mRNA_H-canaliculatus_F_contig10614.600.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10614.600.1
Unique NamemRNA_H-canaliculatus_F_contig10614.600.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 1.660e-102
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 1 
Query:    1 RSVSPQASDVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAA 579
            RSVSPQAS+VP LQEDSAEEVMLKVAAHTHYMPEHW GKAHTV VR ELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIV+FVTEHTV+V GVGSVCSYS+FDFGRYGDEDYAAPS ASMAEVG  + +R RRR DTTAQGKMEKSFLNFR HYPDWQPGPAGQEMIDRLAGFQLQCLRKDAE AAA
Sbjct:  412 RSVSPQASEVPTLQEDSAEEVMLKVAAHTHYMPEHWLGKAHTVVVRAELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERAR-RRRPDTTAQGKMEKSFLNFRAHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAA 603
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.000e-68
Identity = 140/195 (71.79%), Postives = 146/195 (74.87%), Query Frame = 1 
Query:    1 RSVSPQASDVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFR--THYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAA 579
            RSVSPQAS+VP LQEDSAEEVMLK                                      ELLAVLFAPVILCFSMPSCAQEIV+FVTEHTV+V GVGSVCSYS+FDFGRYGDEDYAAPS ASMAEVG  + +R RRR DTTAQGKMEKSFLNFR  THYPDWQPGPAGQEMIDRLAGFQLQCLRKDAE AAA
Sbjct:  403 RSVSPQASEVPTLQEDSAEEVMLK--------------------------------------ELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERAR-RRRPDTTAQGKMEKSFLNFRHVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAA 558
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A7S2STW1_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STW1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.600e-39
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 1 
Query:   25 DVPVLQEDSAEEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKD 561
            ++PV     A+E+M  V  HTH+ PE WR    T+ VR E L +F YKAQLF EE+L VL AP +LC++MP  A  I+ F+ +HTV  + +G+VC YSLFDF +YGDE Y AP+  +  E               T QGK+EKSFLNF+ ++P+W  G  G + I+RL  FQ   L  D
Sbjct:  184 NIPVEANLDADEMMEAVKEHTHFFPETWRRLCGTLRVRDEFLSMFKYKAQLFFEEILVVLAAPYVLCYAMPQAADRILAFIRDHTVHKDTIGAVCGYSLFDFRKYGDERYGAPNVRTDGEE--------------TEQGKLEKSFLNFKINHPEWDCGEEGNQFINRLVNFQEDHLHHD 348
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A7S2D6I8_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6I8_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.520e-36
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 1 
Query:  133 VRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRK 558
            VR +   +F +K QLF +E+L VL AP +LC SMP+ A++++ F+ EHTVDVEG+GSVC YSLFDFGRYGDE YAAP   S  + GR            T QGKMEKSFLNF+ ++PDW  G  G   I ++  FQ Q L +
Sbjct:    1 VRDQFFSIFKFKVQLFCDEILVVLLAPFVLCVSMPAAAEDMLRFIREHTVDVEGIGSVCGYSLFDFGRYGDERYAAPKDGSEVD-GR------------TEQGKMEKSFLNFKINHPDWDCGEQGNTFIAKICAFQEQQLEE 129
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A2P6V2C1_9CHLO (Autophagy-related 9 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2C1_9CHLO)

HSP 1 Score: 153 bits (386), Expect = 1.820e-35
Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 1 
Query:   55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAG 534
            E  +++V AHTHY+P HWRG+AHT EV+ +   LF YKA LF EEL ++L  P++L FS+P CA  ++ FV EHTV VEGVG VCS + FDF R+G+  Y AP+ A      R              QGKMEKSFL+F   Y  W+P  AGQ ++ +LAG
Sbjct:  523 ETALMEVVAHTHYLPRHWRGRAHTREVQGQFQALFQYKALLFWEELSSILLTPLLLWFSLPQCAGAVLAFVEEHTVHVEGVGDVCSLAAFDFQRHGNARYGAPAAAPKLLRSR--------------QGKMEKSFLSFAATYTGWEPDAAGQALLQQLAG 668
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A388JMX2_CHABU (Autophagy-related protein 9 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JMX2_CHABU)

HSP 1 Score: 150 bits (379), Expect = 1.280e-34
Identity = 81/177 (45.76%), Postives = 112/177 (63.28%), Query Frame = 1 
Query:   55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEIAAANT 585
            +E M  +A HTHYMP+HWRG A T  VR E   LF +KA+LFLEE++++   P IL FS+P CA+ IVDF+ + TV VEGVG VCS S+FDF  +G++ Y +P   S             RRS   +QGKMEKSF++F+ +YP+W+PG  G++++  L+ F+      D E  A  T
Sbjct:  583 QESMDVLAQHTHYMPKHWRGAADTDVVRAEFESLFQFKAKLFLEEMMSIFITPFILWFSLPKCAECIVDFIQDFTVYVEGVGHVCSLSVFDFEMHGNKRYGSPCHTSKD-----------RRS---SQGKMEKSFISFKANYPNWEPGDLGKKVLKTLSEFRSHQEELDVEQCAQAT 745
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A2K1JYE4_PHYPA (Autophagy-related protein 9 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JYE4_PHYPA)

HSP 1 Score: 149 bits (376), Expect = 2.440e-34
Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = 1 
Query:   61 VMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQLQ 546
            VM ++ +HTHYMP+HWRG  +T +VR E  GLF YKA LF EE+++++  P IL F++P C ++++ FV + TV +EGVG VCS S+FDF  +G+  Y +P   S             RRS   +QGKMEKSF++F+T+YP+W+P   G++++  LA F+L+
Sbjct:  449 VMRQITSHTHYMPKHWRGAENTDKVRIEFEGLFKYKAALFFEEIMSIIVTPFILIFALPKCVEDVLLFVEDFTVYIEGVGHVCSLSIFDFEHHGNSKYGSPFHTSKD-----------RRS---SQGKMEKSFISFKTNYPNWEPDGNGKQLMSVLADFRLR 596
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A9S9L7_PHYPA (Autophagy-related protein 9 (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9L7_PHYPA)

HSP 1 Score: 147 bits (371), Expect = 2.620e-34
Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1 
Query:   61 VMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLAGFQ 540
            VM ++ +HTHYMP+HWRG  +T +VR E  GLF YKA LF EE+++++  P IL F++P C ++++ FV + TV +EGVG VCS S+FDF  +G+  Y +P   S             RRS   +QGKMEKSF++F+T+YP+W+P   G++++  LA F+
Sbjct:  440 VMRQITSHTHYMPKHWRGAENTDKVRIEFEGLFKYKAALFFEEIMSIIVTPFILIFALPKCVEDVLLFVEDFTVYIEGVGHVCSLSIFDFEHHGNSKYGSPFHTSKD-----------RRS---SQGKMEKSFISFKTNYPNWEPDGNGKQLMSVLADFR 585
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: E1ZM33_CHLVA (Autophagy-related protein 9 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZM33_CHLVA)

HSP 1 Score: 145 bits (367), Expect = 3.650e-33
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 1 
Query:   55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFH-----YKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRLA 531
            E  +++V  HTHY+P HWRG+AHT EV+ E   LF      +KA LFLEEL ++L  P++L FS+P CA  ++ FV  +TV VEGVG VCS + FDF R+G+  Y +P+ A      R              QGKMEKSFL+F   YP W+P PAGQ+++ +LA
Sbjct:  394 EAALMEVVLHTHYLPRHWRGRAHTREVQQEFEALFQVGRQAFKALLFLEELSSILLTPLLLWFSLPQCAGAVLSFVESNTVYVEGVGDVCSLAAFDFQRHGNAKYGSPAAAPKLYRSR--------------QGKMEKSFLSFAATYPAWEPDPAGQQLLAQLA 543
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BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Match: A0A7J7PN86_9CHLO (Autophagy-related protein 9 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PN86_9CHLO)

HSP 1 Score: 145 bits (366), Expect = 4.600e-33
Identity = 73/158 (46.20%), Postives = 97/158 (61.39%), Query Frame = 1 
Query:   55 EEVMLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAPSTASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQEMIDRL 528
            E  M +V  HTH++P HWRG+AH+ EV+  L  +F +K  LFLEEL +VL  P IL +S+P CA  I+ FV E T  VEGVG VCS ++FDFGR+G+  Y AP+ A    +              + QGKMEKSFL F   YP W+P  AG++M+  +
Sbjct:  470 ERAMAEVVLHTHHLPRHWRGRAHSAEVQQSLNSMFSFKLLLFLEELASVLLTPFILAYSLPRCAGAILQFVAETTTRVEGVGDVCSLAVFDFGRHGNSKYGAPAHAPAKRL-------------RSKQGKMEKSFLTFVATYPTWRPPAAGRQMLTNI 614
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10614.600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF2_ECTSI1.660e-10290.16Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K9U8_9PHAE1.000e-6871.79Autophagy-related protein 9 n=1 Tax=Ectocarpus sp.... [more]
A0A7S2STW1_9STRA4.600e-3945.25Autophagy-related protein 9 (Fragment) n=1 Tax=Rhi... [more]
A0A7S2D6I8_9STRA1.520e-3651.41Autophagy-related protein 9 (Fragment) n=1 Tax=Flo... [more]
A0A2P6V2C1_9CHLO1.820e-3548.75Autophagy-related 9 n=1 Tax=Micractinium conductri... [more]
A0A388JMX2_CHABU1.280e-3445.76Autophagy-related protein 9 n=1 Tax=Chara braunii ... [more]
A0A2K1JYE4_PHYPA2.440e-3445.06Autophagy-related protein 9 n=1 Tax=Physcomitrium ... [more]
A9S9L7_PHYPA2.620e-3445.00Autophagy-related protein 9 (Fragment) n=1 Tax=Phy... [more]
E1ZM33_CHLVA3.650e-3346.34Autophagy-related protein 9 n=1 Tax=Chlorella vari... [more]
A0A7J7PN86_9CHLO4.600e-3346.20Autophagy-related protein 9 n=1 Tax=Scenedesmus sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10614contigH-canaliculatus_F_contig10614:287..4733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.8
Seed ortholog evalue8.4e-82
Seed eggNOG ortholog2880.D7FZF2
Preferred nameATG9A
KEGG koko:K02349,ko:K17907,ko:K19672
KEGG TC9.A.15.1
KEGG Pathwayko04136,ko04137,ko04138,ko04140,map04136,map04137,map04138,map04140
GOsGO:0000003,GO:0000045,GO:0000139,GO:0000272,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0001817,GO:0001818,GO:0001894,GO:0001932,GO:0001934,GO:0002165,GO:0002376,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007552,GO:0007586,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009251,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010498,GO:0010562,GO:0010604,GO:0010623,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0012501,GO:0012505,GO:0012506,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016052,GO:0016192,GO:0016236,GO:0016237,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019954,GO:0022411,GO:0022600,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030054,GO:0030154,GO:0030163,GO:0030277,GO:0030587,GO:0030659,GO:0031090,GO:0031152,GO:0031153,GO:0031224,GO:0031288,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032258,GO:0032268,GO:0032270,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032588,GO:0032648,GO:0032688,GO:0032872,GO:0032874,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034599,GO:0034613,GO:0034727,GO:0035069,GO:0035096,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042592,GO:0042594,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043632,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044804,GO:0044805,GO:0045087,GO:0045937,GO:0046328,GO:0046330,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051603,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055037,GO:0055114,GO:0060033,GO:0060249,GO:0060255,GO:0060729,GO:0061709,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070302,GO:0070304,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071704,GO:0071840,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090382,GO:0090702,GO:0097708,GO:0098542,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1902533,GO:1903008,GO:1905037
EggNOG free text desc.process utilizing autophagic mechanism
EggNOG OGsKOG2173@1,KOG2173@2759
EC2.7.7.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029,ko03036,ko03400,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAutophagy-related protein 9
Ec32 orthologEc-19_003090.1
Exons8
Model size1690
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10614.600.1prot_H-canaliculatus_F_contig10614.600.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10614 350..3421 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928717.60512-UTR-H-canaliculatus_F_contig10614:286..3491622928717.60512-UTR-H-canaliculatus_F_contig10614:286..349Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 287..349 +
1696845537.5038426-UTR-H-canaliculatus_F_contig10614:286..3491696845537.5038426-UTR-H-canaliculatus_F_contig10614:286..349Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 287..349 +
1622928717.7362242-UTR-H-canaliculatus_F_contig10614:3421..34261622928717.7362242-UTR-H-canaliculatus_F_contig10614:3421..3426Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 3422..3426 +
1696845537.5773337-UTR-H-canaliculatus_F_contig10614:3421..34261696845537.5773337-UTR-H-canaliculatus_F_contig10614:3421..3426Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 3422..3426 +
1622928717.7589967-UTR-H-canaliculatus_F_contig10614:3881..39881622928717.7589967-UTR-H-canaliculatus_F_contig10614:3881..3988Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 3882..3988 +
1696845537.5860972-UTR-H-canaliculatus_F_contig10614:3881..39881696845537.5860972-UTR-H-canaliculatus_F_contig10614:3881..3988Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 3882..3988 +
1622928717.7757587-UTR-H-canaliculatus_F_contig10614:4334..47331622928717.7757587-UTR-H-canaliculatus_F_contig10614:4334..4733Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 4335..4733 +
1696845537.5949614-UTR-H-canaliculatus_F_contig10614:4334..47331696845537.5949614-UTR-H-canaliculatus_F_contig10614:4334..4733Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10614 4335..4733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928717.6227932-CDS-H-canaliculatus_F_contig10614:349..3581622928717.6227932-CDS-H-canaliculatus_F_contig10614:349..358Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 350..358 +
1696845537.5157306-CDS-H-canaliculatus_F_contig10614:349..3581696845537.5157306-CDS-H-canaliculatus_F_contig10614:349..358Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 350..358 +
1622928717.6362562-CDS-H-canaliculatus_F_contig10614:836..9501622928717.6362562-CDS-H-canaliculatus_F_contig10614:836..950Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 837..950 +
1696845537.5259862-CDS-H-canaliculatus_F_contig10614:836..9501696845537.5259862-CDS-H-canaliculatus_F_contig10614:836..950Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 837..950 +
1622928717.666233-CDS-H-canaliculatus_F_contig10614:1518..16671622928717.666233-CDS-H-canaliculatus_F_contig10614:1518..1667Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 1519..1667 +
1696845537.54221-CDS-H-canaliculatus_F_contig10614:1518..16671696845537.54221-CDS-H-canaliculatus_F_contig10614:1518..1667Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 1519..1667 +
1622928717.6862-CDS-H-canaliculatus_F_contig10614:1892..20271622928717.6862-CDS-H-canaliculatus_F_contig10614:1892..2027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 1893..2027 +
1696845537.5514412-CDS-H-canaliculatus_F_contig10614:1892..20271696845537.5514412-CDS-H-canaliculatus_F_contig10614:1892..2027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 1893..2027 +
1622928717.7023737-CDS-H-canaliculatus_F_contig10614:2419..28941622928717.7023737-CDS-H-canaliculatus_F_contig10614:2419..2894Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 2420..2894 +
1696845537.5595698-CDS-H-canaliculatus_F_contig10614:2419..28941696845537.5595698-CDS-H-canaliculatus_F_contig10614:2419..2894Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 2420..2894 +
1622928717.7178698-CDS-H-canaliculatus_F_contig10614:3187..34211622928717.7178698-CDS-H-canaliculatus_F_contig10614:3187..3421Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 3188..3421 +
1696845537.5682392-CDS-H-canaliculatus_F_contig10614:3187..34211696845537.5682392-CDS-H-canaliculatus_F_contig10614:3187..3421Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10614 3188..3421 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10614.600.1

>prot_H-canaliculatus_F_contig10614.600.1 ID=prot_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=372bp
MLKVAAHTHYMPEHWRGKAHTVEVRTELLGLFHYKAQLFLEELLAVLFAP
VILCFSMPSCAQEIVDFVTEHTVDVEGVGSVCSYSLFDFGRYGDEDYAAP
STASMAEVGRRDDSRARRRSDTTAQGKMEKSFLNFRTHYPDWQPGPAGQE
MIDRLAGFQLQCLRKDAEIAAANTAAAVAAATAAAAAAAGAAGATGGAAT
PVGGGGGGGGTGSHWGQNLHGSSGGARGQGLQSGAGVGGAARGGGGGSTA
AATVTPALRRTGLLGNLDRDQDGADSDEKNKAGGGGGGGGGGDGSITVPG
PDTLVPPAWTVELGVPVYAAGAWRGSVAGRYGGCRRRRKRGVRGVDGHSL
VRPDVAACTLPHVSHWRPAWE*
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mRNA from alignment at H-canaliculatus_F_contig10614:287..4733+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10614.600.1 ID=mRNA_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4447bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10614:287..4733+ (Hapterophycus canaliculatus Oshoro5f female)
AGGAGCGTGTCCCCTCAGGCGTCGGACGTACCGGTCCTCCAGGAAGACTC
GGCGGAAGAGGTCATGCTCAAGGTACCAAAAGCAGCCGCAGCCGCAGCCG
CAGCAGTATCAGAGCGGCGGCAGCAGCGAAGAAGTCTGTTGGCAATGGCA
GCGGGAATCCCGGCTATTTTGAGGGAGCTGATGGGCGGGAACGCTGTAGG
ACACAGGGCTAAGTGTCGTGAAGAGCTCTCCGTGCAACGACCCGGTCGGG
ACGCAAGCCGGCGGCGGCAACGGGGGCTAGAGTAGAGGCCAGATTGTGAC
GGGCGTGCATATCCCGACTGCTGCGGTGGACGGCCATGGTTTCCTCCAAT
CTTAAAAATTTCCCTTGAGCAGGCGTTTTTCTACACGGCTTTTCTCGCAG
CGAGTCGCATGTGCACCCGGAAATCTATCTACTGGTGTCCATCCGTTTTA
TGACCACCCCGCGACCTCATACCTTACCGAAATACTCCCCTCCCCCCTCC
CTCCTCCCCCCTCCCCGTCCTTCCCATCGAAAACGCCATGAACGACGCAG
GTGGCGGCGCATACTCACTACATGCCGGAGCACTGGCGGGGCAAGGCTCA
CACGGTGGAGGTCCGCACGGAGCTTCTGGGGCTGTTCCACTACAAGGCTC
AGCTGTTTCTCGAGGTGCCAAAGCCCCTGCCTTGTAGGCTCTCCACCAAA
AAGCATTTTTTTTTCCCCGCTGATTGTTCCAACGAACAGCGTTTTCGTTT
TCGGCGCGGCGTCACGACTTCCGTCCATACCGTGCAGTCAAGGGGAAAAA
ATACATTTATCCCCTATCCTGTCGTCTGTGCCCCCTCTTCTTCACCCCTT
CAGCCTTGCCAAGATCCCCGTCGTGTCTTCGATCCTACGCAAAAGGTGTC
TCGCCGTTGCCTCGTCGAACCCCTGATTGCCCCCGCCCCGCGCGCCTGCG
GCGGGGTGCTCGTTGAAAAATGCGAAACTTCCAAGCAAGCGCACACGCTC
TTTCTTCGCCCGCCTCCCCGTCTCTCCCCGACCCCTGGCCACCACCCACC
CCGCCACACCTCTCACCCGCTCGCCGGTGTTTCCCGTTGTCTTCCTCTCC
GCGATTTAGTGGGGGTGTTCCAGCCATCAGGGTTCACGCCATCAGCCTTC
ACGCCACCGCTGTCGCTATCACTGCCGCTAACGCCTTCTCTGTCGCCGCC
GCTGCTGTCGTCGTCGTTTTGGGTTGCCGTAGGAGCTTCTGGCGGTCCTG
TTCGCGCCCGTGATCCTGTGCTTCTCCATGCCGAGCTGCGCGCAGGAGAT
CGTGGACTTCGTGACGGAGCACACGGTGGATGTGGAGGGGGTCGGTTCGG
TGTGCAGCTACAGCCTCTTCGACTTCGGGAGGTGAAGCGCCTGCTCTTGC
TCGTTGTCGTCGCTATTTTTGGTTGTCGTTGTTGTTGTTGTTGTTGTTGC
TGTTGTTGTGACTCGACTCATGCGGACCCGGGCGTGGAGCGAAGTGCGCA
GACGAGCCGCAAGTCTTTCGAAACGCCGATGAGGTTTCCAGTCCGCGAAA
CCAGAAAAGTCCATGATTTCGTATCCCTTGGAAACCACCCGTGCACGAAC
ACCCAGGTACGGGGACGAGGACTACGCAGCCCCGTCGACGGCTTCGATGG
CGGAAGTCGGGAGGCGAGACGACAGCAGAGCTCGGCGACGGTCGGACACG
ACGGCACAGGGGAAGATGGAGAAGTCCTTCCTCAACTTCAGGTAGGTTGA
GCGTAGACCTACGACTCGCTCGCGCGCCTGCGCTTGCCGAGCGGGGACGA
GGGGCCCGAAAACGGTCTATAATAGATGGTGAGGTTGCTGTTTTGCTGAT
GACAGTGGCCCCTCCGTCATCAATTTGGTCATCGTCATCGGCGCCCTCGA
TACCCCCCCTGCTGCCGCCGCTGCCGCCGCTGCCGCTGCCGCTGCTGCCG
CCGCTGAGCTGCTGCGACCGTGTTTTCGTGTTGGGGCGCTTGATGGCCCT
CGACAGCCCGTGGAATCGAACGAACAAAGACGTTGATCCTCCATTCGTTT
TGTTCGTTCCTCGATATATTTCGCTCGTCGGTTTTTCGGTGTTGCCCCCC
CTCCCCCCCCCCGCCCCCCCCCCGCTCTCACAGGACGCACTACCCCGACT
GGCAGCCGGGACCCGCGGGCCAAGAAATGATCGATAGGCTGGCCGGGTTC
CAGCTGCAGTGCCTCCGGAAGGACGCCGAGATAGCGGCGGCAAACACGGC
GGCGGCGGTCGCGGCAGCGACGGCGGCGGCGGCCGCAGCGGCGGGGGCCG
CGGGGGCAACAGGCGGGGCGGCGACGCCGGTAGGAGGGGGGGGAGGCGGT
GGAGGAACAGGGTCGCATTGGGGGCAAAACCTCCACGGCAGCAGCGGGGG
CGCAAGGGGCCAAGGCTTGCAGTCAGGAGCGGGAGTCGGAGGAGCAGCGA
GAGGCGGCGGCGGCGGCTCGACCGCCGCCGCCACCGTCACCCCAGCGCTG
CGCCGCACAGGCCTCCTCGGAAACCTGGACCGCGATCAGGACGGCGCCGA
TTCCGACGAAAAAAATAAGGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGACGGCGTCGGCGGCCAAGACAGGGCCGGAGAACGGGTTTTCGCGACC
GACCACGACGACAAGACCTCCGACAAGGACGGCGGAGGTGCCAACGGCGA
CGGCGCCGACGACCATGAGCGGGGGAGCGATCATCACGCGTCCCCAGGAT
CGTTCCCTCCACTCTTCTCTCCCGAGCGCGACGGTTCGGCGGAAGGGGCG
GACCAAGCCAGCCTCGGCCCCCTCGGTGGCGGCGCGGGCGGCGGCGGATA
CACAGCCAGCGGCTACCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGA
GAGCATCACCGTCCCCGGGCCTGACACCCTCGTCCCTCCAGCTTGGACTG
TTGAACTCGGTGTCCCCGTCTATGCTGCTGGGGCCTGGCGCGGGAGCGTG
GCTGGGCGCTACGGGGGGTGCCGGCGGCGGCGGAAACGGGGTGTTCGGGG
CGTCGATGGCCACTCCCTCGTTCGTCCAGACGTCGCAGCTTGCACCCTTC
CTCATGTCTCACATTGGCGGCCCGCATGGGAGTAGTTTCGGTGAGTGGGT
GGGGATGGGGGTGTTTGTGATGTTTGTGTTTGTGGTGTTTGTGTTTGTGG
TGTTTGTGGCTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGACAGG
GGGGTGGTATCGAGGCGTGTTTTAGGCAGACTGCTACTCTGTTTACGGGG
TCCGGCTGCTGGCTTGCGGCGGAACGGGTCAACGCCTTTTCGCATCCCGC
TGTGTTTTCCGAGTCGCCAGGTAGAGTAGGGCGTGGTGAGCGTGCACGTG
TGCTCTTGTCTAGGGCGATTCGAGTAATGTCGGTGTCGGAGAGATAACAG
GCATGAACGCGGACCGGTATAGATGGTGCACCCGTTTCCAAGCCGAAGAA
GGGGTGGTCGACGCACGTCGGCTCCGAGACAAACGTGCACTCAAGATGCA
AAAGGAATGAGCGCGTCTCCCTCCCCCTCTCCCGACAAACCACAGCAGGA
GCAGCAGGAGCCCCGTCGTTCTTGGGGCGAACGACTAGTAATGGCGCCCC
CGCCGCTGCTGGGCCCGTCGGGCAGGAGAACAACTTCTACTGGCTCGAGA
GGGTGAGCGCTTCTCCCCCCTCCCCCCCCGCCGAAAACGTGTTTTATGGC
TGCAGTTTGACGTGCTTGCTGGAGCTGAGCGGTTTCTCAACTACGGCGTT
GTCCTTTTGGAACGGCCCGGCGGCCTCTTCATCGTCTCCCGCCTTTTCAA
GTTTCCTGTTGGCTGCCTCTGGGCAAAAGGTTGAACCGAGCGCGCCGGGC
ATTACCCAAAGCCTCGTTCGTGACACGACCACTGTTGAATGCATCCACCG
TGCGTTCGAAGTCCTTGCGAGCTCTTCCCCTTTGCCATCCCTGCCGTCCA
AGCAACCAACGCACCACGTGTCCGACGGTTGCACCCAATCGCTGCCAGTT
TTACGCCGCCCACAGGAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCC
TGTCCTTTGCCTCCGGAGTAGGAGGACTAGGGGCAGGAGCAGCAGGAGGA
GGAGACATCGGCGCAAGGGCGGCGGCAGCATCCACGGCCTCGTTGGCGGG
TTTGATGAGCCAAGGAGGCGGTGGCGGTGTTGGCGGTGGGGGGGGGGGTT
CGAGGTTTGCGGCGGCGGGAGGACCCGGGAGGGGAGGGGGTGTTGAGGGA
GGCATGCGTTCCTCCCTCCGCCCCCAGCATCCCAATCGTCACGGCCACGG
CGGGTTTTCCAGCGTAGGCGGGTCGGTTATCGCGGGGCGCAGGAGGAGGA
GCGGCGGTGGTAGTAGTGCGGTGGTAGAGGGGGGGGACGGGGGTGTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10614:287..4733+

>mRNA_H-canaliculatus_F_contig10614.600.1 ID=mRNA_H-canaliculatus_F_contig10614.600.1|Name=mRNA_H-canaliculatus_F_contig10614.600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2232bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10614:287..4733+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCTCAAGATGCTCAAGGTGGCGGCGCATACTCACTACATGCCGGAGCA
CTGGCGGGGCAAGGCTCACACGGTGGAGGTCCGCACGGAGCTTCTGGGGC
TGTTCCACTACAAGGCTCAGCTGTTTCTCGAGGTGGCGGCGCATACTCAC
TACATGCCGGAGCACTGGCGGGGCAAGGCTCACACGGTGGAGGTCCGCAC
GGAGCTTCTGGGGCTGTTCCACTACAAGGCTCAGCTGTTTCTCGAGGAGC
TTCTGGCGGTCCTGTTCGCGCCCGTGATCCTGTGCTTCTCCATGCCGAGC
TGCGCGCAGGAGATCGTGGACTTCGTGACGGAGCACACGGTGGATGTGGA
GGGGGTCGGTTCGGTGTGCAGCTACAGCCTCTTCGACTTCGGGAGGAGCT
TCTGGCGGTCCTGTTCGCGCCCGTGATCCTGTGCTTCTCCATGCCGAGCT
GCGCGCAGGAGATCGTGGACTTCGTGACGGAGCACACGGTGGATGTGGAG
GGGGTCGGTTCGGTGTGCAGCTACAGCCTCTTCGACTTCGGGAGGTACGG
GGACGAGGACTACGCAGCCCCGTCGACGGCTTCGATGGCGGAAGTCGGGA
GGCGAGACGACAGCAGAGCTCGGCGACGGTCGGACACGACGGCACAGGGG
AAGATGGAGAAGTCCTTCCTCAACTTCAGGTACGGGGACGAGGACTACGC
AGCCCCGTCGACGGCTTCGATGGCGGAAGTCGGGAGGCGAGACGACAGCA
GAGCTCGGCGACGGTCGGACACGACGGCACAGGGGAAGATGGAGAAGTCC
TTCCTCAACTTCAGGACGCACTACCCCGACTGGCAGCCGGGACCCGCGGG
CCAAGAAATGATCGATAGGCTGGCCGGGTTCCAGCTGCAGTGCCTCCGGA
AGGACGCCGAGATAGCGGCGGCAAACACGGCGGCGGCGGTCGCGGCAGCG
ACGGCGGCGGCGGCCGCAGCGGCGGGGGCCGCGGGGGCAACAGGCGGGGC
GGCGACGCCGGTAGGAGGGGGGGGAGGCGGTGGAGGAACAGGGTCGCATT
GGGGGCAAAACCTCCACGGCAGCAGCGGGGGCGCAAGGGGCCAAGGCTTG
CAGTCAGGAGCGGGAGTCGGAGGAGCAGCGAGAGGCGGCGGCGGCGGCTC
GACCGCCGCCGCCACCGTCACCCCAGCGCTGCGCCGCACAGGCCTCCTCG
GAAACCTGGACCGCGATCAGGACGGCGCCGATTCCGACGAAAAAAATAAG
GCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGCGACGCACTACC
CCGACTGGCAGCCGGGACCCGCGGGCCAAGAAATGATCGATAGGCTGGCC
GGGTTCCAGCTGCAGTGCCTCCGGAAGGACGCCGAGATAGCGGCGGCAAA
CACGGCGGCGGCGGTCGCGGCAGCGACGGCGGCGGCGGCCGCAGCGGCGG
GGGCCGCGGGGGCAACAGGCGGGGCGGCGACGCCGGTAGGAGGGGGGGGA
GGCGGTGGAGGAACAGGGTCGCATTGGGGGCAAAACCTCCACGGCAGCAG
CGGGGGCGCAAGGGGCCAAGGCTTGCAGTCAGGAGCGGGAGTCGGAGGAG
CAGCGAGAGGCGGCGGCGGCGGCTCGACCGCCGCCGCCACCGTCACCCCA
GCGCTGCGCCGCACAGGCCTCCTCGGAAACCTGGACCGCGATCAGGACGG
CGCCGATTCCGACGAAAAAAATAAGGCCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGACGGCAGCATCACCGTCCCCGGGCCTGACACCCTCGTCCCT
CCAGCTTGGACTGTTGAACTCGGTGTCCCCGTCTATGCTGCTGGGGCCTG
GCGCGGGAGCGTGGCTGGGCGCTACGGGGGGTGCCGGCGGCGGCGGAAAC
GGGGTGTTCGGGGCGTCGATGGCCACTCCCTCGTTCGTCCAGACGTCGCA
GCTTGCACCCTTCCTCATGTCTCACATTGGCGGCCCGCATGGGAGTAGAG
CATCACCGTCCCCGGGCCTGACACCCTCGTCCCTCCAGCTTGGACTGTTG
AACTCGGTGTCCCCGTCTATGCTGCTGGGGCCTGGCGCGGGAGCGTGGCT
GGGCGCTACGGGGGGTGCCGGCGGCGGCGGAAACGGGGTGTTCGGGGCGT
CGATGGCCACTCCCTCGTTCGTCCAGACGTCGCAGCTTGCACCCTTCCTC
ATGTCTCACATTGGCGGCCCGCATGGGAGTAG
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