prot_H-canaliculatus_F_contig1080.759.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1080.759.1
Unique Nameprot_H-canaliculatus_F_contig1080.759.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length641
Homology
BLAST of mRNA_H-canaliculatus_F_contig1080.759.1 vs. uniprot
Match: D8LF09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF09_ECTSI)

HSP 1 Score: 675 bits (1742), Expect = 3.660e-237
Identity = 400/585 (68.38%), Postives = 445/585 (76.07%), Query Frame = 0
Query:   60 VAINASRIDVTNLA--ERKDPASAYQITRPRWYNKAEVAIIVLLCQRLRMLDLKGVEHMLDAASAFAKEDPRDVWQRALFLSKAAPGANFRTVIQRHPRTLLVPVHKMKRVFAILXXXXXXXXXXXXXXXXXSVLSRNATRLESNIAGLKRHAPEVDSAIFQAAPSMVYLPPHTVEEKVAALRACLPGVDLYTFLKGMPTVLGRSKETVPRGMSQLRERFPTASSKELVRIVESAPSLVRMSGANGTLSIKASASAKTADPASVDHLMALLPGVNVTNVISNAPGVLIRGVASLXXXXXXXXXXXXXXXXXXXXXXXXXXMYLDIDRTVRPKAMWIQEAVGLDQQGLDRLVEQGPWLLKAGWGPLARLEFAVQAGIATVDRPSSMFSLVRRSRLAFAAAHHPAYSEFLRNRLEEEEIEGGSGXXXGDWEGGQQGEGGGGALHPLAWRAAASKDEEAGR-VSRRGSAKMRSEPPLANPAGGGRRRTAKLENAGATKGVV-SGAEGEEDDDNASVLERTALEVAELEDALGRGRKSRLAGVKDRPPNAQQSPLARVQGSAQEGDALLDLGREKIVAYETPPQRQLGA 640
            +A+NAS    T+LA     + AS YQITRPRWYNKAEVAIIVLLCQRLRM+DLKGVEHMLDAA  FAKEDPRDVWQRAL+LSKAAPGANFRTVIQRHPRTLLVPVHKM+ V ++LXXXXXXXXXXXXXXXXX     N TRLE NIAGLK++APEV+SAIFQAAPSMVYLP HTVEEKVAALRACLPG+DLY FLKGMPT L RSK+TVPRGM QLRERFP+AS++ELVRIVESAPSLVRMSGANG+LSIK            V  L  L P  NVT ++S  PG+                                  MYLD+DRTVR KAMWIQ+AVGLDQ+GLDRLVEQGPWLLKAGWGPLARLEFA++AG+ATVDRPS++FSLVRRSRLAFA AHH +Y  FLR +LEEE IE       G  EG      GG   HPLAWRAAA    + GR VSR  S K  S P  A+   GG+ RTA+LENAGAT GVV    +G+E+D +A ++ERTALEVA LEDALGRGRKSRL GVKDRPPN  QSPLAR+QGS  EGDALLDLG+EKIVAY++PPQ QLGA
Sbjct:    1 MALNASSDAATSLAVAPTSNSASGYQITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPRDVWQRALYLSKAAPGANFRTVIQRHPRTLLVPVHKMQHVLSLLXXXXXXXXXXXXXXXXXXXXXXNTTRLEDNIAGLKKYAPEVNSAIFQAAPSMVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIK------------VTKLQELFPSANVTKMVSRTPGI----------------------------------MYLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVATVDRPSTIFSLVRRSRLAFARAHHESYGSFLRKKLEEEAIE------LGGREGXXXXXEGGDLHHPLAWRAAAGNAVDGGRRVSRPVSPKKGSGPKAASATLGGK-RTARLENAGATPGVVLESGDGKEEDQDA-LMERTALEVAGLEDALGRGRKSRLGGVKDRPPNPGQSPLARLQGSRHEGDALLDLGKEKIVAYDSPPQPQLGA 531          
BLAST of mRNA_H-canaliculatus_F_contig1080.759.1 vs. uniprot
Match: A0A6H5K0X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X3_9PHAE)

HSP 1 Score: 478 bits (1229), Expect = 7.330e-161
Identity = 287/454 (63.22%), Postives = 320/454 (70.48%), Query Frame = 0
Query:  224 MVYLPPHTVEEKVAALRACLPGVDLYTFLKGMPTVLGRSKETVPRGMSQLRERFPTASSKELVRIVESAPSLVRMSGANGTLSIKASASAKT-ADPASVDHLMALLPGVNVTNVISNAPGVLIRGVASLXXXXXXXXXXXXXXXXXXXXXXXXXXM----------------------------------YLDIDRTVRPKAMWIQEAVGLDQQGLDRLVEQGPWLLKAGWGPLARLEFAVQAGIATVDRPSSMFSLVRRSRLAFAAAHHPAYSEFLRNRLEEEEIEGGSGXXXGDWEGGQQGEGGGGALHPLAWRAAASKDEEAGR-VSRRGSAKMRSEPPLANPAGGGRRRTAKLENAGATKGVV-SGAEGEEDDDNASVLERTALEVAELEDALGRGRKSRLAGVKDRPPNAQQSPLARVQGSAQEGDALLDLGREKIVAYETPPQRQLGA 640
            MVYLP HTVEEKVAALRACLPG+DLY FLKGMPT L RSK+TVPRGM QLRERFP+AS++ELVRIVESAPSLVRMSGANG+LSIKASA         +VD+LM+LLPGVNVTNVISNAPGVLIRGV SL                          M                                  YLD+DRTVR KAMWIQ+AVGLDQ+GLDRLVEQGPWLLKAGWGPLARLEFA++AG+ATVDRPS++FSLVRRSRLAFA A+H +Y  FLR ++EEE IE G  XXX                HPLAWRAAA  D E GR VSR  S K  S P  A+    G+ RTAKLE+AGAT GVV    +G+ED D  +++ERTALEVA LEDALGRGRKSRL GVKDRPPN  Q+PLAR+QGS  EGDALLDLGREKIVAY++PPQ QLGA
Sbjct:    1 MVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIKASAERHFFVSVPTVDNLMSLLPGVNVTNVISNAPGVLIRGVTSLPTKDGAILSEQPPASFLCDHAFKTMTMVSQPRSHAGQVTKLQELFPSANVTKMVSRTPGIMYLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVATVDRPSTIFSLVRRSRLAFARAYHESYGSFLRKKIEEEAIEQGXXXXXXXXXD---------LRHPLAWRAAAGNDVEGGRRVSRPVSPKKGSGPTAASATLDGK-RTAKLEHAGATAGVVLESGDGKEDKD--ALMERTALEVAGLEDALGRGRKSRLGGVKDRPPNPGQTPLARLQGSQHEGDALLDLGREKIVAYDSPPQPQLGA 442          
BLAST of mRNA_H-canaliculatus_F_contig1080.759.1 vs. uniprot
Match: A0A6H5K0J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.250e-39
Identity = 84/125 (67.20%), Postives = 93/125 (74.40%), Query Frame = 0
Query:   60 VAINASRIDVTNLA--ERKDPASAYQITRPRWYNKAEVAIIVLLCQRLRMLDLKGVEHMLDAASAFAKEDP-----------RDVWQRALFLSKAAPGANFRTVIQRHPRTLLVPVHKMKRVFAI 171
            +A+NAS    T+LA     + ASAYQITRPRWYNKAEVAIIVLLCQRLRM+DLKGVEHMLDAA  FAKEDP           RDVWQRAL+LSKAAPGANFRTVIQRHPR        ++RVF +
Sbjct:    1 MALNASSDAATSLAVAPASNSASAYQITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPVREPVRSLKLQRDVWQRALYLSKAAPGANFRTVIQRHPR--------VRRVFRV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1080.759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LF09_ECTSI3.660e-23768.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0X3_9PHAE7.330e-16163.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0J9_9PHAE1.250e-3967.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..640
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.851
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1080contigH-canaliculatus_F_contig1080:23450..28861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1080.759.1mRNA_H-canaliculatus_F_contig1080.759.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1080 23402..29170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1080.759.1 ID=prot_H-canaliculatus_F_contig1080.759.1|Name=mRNA_H-canaliculatus_F_contig1080.759.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=641bp
MTVLSFLLASLLLPISVPAFFVAVPLRVATLNDGRFNPCPSGLCSVEQST
AYPGDDAPLVAINASRIDVTNLAERKDPASAYQITRPRWYNKAEVAIIVL
LCQRLRMLDLKGVEHMLDAASAFAKEDPRDVWQRALFLSKAAPGANFRTV
IQRHPRTLLVPVHKMKRVFAILSEAYPNANMSRVLERIPSVLSRNATRLE
SNIAGLKRHAPEVDSAIFQAAPSMVYLPPHTVEEKVAALRACLPGVDLYT
FLKGMPTVLGRSKETVPRGMSQLRERFPTASSKELVRIVESAPSLVRMSG
ANGTLSIKASASAKTADPASVDHLMALLPGVNVTNVISNAPGVLIRGVAS
LPAKVTKLQELFPSANVTKMVSRTPGIMYLDIDRTVRPKAMWIQEAVGLD
QQGLDRLVEQGPWLLKAGWGPLARLEFAVQAGIATVDRPSSMFSLVRRSR
LAFAAAHHPAYSEFLRNRLEEEEIEGGSGGGDGDWEGGQQGEGGGGALHP
LAWRAAASKDEEAGRVSRRGSAKMRSEPPLANPAGGGRRRTAKLENAGAT
KGVVSGAEGEEDDDNASVLERTALEVAELEDALGRGRKSRLAGVKDRPPN
AQQSPLARVQGSAQEGDALLDLGREKIVAYETPPQRQLGA*
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