mRNA_H-canaliculatus_F_contig10638.621.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10638.621.1
Unique NamemRNA_H-canaliculatus_F_contig10638.621.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: D7FXV4_ECTSI (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, family GT13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV4_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 7.530e-101
Identity = 168/265 (63.40%), Postives = 194/265 (73.21%), Query Frame = 1
Query:    1 EISSEDGINREAIHGAWKGGVGWGVGANVGDGSWKDGVSLSGNGGDGGTA----AVAAAEELR---GAVRWEPGQLTKLVELQEQQRVEEDEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTRGESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHVK 774
            +ISSED I    I G W GG+G G+ A VGDGSW   +S    GG+   +     +  A+E     G  RWEPGQL++L + Q          E GGV+R PMLG DA +L+ICANRPEYLERTL AVAEYHPGSSRGA++AIPVV+SQDG+S  V +VIS+FKTSMAGR++V HI H P   ESRPY+KLSAHY+WALSQ FDEL + GY+ A  DK IILEEDLEIAPDFFEYFSA APLLD DETLMAVSAWNDNGQA HVK
Sbjct:   79 DISSEDSIRNNYIRGGWMGGLGLGIDAYVGDGSWGAELSTDPAGGEDDVSRRRPVIINADEDGTGDGQARWEPGQLSRLAQRQXXXXXXXXXXE-GGVARTPMLGPDAVVLIICANRPEYLERTLNAVAEYHPGSSRGASFAIPVVISQDGSSSAVEEVISRFKTSMAGRAHVTHIHHTPAPRESRPYFKLSAHYEWALSQVFDELFQTGYSSAAVDKAIILEEDLEIAPDFFEYFSAMAPLLDSDETLMAVSAWNDNGQAAHVK 342          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A6H5L776_9PHAE (GT13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L776_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 1.800e-92
Identity = 158/244 (64.75%), Postives = 182/244 (74.59%), Query Frame = 1
Query:   55 GGVGWGVGANVGDGSWKDGVSLSGNGGDGGTA---AVAAAEELRGA---VRWEPGQLTKLVELQEQQRVEEDEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTRGESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARH 768
            GG+G G+ A VGDGSW   +S    GG+        +  A+E  G    VRWEPGQL++L + Q          E  G++R PMLG DA LLVICANRPEYLERTL+AVAEYHPGSSRGA++AIPVV+SQDG S  V +VIS+FKTSMAGR++V HI H P   E+RPY+KLSAHY+WALSQ FDEL + GY+ A  DKVIILEEDLEIAPDFFEYFSA APLLD DETLMAVSAWNDNGQA H
Sbjct:    2 GGLGLGIEAYVGDGSWDAELSADRAGGEDDVRRRPVIINADEEGGGDGQVRWEPGQLSRLAQRQXXXXXXXXXXE-RGMARTPMLGPDAVLLVICANRPEYLERTLKAVAEYHPGSSRGASFAIPVVISQDGPSSAVEEVISRFKTSMAGRAHVTHIHHTPVGRENRPYFKLSAHYEWALSQVFDELFQTGYSSAAVDKVIILEEDLEIAPDFFEYFSAMAPLLDSDETLMAVSAWNDNGQAAH 244          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: Q8L5D3_PHYPA (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=Q8L5D3_PHYPA)

HSP 1 Score: 142 bits (357), Expect = 9.520e-36
Identity = 75/179 (41.90%), Postives = 116/179 (64.80%), Query Frame = 1
Query:  247 EDEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            +++E+   +S +  LG  AA++++  NRP+YLERTL++V +YH    +  A   P+ VSQDG++Q V D    F +     +++ H+   P +    GE   YYK+++HYKWAL+Q F++ +          +V+IL +D+EI+PDFF YF ATAPLLD D+TL+A+S+WNDNGQ + V
Sbjct:  116 QNKEQLAKISGSSKLGPVAAVVIMACNRPDYLERTLKSVTKYH----KDVAEKFPLFVSQDGSNQDVMDTARSFSSV----NFLQHLDENPPKTRNPGEIIAYYKIASHYKWALTQLFNKRDFR--------RVVILGDDMEISPDFFSYFEATAPLLDTDKTLLAISSWNDNGQEKFV 278          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: U5D4N5_AMBTC (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5D4N5_AMBTC)

HSP 1 Score: 134 bits (337), Expect = 2.760e-34
Identity = 74/162 (45.68%), Postives = 106/162 (65.43%), Query Frame = 1
Query:  301 AALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHVK 774
            AA++V+  NRP+YLERT++++ +YH    +  A   P+ VSQDGT + V      +       +Y+ HI+  P R    GE   YYK++ HYKWAL + FDE     YN++   +VIILE+D+EIAPDFF+YF A + LL++D T+MAVS+WNDNGQ + V+
Sbjct:  107 AAVVVMACNRPDYLERTIQSILKYH----KSVASKFPLFVSQDGTHETVKSKALSYDQV----TYMQHIESSPIRTERPGELIAYYKIANHYKWALHRLFDE-----YNFS---RVIILEDDMEIAPDFFDYFGAASLLLEKDNTIMAVSSWNDNGQKQFVQ 252          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A6I9S8U6_ELAGV (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9S8U6_ELAGV)

HSP 1 Score: 134 bits (338), Expect = 3.470e-33
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 1
Query:  154 VAAAEELRGAVRWEPGQLTKLVELQEQQRVEE--DEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            + A EE R     E  QL  L+   E++ ++    ++EW      P+    AA++++  NRP+YLERTL +V +Y     R  +   PV VSQDGT+    DV +K   S +  +Y+ H++ EP R    GE   YYK++ HYKWAL + F +     +N++   +VIILE+D+EIAPDFF+YF AT+ LL++D+T+MAVS+WNDNGQ   V
Sbjct:   65 IVALEEARKIRDEECAQLKTLIRHLERKNLQSLTSQKEW------PV----AAVVIMACNRPDYLERTLESVLKYQ----RSVSAKFPVFVSQDGTNP---DVKTK-ALSYSQITYMQHLESEPVRTERPGEIIAYYKIARHYKWALDELFTK-----HNFS---RVIILEDDMEIAPDFFDYFEATSALLEKDKTIMAVSSWNDNGQVEFV 250          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A7S3XJB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJB6_HETAK)

HSP 1 Score: 132 bits (331), Expect = 5.580e-33
Identity = 76/169 (44.97%), Postives = 97/169 (57.40%), Query Frame = 1
Query:  298 DAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVI--HIQHEPTRGESRP------YYKLSAHYKWALSQAFDELERAGYNWALKD---KVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            D  LLVIC +R +YLERTL AV  YHPG        +P+++SQDG   +V  V+  F+   A +   +  H  H P  G  R       Y KL+ H+ WA  + +++        AL     +VI+LEEDLE+APDFFE F A APLLD D TL+A SAWNDNGQ  HV
Sbjct:    1 DTTLLVICHDRADYLERTLGAVLRYHPGEDT-----VPIIISQDGNDAKVVGVVDAFRAQFAAKHPRVRFHHIHRPQEGNLRGGGRQDGYQKLAQHFGWAFRRLWEDP-------ALTPGAARVIVLEEDLEVAPDFFELFGALAPLLDTDPTLLAASAWNDNGQRGHV 157          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: UPI0018AECEDF (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AECEDF)

HSP 1 Score: 132 bits (333), Expect = 1.780e-32
Identity = 73/162 (45.06%), Postives = 107/162 (66.05%), Query Frame = 1
Query:  301 AALLVICANRPEYLERTLRAVAEYH-PGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            AA++++  NR +YLERT+ ++ +YH P +S+      P+ +SQDGT+Q V D    +       +Y+ H+  EP      GE   YYK++ HYKWAL   F++     +N+   ++VIILE+D+EIAPDFF+YF ATA +LD+DET+MAVS+WNDNGQ + V
Sbjct:  106 AAVVIMACNRRDYLERTVESILKYHSPVASK-----FPLFISQDGTNQAVKDKALSYNQI----TYMQHLDFEPVHPERPGEILAYYKIARHYKWALDALFNK-----HNF---NRVIILEDDMEIAPDFFDYFEATASILDKDETIMAVSSWNDNGQVQFV 250          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A445EWV4_ARAHY (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445EWV4_ARAHY)

HSP 1 Score: 128 bits (321), Expect = 5.350e-32
Identity = 90/211 (42.65%), Postives = 128/211 (60.66%), Query Frame = 1
Query:  154 VAAAEELRGAVRWEPGQLTKLVELQEQQRVEEDEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYH-PGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            + A EE R     E GQ+  LV+  E++    D +      + P+    AA++++  NR +YLERT+ +V +Y  P SSR      P+ VSQDG++   ADV SK   S    SY+ H+  +P +    GE   YYK++ HYKWAL Q F       +N++   +VIILE+D+EIAPDFF+YF ATA LLD+D+++MAVS+WNDNGQ + V
Sbjct:   65 IVALEEERNRRDQECGQMKSLVQDLERK----DVQRLINKVQVPV----AAVVIMACNRADYLERTINSVLKYQKPISSR-----YPLFVSQDGSN---ADVRSK-ALSYDQLSYMQHLDLKPVQTERPGELIAYYKIARHYKWALDQLFYH-----HNFS---RVIILEDDMEIAPDFFDYFEATAALLDKDKSIMAVSSWNDNGQKQFV 250          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A2I0AZ40_9ASPA (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AZ40_9ASPA)

HSP 1 Score: 129 bits (325), Expect = 9.180e-32
Identity = 82/197 (41.62%), Postives = 120/197 (60.91%), Query Frame = 1
Query:  193 EPGQLTKLVELQEQQRVEEDEEEWGGVSRAPMLGSDAALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHV 771
            E  QL  LV+  E++ V+       G +  P+    AA++V+  +RP+YLERT+ +V +YH       A   P+ VSQDGT+  V     K   S +  +Y+ H+  EP      GE   YYK++ HYKWAL + F +     +N+   ++VIILE+D+EIAPDFF+YF AT+ LLD+D+++MAVS+WNDNGQ + V
Sbjct:   19 ETAQLKTLVQDLEKKSVQR----LSGEAEGPV----AAVVVMACSRPDYLERTILSVLKYH----YAVASKFPLFVSQDGTNPDV----KKLALSYSQITYMQHLDFEPVHTERPGELIAYYKIARHYKWALDELFLK-----HNF---NRVIILEDDMEIAPDFFDYFEATSTLLDKDKSIMAVSSWNDNGQVQFV 191          
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Match: A0A2R6R743_ACTCC (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R743_ACTCC)

HSP 1 Score: 129 bits (323), Expect = 9.990e-32
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1
Query:  301 AALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVADVISKFKTSMAGRSYVIHIQHEPTR----GESRPYYKLSAHYKWALSQAFDELERAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWNDNGQARHVK 774
            AA+LV+  NR +YLERT++++ +Y   SS  + Y  P+ VSQDG    V      F       +Y+ H+ +EP      GE   YYK++ HYKWAL Q F +     +N+   ++VIILE+D+EIAPDFFEYF ATA LLD D+++MAVS+WNDNGQ + V+
Sbjct:   12 AAVLVMACNRADYLERTIKSILKYQ--SSLASKY--PLFVSQDGEDPHVRSKALSFNQL----TYMQHLDYEPVHTDRPGELIAYYKIARHYKWALDQLFYK-----HNF---NRVIILEDDMEIAPDFFEYFGATASLLDNDKSIMAVSSWNDNGQKQFVQ 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10638.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXV4_ECTSI7.530e-10163.40Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A6H5L776_9PHAE1.800e-9264.75GT13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q8L5D3_PHYPA9.520e-3641.90Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
U5D4N5_AMBTC2.760e-3445.68Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A6I9S8U6_ELAGV3.470e-3341.51Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A7S3XJB6_HETAK5.580e-3344.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI0018AECEDF1.780e-3245.06alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A445EWV4_ARAHY5.350e-3242.65Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A2I0AZ40_9ASPA9.180e-3241.62Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A2R6R743_ACTCC9.990e-3246.30Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10638contigH-canaliculatus_F_contig10638:810..4144 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.4
Seed ortholog evalue2e-82
Seed eggNOG ortholog2880.D7FXV4
Preferred nameMGAT1
KEGG koko:K00726
KEGG ReactionR05983
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
GOsGO:0000139,GO:0001701,GO:0002252,GO:0002376,GO:0003002,GO:0003674,GO:0003824,GO:0003827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005797,GO:0005975,GO:0006040,GO:0006047,GO:0006049,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006807,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007568,GO:0007610,GO:0007626,GO:0008150,GO:0008152,GO:0008194,GO:0008340,GO:0008344,GO:0008375,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009227,GO:0009790,GO:0009792,GO:0009987,GO:0010259,GO:0012505,GO:0016020,GO:0016021,GO:0016319,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019439,GO:0019538,GO:0030534,GO:0031090,GO:0031224,GO:0031984,GO:0031985,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034655,GO:0034656,GO:0035010,GO:0035282,GO:0035283,GO:0035284,GO:0036211,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046348,GO:0046483,GO:0046700,GO:0048471,GO:0048513,GO:0048731,GO:0048856,GO:0055086,GO:0060322,GO:0070085,GO:0071704,GO:0098588,GO:0098791,GO:0140096,GO:0140103,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
EggNOG OGsKOG1413@1,KOG1413@2759
EC2.4.1.101
COG Functional cat.S
CAZyGT13
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons6
Model size774
Cds size774
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10638.621.1prot_H-canaliculatus_F_contig10638.621.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10638 810..4144 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928720.7559214-CDS-H-canaliculatus_F_contig10638:809..9301622928720.7559214-CDS-H-canaliculatus_F_contig10638:809..930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 810..930 +
1696845538.6599462-CDS-H-canaliculatus_F_contig10638:809..9301696845538.6599462-CDS-H-canaliculatus_F_contig10638:809..930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 810..930 +
1622928720.7682805-CDS-H-canaliculatus_F_contig10638:1358..15661622928720.7682805-CDS-H-canaliculatus_F_contig10638:1358..1566Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 1359..1566 +
1696845538.6792693-CDS-H-canaliculatus_F_contig10638:1358..15661696845538.6792693-CDS-H-canaliculatus_F_contig10638:1358..1566Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 1359..1566 +
1622928720.7818556-CDS-H-canaliculatus_F_contig10638:2266..24081622928720.7818556-CDS-H-canaliculatus_F_contig10638:2266..2408Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2267..2408 +
1696845538.6901245-CDS-H-canaliculatus_F_contig10638:2266..24081696845538.6901245-CDS-H-canaliculatus_F_contig10638:2266..2408Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2267..2408 +
1622928720.7933588-CDS-H-canaliculatus_F_contig10638:2660..27711622928720.7933588-CDS-H-canaliculatus_F_contig10638:2660..2771Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2661..2771 +
1696845538.7019475-CDS-H-canaliculatus_F_contig10638:2660..27711696845538.7019475-CDS-H-canaliculatus_F_contig10638:2660..2771Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2661..2771 +
1622928720.812232-CDS-H-canaliculatus_F_contig10638:2997..30791622928720.812232-CDS-H-canaliculatus_F_contig10638:2997..3079Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2998..3079 +
1696845538.7136624-CDS-H-canaliculatus_F_contig10638:2997..30791696845538.7136624-CDS-H-canaliculatus_F_contig10638:2997..3079Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 2998..3079 +
1622928720.8252156-CDS-H-canaliculatus_F_contig10638:4034..41441622928720.8252156-CDS-H-canaliculatus_F_contig10638:4034..4144Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 4035..4144 +
1696845538.7233343-CDS-H-canaliculatus_F_contig10638:4034..41441696845538.7233343-CDS-H-canaliculatus_F_contig10638:4034..4144Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10638 4035..4144 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10638.621.1

>prot_H-canaliculatus_F_contig10638.621.1 ID=prot_H-canaliculatus_F_contig10638.621.1|Name=mRNA_H-canaliculatus_F_contig10638.621.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=258bp
EISSEDGINREAIHGAWKGGVGWGVGANVGDGSWKDGVSLSGNGGDGGTA
AVAAAEELRGAVRWEPGQLTKLVELQEQQRVEEDEEEWGGVSRAPMLGSD
AALLVICANRPEYLERTLRAVAEYHPGSSRGAAYAIPVVVSQDGTSQRVA
DVISKFKTSMAGRSYVIHIQHEPTRGESRPYYKLSAHYKWALSQAFDELE
RAGYNWALKDKVIILEEDLEIAPDFFEYFSATAPLLDQDETLMAVSAWND
NGQARHVK
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mRNA from alignment at H-canaliculatus_F_contig10638:810..4144+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10638.621.1 ID=mRNA_H-canaliculatus_F_contig10638.621.1|Name=mRNA_H-canaliculatus_F_contig10638.621.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3335bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10638:810..4144+ (Hapterophycus canaliculatus Oshoro5f female)
GAGATCTCGTCCGAGGATGGCATTAACCGGGAGGCCATACACGGAGCCTG GAAGGGTGGCGTTGGTTGGGGCGTCGGCGCGAACGTCGGGGATGGTTCGT GGAAGGATGGGGTGAGCCTGAGTTGCTGCCGCCGTAGTCGCCTTAGCCGC CGCCGCCGCCGCCGCCTCCGCTCCATTTCTTTTCATGCCGCTTTCTTTTC ACAGCGGTTCACCCGCTGCCATCCATCCATCCGTCCATCCTTGGCAGCCT CAACGAAGCACTTGTCCGATGGCGGTAGTCGTAGTGAAGTCTTCTCTGCT TTTCCCTGGAGCTGAAGCGCGCCACACAAAGAGATGGCACACTCACAAAC GCGCGATTCTCCCGCTCCCCTTTCGCGCCGCAGCTTCCCGTGGCTCCTGG GCCCGGCGCGGACGTGCCCGACGTGATTGCTGCTGCCGCCGCCGCCGCCG CCGCGGGTGCCGCCGCCGCCGCCGCCGCCTCCAAAGACCACCTCAACAAA AGGGCGGTGATCATAAATGTGGACAAGTTGAAAAGTGGCAACGAACGAGG CGGGAACGGCGGCGACGGCGGCACCGCCGCCGTCGCCGCCGCTGAAGAAC TTAGAGGGGCGGTCAGGTGGGAACCGGGGCAGCTGACCAAGCTCGTCGAG CTGCAGGAGCAGCAGCGAGTCGAGGAGGACGAGGAGGAGTGGGGGGGGGT GAGCAGGGCTCCGATGTTGGGGTCGGACGCTGCGCTTTTGGTCATCTGCG CCAACAGGTGGGGCGATTTAGGTCGGGGGATGTCGTGCTGGTGGTCATTG TTGCCGGGTGTTGGCCGCGGCCGTCGCCGCCGCTGCTGCTCCTGCTGCGG TTGTAGTGGTGTTGGTGGTGTCAGCAGAGGTGGCAGGGGCGGTGATGGTG GTGGCGGCGCAAGCAGCGGGGGCGGTTGTGTTGCTGTGGGTGGTGGTGGC GGCGTCGGTGTTCCTGAAAAAGTTGTCGTCATCGTCGATGTTAACCAGGC CGAAGTCGCGGCGGCGCTGTCCGCTCCAGGCCTTGGTGCCGGTGTTGACG TGCTTGGCGTTGACGGAGGCCTTGCGTTGTGCGGGTGTTCTCCTCTGTGG CATTGTTGCTCCTCATCGCTCCGTCGTTGTTCGCAACTCCTAGGATAGCG CAGGGATGTTGAGGTTCTTGAGGCTGGTGGCCCTGTCGAGACACGCCCAC AGACAGAGCGATCCCACCGTGCAGGCGTTTTCGTTTTCATCACTGGCGAC CCCCTCGTCCCCGGCCCTCCCCACGACCTATTGTCTCTCTGTCTCCCTCC CCGCTCCCCCCTCCCCTCTCCCAATCCCGAGGTGGCAAAAAAGACAGAAA AAAAGAGAAGAAAAAACGAAAAAACAACCGCAAGACGTTAATAAAATATT CCCGAATCCTGCCTCAGAGGTATCTTCCGTGTTGTCAACTCCTGCTTCTC ATTTAAGGCCGGAATACCTCGAGCGAACACTACGAGCGGTCGCCGAGTAC CACCCCGGGAGTTCCAGAGGCGCGGCGTACGCAATACCCGTGGTGGTTTC CCAGGACGGGACGTCACAGAGAGTGGCAGACGTCATCTCCAAATTTAAGG TAAGATGGAGGAGGAGGAGGAGGAGGCGGCTGGAGAATTCCAAACGGATA CATGTTTCCTTTTTTTTTCCGCGAGTGCCCTCTTGTGGAAGATCAGGTTC TCGACTTTCCGTTTCTCGTGCGAGCTGGTTTAGAAAAACCCTCGTGAACC GCGAGGTGTTTCGCTGCACCGTAACACTTTGGGCGTTGATGCTTTTGCTG CTGCTGCTGCTGTTGCTGCTGCTGCTTTCTGCGCTCGTCGCTCGTTCGCA GACCTCGATGGCGGGGCGTTCTTATGTGATTCACATCCAGCACGAGCCTA CGCGGGGAGAAAGCCGCCCGTACTACAAGCTTTCGGCGCACTACAAGTGG GCGCTTAGCCAGGTATCATCCATCCATCGCACTGCTGCTGCTGCTGCTAC TGCTGCTGCTGTTACTGTTATGAGTGTTGTTGTTGTTGTTGTCGTTGTTG TTGTTGTTGTTGTTATTATGTTGTTGTTGATTGTCCAGGCTGTTGGCGCT GCTTCTGACCCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTATCCCAT GAACGACGTTGCCGCTACTCGGCGGGCGAGTGTTGCAGGCGTTCGACGAG CTTGAGCGGGCAGGCTACAACTGGGCGTTGAAGGACAAGGTCATTATCCT GGAGGAGGACCTTGAGATTGGTAAGATGGGCTAAAATTGACCCCTCCGTA TGTCGTCTCCGAAAATAAATCTACGATCGATCGGCCCTCAGTCGTCAATC GCAGCGCGAGCTGATGCCAAGGTTAAGCCTAGCTCTGTCGCGCCTAATTG CGGACGCGAGGTTGGTGCACGGCGTCCTCCTTCGCGAAGAAGACGAGTAG GACGACAACAAGAGCATTAGCACGCACATGCCTCTCCCGCGATCGTGGTG AAGGAAATCAACCGATGCTGTGAACCGGAAGATCCGTTGGCTTGTTCTGG GAGGAAGACCCTCAGTTGCTTCAAAACGCGTTGCGGGCAAGCAGATTCGC GCCCCCACCTAAACGCTCCTGTCACCTCGTAGCTGTGGCAGTGCTGCACA TTTTCGCCAGCGATAAAGCCGAGAACGCCCTTTTGAGCTGCCCCACCCCC ACGCGCCTAGCGCCACGATACGGCGAGCAGCGCCGGGAGGAGGGACGTGT TCTGTCCCGATCGGGCAGGAAAAGTAGGCTTGGCACAAAGGTGGAATTTT GGTGATGGGAATCAGGAGCCTACCAGAAGAACCGCTCCTTTGTTCACCAC ATGACTCCTTGCTGCCGTAAAGCTTCATCTCAGCCAGCAAGCAAGCTGTG GTGAGATGTTTGCTTGAAGCATGGAGCCACTGCCGCGTTCACTGGATCCC CTCCCCCCCGGTCGTCGGACGATGCCTCCCAATTCTCGTCCTTGGGTGTG ACAACGCGCCGGGCTTGTACCAGCGGGGCACTAGGTCAGGGTAGTACGAC TCCCCTTCCCCCTCTCCCCTCCGTCATCAGAAAACGCCTGCCACCTCTGG AAGGTTTTGTAGTGCAGCGCTGGACTCGCTCAAGTAAAGCGCGACTACTT GGGTGGAAAAATCCACATCCGTCCCGCCCCCCTTGTTGGAAAACGCCTCC CACGTTTCTTGTTTCTGGCACGCAGCGCCGGATTTCTTCGAGTACTTCTC TGCGACGGCACCCCTGCTCGACCAGGACGAGACGCTCATGGCGGTTTCCG CCTGGAACGATAATGGTCAGGCCAGACACGTCAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10638:810..4144+

>mRNA_H-canaliculatus_F_contig10638.621.1 ID=mRNA_H-canaliculatus_F_contig10638.621.1|Name=mRNA_H-canaliculatus_F_contig10638.621.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1548bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10638:810..4144+ (Hapterophycus canaliculatus Oshoro5f female)
GAGATCTCGTCCGAGGATGGCATTAACCGGGAGGCCATACACGGAGCCTG
GAAGGGTGGCGTTGGTTGGGGCGTCGGCGCGAACGTCGGGGATGGTTCGT
GGAAGGATGGGGTGAGCCTGAGAGATCTCGTCCGAGGATGGCATTAACCG
GGAGGCCATACACGGAGCCTGGAAGGGTGGCGTTGGTTGGGGCGTCGGCG
CGAACGTCGGGGATGGTTCGTGGAAGGATGGGGTGAGCCTGAGCGGGAAC
GGCGGCGACGGCGGCACCGCCGCCGTCGCCGCCGCTGAAGAACTTAGAGG
GGCGGTCAGGTGGGAACCGGGGCAGCTGACCAAGCTCGTCGAGCTGCAGG
AGCAGCAGCGAGTCGAGGAGGACGAGGAGGAGTGGGGGGGGGTGAGCAGG
GCTCCGATGTTGGGGTCGGACGCTGCGCTTTTGGTCATCTGCGCCAACAG
GCGGGAACGGCGGCGACGGCGGCACCGCCGCCGTCGCCGCCGCTGAAGAA
CTTAGAGGGGCGGTCAGGTGGGAACCGGGGCAGCTGACCAAGCTCGTCGA
GCTGCAGGAGCAGCAGCGAGTCGAGGAGGACGAGGAGGAGTGGGGGGGGG
TGAGCAGGGCTCCGATGTTGGGGTCGGACGCTGCGCTTTTGGTCATCTGC
GCCAACAGGCCGGAATACCTCGAGCGAACACTACGAGCGGTCGCCGAGTA
CCACCCCGGGAGTTCCAGAGGCGCGGCGTACGCAATACCCGTGGTGGTTT
CCCAGGACGGGACGTCACAGAGAGTGGCAGACGTCATCTCCAAATTTAAG
GCCGGAATACCTCGAGCGAACACTACGAGCGGTCGCCGAGTACCACCCCG
GGAGTTCCAGAGGCGCGGCGTACGCAATACCCGTGGTGGTTTCCCAGGAC
GGGACGTCACAGAGAGTGGCAGACGTCATCTCCAAATTTAAGACCTCGAT
GGCGGGGCGTTCTTATGTGATTCACATCCAGCACGAGCCTACGCGGGGAG
AAAGCCGCCCGTACTACAAGCTTTCGGCGCACTACAAGTGGGCGCTTAGC
CAGACCTCGATGGCGGGGCGTTCTTATGTGATTCACATCCAGCACGAGCC
TACGCGGGGAGAAAGCCGCCCGTACTACAAGCTTTCGGCGCACTACAAGT
GGGCGCTTAGCCAGGCGTTCGACGAGCTTGAGCGGGCAGGCTACAACTGG
GCGTTGAAGGACAAGGTCATTATCCTGGAGGAGGACCTTGAGATTGGCGT
TCGACGAGCTTGAGCGGGCAGGCTACAACTGGGCGTTGAAGGACAAGGTC
ATTATCCTGGAGGAGGACCTTGAGATTGCGCCGGATTTCTTCGAGTACTT
CTCTGCGACGGCACCCCTGCTCGACCAGGACGAGACGCTCATGGCGGTTT
CCGCCTGGAACGATAATGGTCAGGCCAGACACGTCAAGCGCCGGATTTCT
TCGAGTACTTCTCTGCGACGGCACCCCTGCTCGACCAGGACGAGACGCTC
ATGGCGGTTTCCGCCTGGAACGATAATGGTCAGGCCAGACACGTCAAG
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