mRNA_H-canaliculatus_F_contig10677.648.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: D8LU36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU36_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.660e-60 Identity = 89/117 (76.07%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 4 GADEHLDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTLLPEEAE 354 G EHLDWM DGRELW+GV+ L+PTILTGLPMGNWAEPQK R WCKRELGEHVPVITCMSRDKH +CR GN+LIDDR SL AW+RAGGVFIHHT+A+SSL KLK +LP E E Sbjct: 80 GFYEHLDWMPDGRELWDGVAHLQPTILTGLPMGNWAEPQK-----RNWCKRELGEHVPVITCMSRDKHTHCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAILPAEEE 191
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A835Z4N0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N0_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.160e-40 Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 19 LDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGE--HVPVITCMSRDKHIYCRA-GNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTLLP 342 L WM+DG++LW + G +P ILTGLP+G WA PQK R+WC+RELG+ VPVITCMSRDKH YCR G++LIDDR + E WE AGGVF+ HTSA S+A L+ LLP Sbjct: 30 LPWMKDGKQLWEFIRGYKPAILTGLPLGQWAAPQK-----RRWCQRELGKPSDVPVITCMSRDKHTYCRVPGSILIDDRITAKEPWEAAGGVFVFHTSAQQSIADLQKLLP 135
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: H9UJ11_SPIAZ (Uncharacterized protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) TaxID=889378 RepID=H9UJ11_SPIAZ) HSP 1 Score: 139 bits (349), Expect = 1.060e-39 Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 1 PGADEHLDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGN------VLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTLLPE 345 PG L W DG +LW L PTILTGLP G+WAEPQK R+WC RELG VPVITCMSRDKH+ +L+DDR LAEAWE AGGVFIHHTSA++S+ +L L P+ Sbjct: 45 PGFYASLHWTPDGADLWEFARRLSPTILTGLPRGSWAEPQK-----REWCARELGSTVPVITCMSRDKHLQAEQARQVGMTAILVDDRQRLAEAWEAAGGVFIHHTSAAASIEQLSGLYPD 160
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A7S4LFG0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LFG0_9EUGL) HSP 1 Score: 133 bits (334), Expect = 5.880e-36 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 19 LDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 LDWMEDG++LWN + L+P IL+G+P+G WA QK R+W RELG HV V+TC++ DKH++CR G VLIDD L WE AGGVF+HH S ++L +LK L Sbjct: 184 LDWMEDGKQLWNAIKPLQPKILSGVPLGEWAAEQK-----RRWVARELGWHVKVLTCLAADKHLHCREGAVLIDDSVKLRGDWEAAGGVFVHHQSTKATLKQLKQL 284
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A7S4GJQ1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJQ1_9EUGL) HSP 1 Score: 130 bits (326), Expect = 1.750e-35 Identity = 59/111 (53.15%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 4 GADEHLDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 G + L+W EDG+ LW + L P ILTGLP G WA PQK RKWC RELG VITC + K YCR G++LIDD L +AWE+AGG+FIHHT+ + +L KL+ L Sbjct: 79 GFFDQLEWTEDGQRLWTAIRHLHPVILTGLPQGTWAAPQK-----RKWCARELGCATKVITCKALQKCKYCRTGSLLIDDNLDLQQAWEKAGGIFIHHTTTARTLRKLQAL 184
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A4R4D4C3_9PROT (Uncharacterized protein n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A4R4D4C3_9PROT) HSP 1 Score: 127 bits (320), Expect = 2.730e-35 Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 19 LDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 L++M D LW + LRPTILTGLP+G+WA QK + W R LG HVP+ITCMSRDK + G+VL+DDRAS AE WER GG+FIHH+SA S+A+L+ L Sbjct: 57 LEFMHDAEVLWAFCAPLRPTILTGLPLGSWAPAQK-----KAWVARMLGAHVPIITCMSRDKPRWSGPGHVLVDDRASAAEGWERKGGIFIHHSSAERSIARLRAL 157
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A7S3XQ39_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ39_HETAK) HSP 1 Score: 130 bits (327), Expect = 4.390e-35 Identity = 63/106 (59.43%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 19 LDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 L WM DG+ELW+ + RPTILTGLPMG WAE QK R WC RELG VPV TC+SRDK R G VL+DDR SL E W AGGVFIHH S S ++ +L L Sbjct: 144 LSWMPDGKELWDRIQSQRPTILTGLPMGRWAEAQK-----RAWCARELGAGVPVDTCLSRDKWRRARPGAVLVDDRFSLQEKWVEAGGVFIHHQSTSQTIDQLTDL 244
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A2U1V4Q9_9PROT (Uncharacterized protein n=1 Tax=Roseomonas aestuarii TaxID=568898 RepID=A0A2U1V4Q9_9PROT) HSP 1 Score: 126 bits (317), Expect = 6.350e-35 Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 13 EHLDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 E L++M D +ELW + PTILTGLP+G WA QK R+W R LG HVPVITCMSR+K + G+VL+DDRAS AE WE+ GGVF+HH SA+ S+A L+ L Sbjct: 47 ETLEFMHDAQELWRFCAPCHPTILTGLPLGAWAPEQK-----RRWVARMLGAHVPVITCMSREKPRWSGPGHVLVDDRASAAEGWEKKGGVFVHHRSAAGSIAALRAL 149
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: V5WIQ5_9SPIO (Uncharacterized protein n=2 Tax=Salinispira pacifica TaxID=1307761 RepID=V5WIQ5_9SPIO) HSP 1 Score: 125 bits (315), Expect = 1.240e-34 Identity = 65/108 (60.19%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 19 LDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCR--AGN---VLIDDRASLAEAWERAGGVFIHHTSASSSLAKL 327 L WM DGR+LW+ + + P ILTGLPMGNWAE QK R WC RELGE V VITCMSR+K R AG VLIDDR L EAWE GG+FIHHT A SL +L Sbjct: 47 LHWMPDGRQLWDELKHMNPVILTGLPMGNWAEAQK-----RSWCARELGEDVEVITCMSREKAKKARERAGTRIPVLIDDRLRLKEAWEEMGGIFIHHTDAVKSLRQL 149
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Match: A0A5B2TB82_9PROT (Uncharacterized protein n=1 Tax=Roseomonas oryzae TaxID=1608942 RepID=A0A5B2TB82_9PROT) HSP 1 Score: 125 bits (315), Expect = 1.610e-34 Identity = 63/108 (58.33%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 13 EHLDWMEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPVITCMSRDKHIYCRAGNVLIDDRASLAEAWERAGGVFIHHTSASSSLAKLKTL 336 E L +M D LW + PTILTGLPMG+WA QK ++W R LG HVPVITCMSRDK + G+VL+DDRAS AE WER GGVFIHH SA+SS+A L L Sbjct: 46 ETLAFMHDAEVLWRFCAPHHPTILTGLPMGSWAPAQK-----KRWVARMLGAHVPVITCMSRDKPRWSGPGHVLVDDRASAAEGWERKGGVFIHHVSAASSIAALHRL 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10677.648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10677.648.1 >prot_H-canaliculatus_F_contig10677.648.1 ID=prot_H-canaliculatus_F_contig10677.648.1|Name=mRNA_H-canaliculatus_F_contig10677.648.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=109bp MEDGRELWNGVSGLRPTILTGLPMGNWAEPQKAGRPHRKWCKRELGEHVPback to top mRNA from alignment at H-canaliculatus_F_contig10677:1410..2456+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10677.648.1 ID=mRNA_H-canaliculatus_F_contig10677.648.1|Name=mRNA_H-canaliculatus_F_contig10677.648.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1047bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10677:1410..2456+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10677:1410..2456+ >mRNA_H-canaliculatus_F_contig10677.648.1 ID=mRNA_H-canaliculatus_F_contig10677.648.1|Name=mRNA_H-canaliculatus_F_contig10677.648.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10677:1410..2456+ (Hapterophycus canaliculatus Oshoro5f female)back to top |