prot_H-canaliculatus_F_contig10050.85.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10050.85.1
Unique Nameprot_H-canaliculatus_F_contig10050.85.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length354
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10050.85.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 8.540e-122
Identity = 198/309 (64.08%), Postives = 226/309 (73.14%), Query Frame = 0 
Query:   54 RGNSAG---NKALVKQVVETWVEESLDLRRFQGRRIHICEGETLPEVLSEFWSLASELAQEKYSAMANDRDSYAAHALFVVTRCDLLKDYKIMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSRTRTAD-----DANSKGLARFINFSRSPYPMFGLTASAGSAVRSDPIEASDKTARLRSDLELVYNSVAGPSTDDCVDSHGSPHGTIPSSAEEVEDKTLDWLFGLPSSSSSSSSPAPGKKQATVFAEGKQGGAAQVGVSVGGGERGGHGAGCQANTVPGSSYLTSSYEGGLMTSNLNTPEKV 354
            RG + G      L+KQ VE W +ESLDLRRFQG+R+HIC+ ETLPEVLSEFWSLAS +AQEKYSAMA DRD YAAHALFV  RC LLKDY +MRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPS+TR++      D N+KGL+RF+NFSR+PYP FGLTA+AGS VRS+PIE +DK   LR DLELVYNSVAG STDDCVDSHGSPHGTIPSS EEV+DK LDWL+ LP +  +    A G  +    A  +    A + V+                       LTSSYEGGL+TS LN+PEKV
Sbjct:  114 RGATGGFGRQNTLIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRD-YAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWLYSLPPALQAGQEGAEGSVEERGAAGDEAVSTAAI-VNXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV 420
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10050.85.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 3.860e-105
Identity = 192/349 (55.01%), Postives = 221/349 (63.32%), Query Frame = 0 
Query:   53 PRGNSAGN----KALVKQVVETWVEESLDLRRFQGRRIHICEGETLPEVLSEFWSLASELAQEKYSAMANDRDSYAAHALFVVTRCDLLKDYKIMRHLD--------------------------------KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSRTRTAD-----DANSKGLARFINFSRSPYPMFGLTASAGSAVRSDPIEASDKTARLRSDLELVYNSVAGPSTDDCVDSHGSPHGTIPSSAEEVEDKTLDWLFGLPSSSSSSSSPAPGKKQATVFAEGKQGGAAQVGVSVGGGERGGHGAGCQANTVPGSSY------LTSSYEGGLMTSNLNTPEKV 354
            PR  + G       L+KQ VE W EESLDLRRFQG+R+HIC+ ETLPEVLSEFWSLA+ +AQEKYSAMA D D YAAHALFV  RC LLK+Y +MRHLD                                KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPS+TR++      D N+KGL+RF+NFSR+PYP FGLTA+AGS VRS+PIE +DK   LR DLELVYNSVAG STDDCVDS G   G IPSS EEV+DKTLDWL+ LP +  +    A G  +       ++G A    VS                             LTSSYEGGL+TS LN+PEK+
Sbjct:  100 PRRGATGGFGRQNTLIKQAVEAWAEESLDLRRFQGKRVHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHD-YAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIEKTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEGAVGGVE-------ERGAAGDEAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKL 440
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10050.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0L3_ECTSI8.540e-12264.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGJ1_9PHAE3.860e-10555.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10050contigH-canaliculatus_F_contig10050:168..3484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10050.85.1mRNA_H-canaliculatus_F_contig10050.85.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10050 168..3484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10050.85.1 ID=prot_H-canaliculatus_F_contig10050.85.1|Name=mRNA_H-canaliculatus_F_contig10050.85.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=354bp
RNSCTSSGSSSSSSSRLYAKPADPPSSSAAPGKDKGKEGEEQKSSAKKRS
RKPRGNSAGNKALVKQVVETWVEESLDLRRFQGRRIHICEGETLPEVLSE
FWSLASELAQEKYSAMANDRDSYAAHALFVVTRCDLLKDYKIMRHLDKVL
DFCSGGCSDFGRTVTLQHYHPDFVLPPSRTRTADDANSKGLARFINFSRS
PYPMFGLTASAGSAVRSDPIEASDKTARLRSDLELVYNSVAGPSTDDCVD
SHGSPHGTIPSSAEEVEDKTLDWLFGLPSSSSSSSSPAPGKKQATVFAEG
KQGGAAQVGVSVGGGERGGHGAGCQANTVPGSSYLTSSYEGGLMTSNLNT
PEKV
back to top