHPVELA--------------------------------------QFKASRMAAALLAHIASMNASDAVLSGXXXXXXXXXXXXXXITFDQFAQWAAEEAPFLHHALGTYMQRRCF--PDDK-------------LPPSAPKFETPRLLQPSSVLSGLGPELLGLAIGRVMAQGPWVRLFTSDEDGLSFNRLCHSIMGYGGPSLLVLRDRVSGAVLGGVASDTWRELNTFYGGSESFLFQLSPSFRVCQSKPASERNYMYLNLKTKVLYHNIIEHCTAEXXXXXXXXXGFSLPHGLGMGGTRDNFRFFIPESFDAEASVAKSNCMTFEPGELCPSANRRFEIDSLEVWGLGGEEAVSAGLDARMRHRAAVAHTLNKARKVDKAKFLDNEFDREFLLGKTFNGGXXXXXKGENR 518
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A7S3YII2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YII2_HETAK) HSP 1 Score: 232 bits (591), Expect = 2.430e-65 Identity = 127/252 (50.40%), Postives = 163/252 (64.68%), Query Frame = 1 Query: 1108 AVFTPPRP--QEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEAS--------FLLRLSPDFKVIPSKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRN-FEVDIMEVWGVGG-----EEALGEALEAREKQRQYTAAQ-IHQARQVDKSKFATNAFDKEFLLGKTF 1812 A F PPRP P +L + LA + +QGPW ++Y+S EDG SFNRV K +GYGGPT++L+R+ GAV+GG A +PW+E N YGG FL RL P+F++ P+++ N NF YLNLKGFSLPHG GMGGS FRFF+PE L+D C + CLTFE+GEL + + F++ +EVWG GG E ALG+ LE RE TAA+ I +AR+VDK+ F NAFD+EFLLGKTF Sbjct: 1 AAFAPPRPLGSSPGGILQGRARTLALLAAHSAKVQGPWAKLYDSREDGTSFNRVCHKALGYGGPTLVLVRDE-GGAVFGGLAPAPWREGNEMYGGXXXXXXXXXXXFLFRLEPEFRIYPARVGGNENFMYLNLKGFSLPHGMGMGGSIGNFRFFLPEMLED-CSTSARCLTFENGELSSSGKQGKFQILDLEVWGCGGSRAEVERALGKQLEVRE-----TAARNIEKARKVDKAAFLDNAFDREFLLGKTF 245
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A7S2SM30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM30_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.120e-55 Identity = 135/331 (40.79%), Postives = 181/331 (54.68%), Query Frame = 1 Query: 883 LAESVKSHLSSAG------TGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQ---AEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVI-PSKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSR-------NFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFGGSG 1824 L ESV SH + G GA +GV+ W A + PLLH L T + RCF + + + L + P+ +PS +L A +FGLA + LQGPW R+Y S EDGLSF+R+ ++GY GP++++I E GA++GG A S W+ESNSF G FL R+ P F V P +F YLN +GF+LP G G GG + FR F+PE+ D V RS CLT+E+G L + S F + +EVWG GG +A+ A ++ K RQ AA I +AR+VDK+KF N FD+EFLLGKT G G Sbjct: 229 LVESVWSHAAKVGGLKQVHRGATHVQGVTFPAFADWSAIQCPLLHLSLVTLIQARCFSPWTGH-----------SGLTNGLQL---PKLDQPSAILTGKPDLCAGLFGLASAAVELQGPWARLYTSSEDGLSFSRLVHSVLGYTGPSILII-EDEEGAIFGGFAASGWRESNSFSGRPGCFLFRMRPTFSVYRPRLPRGEQHFMYLNQRGFALPRGLGFGGRLDNFRLFLPESFDGG-VCRSRCLTYEAGPLAQSNSPASMEGGLEFGIRSVEVWGCGGIDAVQAAKSSQAKTRQQKAASIEKARKVDKAKFWENTFDREFLLGKTAGAGG 543
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A662WM33_9STRA (TLDc domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WM33_9STRA) HSP 1 Score: 205 bits (521), Expect = 8.570e-54 Identity = 129/313 (41.21%), Postives = 177/313 (56.55%), Query Frame = 1 Query: 913 SAGTGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFGGSGGHYNANED 1848 SAGT + + SS W+ + PLL+ ++M + F A PS + SS A F P + + ++ L+ T A+Q R+Y S +DGLSFNR++F L+GY GPT+ +IR+ GA++G DS WKES+ FYGG FL RL+P+ + + +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ CL+FESG L + S F VD MEVWG GG E GE +++ RQ TA I++AR+VDK++FA + FDKEF L KTFG G +D Sbjct: 152 SAGTSSSSQ--TSSDDFVRWIGAQFPLLYTIFMSWMARKSF--------ASLARPSYQNAAASSDASFLP---------VHHCRSHFVALSTVTSAVQTSLSRLYTSSQDGLSFNRLSFHLLGYSGPTLTVIRDT-GGAIFGMFCDSEWKESSRFYGGNGCFLFRLAPETSIYRVTASGANENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDENSYSTPKCLSFESGRL--SSSEQFVVDAMEVWGCGGAE--GEL--SQKAHRQETADLINRARKVDKAQFAGSDFDKEFFLSKTFGHGGDRARVADD 438
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: D0N3A1_PHYIT (TLDc domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N3A1_PHYIT) HSP 1 Score: 203 bits (517), Expect = 3.980e-53 Identity = 125/315 (39.68%), Postives = 181/315 (57.46%), Query Frame = 1 Query: 877 DRLAESVKSHLSSAGTGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREK-QRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFG 1815 DR+A++ K+ +A + G SS W+ + PLL+ ++M + F E+L PS + P+ S +L ++ L+ T +LQ P R+Y S +DGLSFNR+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL RL+P+ + S +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ + CL+FE G L + F +D MEVWG GGEE+ + R+K RQ TA I++AR+VDK++F N FDKE LGKTFG Sbjct: 155 DRMADAAKALARAALPPSAGSTQASSDDFVRWIGSQFPLLYTIFMSWMARKSF----------ESLTK-----PS----YEAPQLSHTSGILS--RSHFVALSTVTTSLQTPLSRLYTSAQDGLSFNRLSYHILGYSGPTLTIIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDENSYTTAKCLSFEPGRL--SSGEQFVIDAMEVWGCGGEES-----DLRQKAHRQETADLINRARKVDKAQFVGNDFDKEMFLGKTFG 440
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A3R7J8C9_9STRA (TLDc domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8C9_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.620e-52 Identity = 121/314 (38.54%), Postives = 176/314 (56.05%), Query Frame = 1 Query: 877 DRLAESVKSHLSSAGTGAIGEEGVSSQGLKAWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIPSKMAS-NNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFG 1815 DR+ + + +A A G SS W+ + PLL+ ++M +CF G PS A PR S +L ++ LA ++Q R+Y S +DGLSFNR+++ ++GY GPT+++IR+ + GAV+G D+ WKES+ +YGG FL R++P+ + +S N N+ YLN KGF+LP G G+GGST+ FR F+ E LD+ S CL+FE G L N+ F +D +E WG GGEE+ +++ RQ TA I++AR+VDK++F N FDKEFLL KTFG Sbjct: 130 DRMMDVANALAHAAMPPAAGATQASSDDFVRWIGAQFPLLYTIFMSWMARKCF--------GSMTKPSYQA-----------PRLSNNSSILS--RSHFVALATVNSSIQTSLRRLYTSTQDGLSFNRLSYHILGYSGPTLVVIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRMAPEISIYRVTASSANENYMYLNSKGFALPRGLGIGGSTDKFRLFLSEDLDENSYSTSKCLSFEPGRLSSNEK--FVIDTIEGWGCGGEESDL----SQKAHRQETADLINRARKVDKAQFLGNDFDKEFLLSKTFG 415
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A067BP30_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BP30_SAPPC) HSP 1 Score: 193 bits (491), Expect = 7.100e-51 Identity = 112/283 (39.58%), Postives = 156/283 (55.12%), Query Frame = 1 Query: 967 AWVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIPSKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFG 1815 +W + PLLH S +M +CF AS+PS+ + + PR PS +L + E+ L+ + LQ W R+Y S +DGLSFNR+ + L+GY GPT+I+ GA +G D+PWK+ + F+GG FL RL P+ V PS A NF Y N KG +LP G G+GG+T R F E LDD C C TF G L S F++ +E+WG GG + +A++ R TA I++AR+VDK++F +N FD+E LGKTFG Sbjct: 78 SWTSASWPLLHTVFSAWMAHKCF-----------------ASLPSTRSTYMAPRLSHPSDILS--RGELIALSGQSMQLQDTWDRLYTSTQDGLSFNRLCYHLLGYAGPTLIVCTAM-DGATFGAYCDTPWKDQSKFFGGPGCFLYRLCPNLLVCPS--AGGTNFMYFNTKGVALPRGLGLGGTTSKCRLFFDEDLDD-CYTALKCNTFAPGSLSLRSS--FQIQTLEIWGCGG----AASRQAQKGYRADTADLINKARKVDKAQFVSNGFDREMFLGKTFG 331
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Match: A0A0N7L627_PLAHL (Uncharacterized conserved protein, contains TLDc domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L627_PLAHL) HSP 1 Score: 196 bits (498), Expect = 1.330e-50 Identity = 117/283 (41.34%), Postives = 168/283 (59.36%), Query Frame = 1 Query: 970 WVAERAPLLHHCLSTFMHTRCFLYGDDRGLGVEALPSCAASIPSSLAVFTPPRPQEPSYLLDNHQAEIFGLALSTKALQGPWMRIYNSEEDGLSFNRVAFKLVGYGGPTVILIRERRSGAVWGGCADSPWKESNSFYGGEASFLLRLSPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFESGELCPNQSRNFEVDIMEVWGVGGEEALGEALEAREKQRQYTAAQIHQARQVDKSKFATNAFDKEFLLGKTFG 1815 W + PLL+ +T++ +CF E+L PS + PR S +L ++ L++ T +LQ R+Y S +DGLSFNR+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL RL+PD + S N N+ YLN KG++LP G GMGGST+ FR F+ E LD+ + CL+FE G L N+ +F +D+MEVWG GG+E+ +EK R TA I++AR+VDK++F N FDKE LGKTFG Sbjct: 187 WTELQLPLLYTVFTTWIAQKCF----------ESLTK-----PS----YEAPRLSPKSEILS--RSHFVALSMVTTSLQRTLNRLYTSTQDGLSFNRLSYHILGYSGPTLTVIRDVQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRLAPDINICRVSASGINENYMYLNSKGYALPRGLGMGGSTDKFRLFLSEDLDEQSYTIAKCLSFEPGRLSFNE--HFVIDVMEVWGCGGDESEHN----QEKHRLETAELINRARKVDKAQFIDNDFDKETFLGKTFG 441 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1116.1044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1116.1044.1 >prot_H-canaliculatus_F_contig1116.1044.1 ID=prot_H-canaliculatus_F_contig1116.1044.1|Name=mRNA_H-canaliculatus_F_contig1116.1044.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=575bp MPRRRPFQRPSTSNTREDIVAPPSTPPDNGASNVQHGQQQYLLFPSALACback to top mRNA from alignment at H-canaliculatus_F_contig1116:2329..9185- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1116.1044.1 ID=mRNA_H-canaliculatus_F_contig1116.1044.1|Name=mRNA_H-canaliculatus_F_contig1116.1044.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6857bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1116:2329..9185- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1116:2329..9185- >mRNA_H-canaliculatus_F_contig1116.1044.1 ID=mRNA_H-canaliculatus_F_contig1116.1044.1|Name=mRNA_H-canaliculatus_F_contig1116.1044.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3450bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1116:2329..9185- (Hapterophycus canaliculatus Oshoro5f female)back to top |