mRNA_H-canaliculatus_F_contig1061.596.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1061.596.1
Unique NamemRNA_H-canaliculatus_F_contig1061.596.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: D7FIP7_ECTSI (N-acetylglucosaminylphosphatidylinositol deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP7_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.200e-100
Identity = 195/411 (47.45%), Postives = 209/411 (50.85%), Query Frame = 3 
Query:  237 MAAFPTYELRHPVGVVIAHPDDESMFFAPTLTALERRGQRAALLCLSSGIERAASHRPRHAPSCSV*LFSGTQPSYDGAPVSRDVKVQLSKVRPSD*SFVSYKKGPLSQFFNLSVPGSDAANSSRAAPAGSFVSRRLCKPCTEFCAELPRENVGLSRILPYTTMFRLYASCNSNRRIRYRAPTYFCMYQPGQPSSFQPPRCDKPSLRPQPAGHQQGDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGS----SGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKRIHVPP 1457
            MAA P+Y LR  VGVVIAHPDDESMFFAPTLT L RRGQRAA+LCLSSG                                                                                                                                                                       DFYGLGQTRKRELVKAC VLGVEE DVVV+EHP+LQDGSTE WPADVVSSHV DFV+KFGI+T+LTFDE GVSGH DH AVNRGVALFLRTRAV   T  +  GS    S S +DAFAL TTG+LRKY G+LDMPWSLATS  PPLGAFFS+  A IAWAAMAAH SQFVWYRRLFV+FSRYAYVNTF R+HVPP
Sbjct:    1 MAATPSYALRGTVGVVIAHPDDESMFFAPTLTTLGRRGQRAAVLCLSSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------DFYGLGQTRKRELVKACGVLGVEEDDVVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRAVTRHTASIAEGSGSSSSSSTLDAFALVTTGILRKYSGMLDMPWSLATSYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFIRMHVPP 244
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A836C9C4_9STRA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.760e-36
Identity = 78/191 (40.84%), Postives = 108/191 (56.54%), Query Frame = 3 
Query:  882 GDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIA------WAAMAAHRSQFVWYRRLFVVFSRYAYVNTF 1436
            G+F GLG+ R +EL+ +C+  G+   +V VV    LQDG  E WPA+ V+ +V  FV++  I  +LTFD+ GVSGHP+H+AV RGV   L T                     + L++  + RKY+GVLD+           LG + S     ++      W AMAAHRSQ VW+RRLF++FSRY YVNT+
Sbjct:   50 GNFCGLGKLRHQELLLSCSRFGISMDNVEVVNDAALQDGKDECWPAEAVARYVGSFVQRRSIDLLLTFDQHGVSGHPNHIAVCRGVTTLLHT-------------CKARLPPVYVLQSVSLARKYIGVLDV-----------LGTWQSRLHRCVSLDPRQIWCAMAAHRSQLVWFRRLFMLFSRYTYVNTY 216
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A2P6TVW9_CHLSO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVW9_CHLSO)

HSP 1 Score: 145 bits (367), Expect = 6.950e-36
Identity = 89/199 (44.72%), Postives = 114/199 (57.29%), Query Frame = 3 
Query:  882 GDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSC--RPPLGAFFSNFRAGIAW----------AAMAAHRSQFVWYRRLFVVFSRYAYVNTFKR 1442
            G+  GLGQ R REL +AC++LG+   DV +V+ P+LQDG  + WPADVV+ HV+  V++     V TFD  GVSGHP+H+AV  GV   LR  A   S+      SS S    + LET G+LRKY  +LD P + AT+   R   G      R   AW           A+ AH SQ VWYRRL+++ SRY YVNT  R
Sbjct:   46 GNADGLGQLRSRELYRACSLLGMRRQDVTIVDDPQLQDGMQQRWPADVVAEHVAAAVQRLQPSRVYTFDAGGVSGHPNHLAVCAGV---LRWWAAAPSS-----SSSASLPQLWQLETVGLLRKYAALLDAPLAWATTALQRQRRG------RGQAAWHLCRQPRRAQQALLAHSSQMVWYRRLWLLLSRYMYVNTLVR 230
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: E1Z3W5_CHLVA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3W5_CHLVA)

HSP 1 Score: 145 bits (366), Expect = 8.010e-36
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 3 
Query:  882 GDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWS-LATSCRP-----PLGAFFSNFRAGI--AWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKR 1442
            G+ +GLGQ R +EL  AC++LG+E  D+V+V+ P L DG  + WP  VV++HV+  VR+F  + V TFD  GVSGHP+H+A   GV  +         T      S  +  + + LET G+ RKYL +L++P S L T  R      P  +     RA    AW A+ AHRSQ VWYRRL++V SRY Y+NTF R
Sbjct:   38 GNAHGLGQLRSQELRHACSLLGIEADDIVLVDDPSLPDGMLQQWPPAVVATHVAQAVRRFKPQQVYTFDAGGVSGHPNHLATCAGVLRWW--------TGTPSSSSLSNLPELWQLETVGLPRKYLALLEVPLSHLLTLLRRWQKPHPQKSLCIVVRARPRQAWRALLAHRSQMVWYRRLWLVMSRYMYINTFVR 224
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A8K1CU02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU02_PYTOL)

HSP 1 Score: 146 bits (368), Expect = 2.450e-35
Identity = 80/196 (40.82%), Postives = 119/196 (60.71%), Query Frame = 3 
Query:  879 QGDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGV--ALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKRIHVPPS 1460
            +G+F GLG  R +E++ +   +G+ + ++ V+E P+LQDG  E W  D ++S V D++ K  I  V TFD+ G+SGHP+H++V+ GV  A+  + +   ++     G    S V  +ALE+T ++ KY+GVLD    L +        F   FR    + AMA H SQFVWYRRLFV+FSRY ++NTF  +H PPS
Sbjct:   91 RGNFDGLGDIRAQEMIASGTFIGIAKENIHVLEDPKLQDGMKEQWSHDHIASIVLDYIEKHKINAVFTFDDYGISGHPNHISVHHGVKQAIVEQHKRCTNN-----GDQKTSPVRGWALESTNIIHKYIGVLDA-LVLPSLTGNTEHVFVFLFRPLWNYRAMALHYSQFVWYRRLFVIFSRYTFINTFLPMH-PPS 279
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A0P1B1F4_PLAHL (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1F4_PLAHL)

HSP 1 Score: 145 bits (367), Expect = 4.170e-35
Identity = 82/193 (42.49%), Postives = 114/193 (59.07%), Query Frame = 3 
Query:  879 QGDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLR------TRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFK 1439
            QG+F GLG  R +EL  + + +G+  G + V+E  +LQDG  + W    ++  V+ ++ +  I TV TFD+ GVSGHP+H+A   GV+  +R      + A  S    +V G        +AL++T +LRKYLGVLDM  S   S R     F   FR    + AMA HRSQFVWYRRLFV+FSRY ++NTF+
Sbjct:   99 QGNFDGLGDVRVKELKASASYIGLSSGHINVLEDFKLQDGMMKQWEVSYIAKIVTKYIEEHTIDTVFTFDDYGVSGHPNHIASYYGVSQAIRELEHKCSAATASDNTRIVRG--------WALQSTNILRKYLGVLDMALSYWES-RGTKQHFVFVFRPRWNYNAMALHRSQFVWYRRLFVIFSRYTFINTFR 282
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: UPI000644CFD3 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CFD3)

HSP 1 Score: 143 bits (361), Expect = 5.890e-35
Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = 3 
Query:  882 GDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKRI 1445
            G+  GLG+ R++EL ++C V+G+   +V VV   R+ DG  + WP  VV  H+   + ++ I  +LTFDE GVSGHP+H++V   V   +  +       + + G          LET  ++RKY+G+ D+ WS          ++ S    GI + AM  H+SQFVW+R LFV FSRY+Y+NT + I
Sbjct:   58 GNAEGLGKIREKELTESCKVMGINGSNVRVVNDDRMPDGMKQVWPQQVVKQHIQSLINEWNIDHILTFDEGGVSGHPNHISVFEAVRSIIEEQGQQRQNQNELTGEK--------LETVNIVRKYIGIGDIAWSYLVGGATTSNSYLSWQPFGINYLAMKQHKSQFVWFRHLFVFFSRYSYINTLRNI 237
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BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A6A5BWQ8_NAEFO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BWQ8_NAEFO)

HSP 1 Score: 146 bits (369), Expect = 8.910e-35
Identity = 83/209 (39.71%), Postives = 115/209 (55.02%), Query Frame = 3 
Query:  882 GDFYGLGQTRKRELVKACAVLGV---------------------EEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKRI 1445
            G+  GLGQ R REL ++C  LGV                     E   +V+V+H  L+DG  + W  ++++  V  FV+KF I T+LTFDERG+S HP+H+A   GV  F          +        + VD F LET+ ++RKYLGVLD+  SL  +    +  F  +     AW AM AH SQFVW+R+LFV+FSRY +VNTF ++
Sbjct:  159 GNVLGLGQERIRELERSCIELGVCNSNSDSSLSLVKSLSDLIRSENNKIVIVDHDELKDGMRQTWNTELIAQLVYKFVQKFNISTILTFDERGISDHPNHIATWNGVREFK---------IRCEREKCFNHVDVFQLETSSLIRKYLGVLDLIVSLHKNSDHNVTIFTPS--PLFAWKAMRAHHSQFVWFRKLFVLFSRYTFVNTFTKL 356
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A2D4CGD1_PYTIN (N-acetylglucosaminylphosphatidylinositol deacetylase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGD1_PYTIN)

HSP 1 Score: 144 bits (363), Expect = 1.150e-34
Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 3 
Query:  879 QGDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTF 1436
            +G+F GLG  R+RE++   A LG++   V V+E P+LQDG  E W  D ++S V  +++   I  V TFD+ GVSGH +H+AV+ GVA  +R   +  +T        G  V  + LE+T ++RKY+G+LD      +        F    R    + AMA H SQFVWYRRLFVVFSRY ++NTF
Sbjct:   93 RGNFDGLGDIREREMMACGAFLGLKSDRVHVLEDPQLQDGMQETWDHDHIASLVHKYIQDHSIDAVFTFDDYGVSGHANHIAVHHGVAKAVRAHHLQCNT------GRGRPVRGWMLESTNIVRKYIGLLDALVHFPSPTAASERMFVFLVRPWYNYRAMALHHSQFVWYRRLFVVFSRYTFINTF 272
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Match: A0A3M6VRW6_9STRA (N-acetylglucosaminylphosphatidylinositol deacetylase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRW6_9STRA)

HSP 1 Score: 142 bits (358), Expect = 7.000e-34
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = 3 
Query:  879 QGDFYGLGQTRKRELVKACAV-LGVEEGDVVVVEHPRLQDGSTEDWPADVVSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSSTVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSC-RPPLGAFFSNFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFK 1439
            +G+F GLG  R++EL KACA  +G+    V  +E P+LQDG    W    ++  V+D+V+K  I  V TFD+ GVSGHP+H+A   GV   +  +    +T+    G    AV  +ALE+T +LRKY+G+LD   S   S  R     F   F+    + AMA H+SQFVWYRRLFV FSRY ++NTF+
Sbjct:   97 RGNFDGLGSIREKEL-KACATYIGLSLEHVQALEDPKLQDGMENQWEVAHIAVIVADYVQKNEIDAVFTFDDYGVSGHPNHIATYNGVKQAICEQQEKCNTLTAEDGKETKAVRGWALESTKILRKYVGLLDTALSFWLSRQREDERQFVFVFKPLWNYNAMALHQSQFVWYRRLFVAFSRYTFINTFR 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1061.596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP7_ECTSI1.200e-10047.45N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A836C9C4_9STRA6.760e-3640.84N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A2P6TVW9_CHLSO6.950e-3644.72N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
E1Z3W5_CHLVA8.010e-3643.59N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A8K1CU02_PYTOL2.450e-3540.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1B1F4_PLAHL4.170e-3542.49N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
UPI000644CFD35.890e-3537.23hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6A5BWQ8_NAEFO8.910e-3539.71N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A2D4CGD1_PYTIN1.150e-3441.94N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A3M6VRW6_9STRA7.000e-3443.39N-acetylglucosaminylphosphatidylinositol deacetyla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1061contigH-canaliculatus_F_contig1061:23042..28455 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.5
Seed ortholog evalue8.7e-83
Seed eggNOG ortholog2880.D7FIP7
Preferred namePIGL
KEGG koko:K03434
KEGG ReactionR05917
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
GOsGO:0000225,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016254,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
EggNOG free text desc.N-acetylglucosaminylphosphatidylinositol deacetylase activity
EggNOG OGsCOG2120@1,KOG3332@2759
EC3.5.1.89
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPutative deacetylase LmbE-like domain
Ec32 orthologEc-27_000570.1
Exons3
Model size2477
Cds size756
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1061.596.1prot_H-canaliculatus_F_contig1061.596.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1061 24038..27730 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928717.2718415-UTR-H-canaliculatus_F_contig1061:23041..240371622928717.2718415-UTR-H-canaliculatus_F_contig1061:23041..24037Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1061 23042..24037 -
1696845537.3930292-UTR-H-canaliculatus_F_contig1061:23041..240371696845537.3930292-UTR-H-canaliculatus_F_contig1061:23041..24037Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1061 23042..24037 -
1622928717.34536-UTR-H-canaliculatus_F_contig1061:27730..284551622928717.34536-UTR-H-canaliculatus_F_contig1061:27730..28455Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1061 27731..28455 -
1696845537.4403193-UTR-H-canaliculatus_F_contig1061:27730..284551696845537.4403193-UTR-H-canaliculatus_F_contig1061:27730..28455Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1061 27731..28455 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928717.2856612-CDS-H-canaliculatus_F_contig1061:24037..244451622928717.2856612-CDS-H-canaliculatus_F_contig1061:24037..24445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 24038..24445 -
1696845537.4088283-CDS-H-canaliculatus_F_contig1061:24037..244451696845537.4088283-CDS-H-canaliculatus_F_contig1061:24037..24445Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 24038..24445 -
1622928717.3120124-CDS-H-canaliculatus_F_contig1061:24824..249411622928717.3120124-CDS-H-canaliculatus_F_contig1061:24824..24941Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 24825..24941 -
1696845537.4196224-CDS-H-canaliculatus_F_contig1061:24824..249411696845537.4196224-CDS-H-canaliculatus_F_contig1061:24824..24941Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 24825..24941 -
1622928717.3301957-CDS-H-canaliculatus_F_contig1061:27499..277301622928717.3301957-CDS-H-canaliculatus_F_contig1061:27499..27730Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 27500..27730 -
1696845537.4311137-CDS-H-canaliculatus_F_contig1061:27499..277301696845537.4311137-CDS-H-canaliculatus_F_contig1061:27499..27730Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1061 27500..27730 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1061.596.1

>prot_H-canaliculatus_F_contig1061.596.1 ID=prot_H-canaliculatus_F_contig1061.596.1|Name=mRNA_H-canaliculatus_F_contig1061.596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=252bp
MFRLYASCNSNRRIRYRAPTYFCMYQPGQPSSFQPPRCDKPSLRPQPAGH
QQGDFYGLGQTRKRELVKACAVLGVEEGDVVVVEHPRLQDGSTEDWPADV
VSSHVSDFVRKFGIKTVLTFDERGVSGHPDHVAVNRGVALFLRTRAVVSS
TVDVVGGSSGSAVDAFALETTGMLRKYLGVLDMPWSLATSCRPPLGAFFS
NFRAGIAWAAMAAHRSQFVWYRRLFVVFSRYAYVNTFKRIHVPPSATHPY
R*
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mRNA from alignment at H-canaliculatus_F_contig1061:23042..28455-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1061.596.1 ID=mRNA_H-canaliculatus_F_contig1061.596.1|Name=mRNA_H-canaliculatus_F_contig1061.596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5414bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1061:23042..28455- (Hapterophycus canaliculatus Oshoro5f female)
CTTCCGCGACAAGGATCCAGTGCGCCACAGCATCGAGTGGCTTCTCCGCA
CGGCGATCTCTCGCGGTCAGCCAACAGGCTGGGCGTTCTGGCCAGCCTCG
AGGAAAGAACCAGTCGTTCAGCGATCTGACGCCCCGAAGCTTCCAAAGTT
GCACACAGCAGGAGAGATCTACGACTTCTACTGCTGGTGGTGGGGCACCC
CCGCGGCCTCGCGGTGACGAGAGAGGGCAAACACCGATGGCTGCGTTTCC
CACGTACGAATTACGCCATCCCGTCGGCGTGGTCATCGCACACCCAGATG
ACGAGAGCATGTTCTTCGCCCCGACGCTCACGGCCTTGGAGCGCCGCGGG
CAGCGGGCTGCCTTGCTATGCCTGTCCTCAGGTATAGAGCGGGCCGCAAG
CCACCGCCCTAGGCATGCCCCAAGCTGTTCCGTTTAGCTGTTTTCAGGCA
CCCAGCCGTCATATGACGGTGCACCTGTAAGTCGGGATGTCAAGGTGCAA
TTATCGAAAGTACGGCCGAGCGATTAATCCTTTGTGAGCTACAAAAAGGG
CCCTCTATCACAATTTTTTAATTTGAGCGTGCCTGGTTCAGATGCCGCGA
ACAGTAGCAGAGCAGCACCGGCCGGGTCGTTTGTTTCGCGTAGGCTCTGT
AAGCCCTGCACGGAATTTTGCGCAGAGCTGCCGAGGGAAAACGTTGGGCT
GAGTCGTATCCTTCCGTATACGACCATGTTCCGCCTGTATGCTTCCTGTA
ACAGCAACCGACGGATTCGATATCGCGCACCAACCTACTTTTGTATGTAT
CAACCTGGTCAACCATCGAGTTTCCAACCTCCGAGATGCGACAAACCGTC
CTTACGCCCCCAACCTGCTGGCCATCAACAAGGCGACTTCTACGGGCTCG
GGCAAACGCGCAAGCGCGAACTGGTGAAGGCGTGTGCGGTGCTCGGGGTT
GAGGAGGTGAACCCATAGGCATGTTGGGTGTGGAACGATGACAACGCGGG
GTTGCAACTCGGATGGTGGGTGTCTGGAGCAGGTGTACCGGGCGGGTTCT
TCCCTCCGAGGAAAGTAGACACACCGAAAAGATGTTCACAACAAGACGTG
GGAGATGACCCGACTCCTCGGAGATAAATCGACGACAAATTTCGTTGTCC
GTGCATGTATTCTCCCGGTCGATAACGAGATGGATGGGTTGCACGGCTCG
TTTGAAAAATGCGGATTCGCACGTCTGCCTCGTAAAGCGCCTCGTATATC
CTTGAAGATATTTCCGCCGAAAACTGACTTCCGTACCTTCTGAACGTAGT
GCATGATATGAAGCGACCAATATTGTCTTGGCCAAGGTTATCTTGGGGCT
CTCCCAATTACTGCTTTGGGGCCCTCCATGATGTTTTCATCTTAATCGTG
TTATCGCTCCTTACACGGGTCTACGGTAGTGCGGTTGTGCACTCAAAGAG
ACGTCCAGCAGTAGATACTGTAAAAGAACGGCGTTTTCTTCACCGCACCT
TACAGTACCTGCCCACTCGTAAGAAACCAGAAACCGGGCCCAGCCTAAAT
TTCTTATGTGAGGCCAGAGCCAACTACCGCCCCACCATTTAGGAATTAGT
GTGGCACTCGTGGCCCAGCTTGGGCACTTTCTAAAACTTAAGAAACTCTC
AGCCTGACTTGCTAGTAGACGGCTTTCTTAAGAGCACACCGGTGCTGTAT
CGGGGTCATAGTTAAGACGCGCCCAAGAAACGTGGCGCGCTGCAGGAACT
CATGGGGCTGAAGCCTCGAGCTGATGGACGTCCAAGTCCCCGCTCGTTCT
CGAGTCGTGGCAATGGTGCAATGGCCGCTGTTATGTCATTGGTTTCGCTT
CGTCTTGCCCTTGCTGTCACCCATGGCGCTTCCTGAACATTAGATTGCAG
CGGTCGCCACCCGGCCAGAGCCTTTCGCTTATGCGATCCTCTGGGATTGT
CGAGGTGGGCGAGACAGGCGACAAACGGCTGCTCTTCGGCGTAATGGGCC
GTCCATCCAGCTTCTGCCATGCCACATACGATGCCAGTTGGACGGTCCCT
TACGGTGAAAGGGATCCGTTTCTCGCCCCTCTCGCCCACCTCGATAAGCT
CGATGATAGCATGAAGAAGAGGTTCTGACTGGGTGGCCATTCCTGCAAAC
CAGTTTTCAGGGAGCGGAATGGGTAACAGTAAGGGTCAAGACAAAGCGAA
ACCAATGACAGCAGGGTCAATTGCATCGTTACGACGACTCAGGGATGACC
GCGGCCTTGGACACCCACCGGTTGAAGGTTTCGGCGAGTTGTACAAGTCC
CTGTGCAACCCTACTTACTGCGACGCACATGTACCGAGTCCGCCGCCGAT
GAAGCCGACACAATCTACTGAAGATATCTAGCCATGGCCATCCAACAATA
TTAGGCATGTATAACCTTCACTATTCTCACAGGTTATTACGCTTATGTGC
GGCCGACACACGGTTTTTCGTCCAATGCCTAGTCAGACAGGAGTAGCCAA
GGGTCTGCCGGGAGAAAAAACATGGACACGAAGCCCCCCCCCTCTTCCCG
GAAGGGAATTTCCCGAAAATTCTCACAATGTTTTGTCAAGCAATGTTTAA
GAAATTGATGAAAGAAACACCGAAAAGTCTTGTTGGCTGTGCAACGTTCG
TAGATTAGCTTCTGCTCGTTGCCCACTCTGTCCCAATTACCTCGGATGCC
GCCCGCGCTCACACGCACGTATGCACACAGGCATACGGTAGCGACAGCTC
GAACAAACGAAGTAGAATCATGCTTGCACGTAAGGCATACCCAGCCAAGT
TTCTCTGATCACCTCGCGAGACAGGCGACGAGCAGAGCAGCTGGTGCTCC
AGAAGATAGATTGGGATCTTCGCGAGAAGGCGGAGCTGGTCAAGATGAGC
TGGGGGGGGGGGCGGCGTGTATGCCACCTCAGCGGTCTCTGTGCCAAGGA
TCTGTGTACACAGCAGCTGACAGCTGACCGCACCCACCAACGCCCGGGCG
ATATAGTAGGGGATGACAGGCAGGGTGCCCGCCCCCCCCCCCCTCCTCAA
AGACTCTTCTTTTCAATTTCCGATCTTGGAGCCCATGTGTTCAGATTTGT
CTCCGGGTATGCCCTTGGAGCAGCGGCGAATTCTCTGTTAATCGCGTTGT
CGACAGATGATCGTCGGGCATTCCCCAACTTCCCGCATTTGTGCTTGAGC
AAGCAGAAGTTCGAATAGGCGAAAAGTGGAAATAGGTGCGGTAGGAGCAC
CCGTGTAGTTTCGTGTGAGCGAGAATGCGCCAGAAATATGTTCAGATCAA
ACGCACGATACACCCGACTCGTCGAAGATAGCTCGACAAGCGACCACATT
CGTGCTTGAGGTGCACCGGGACGAGAAGCGCCCAATGGTGCACCCTCTGT
GAGCAATATTTTAAGCTAGCGGCCCTTGACTCTCTCTCTTTCCCTCTCCC
TCTCGGTGGCTTCTATTTATCCTTCTCTTCTTCTGTCTCTCTGCCCATCT
CTCTATCTACGAAGGGGGACGTGGTGGTCGTCGAACACCCAAGACTCCAG
GATGGGAGCACGGAGGATTGGCCTGCGGACGTGGTGTCGTCTCATGTGTC
CGACTTTGTGCGCAAGTTCGGGATCAAGACGGTGAGAGCAGCATCCCACA
ACCCTGCATCCAGACTCTTCCAGTCATCTCCGGGGCGTGGCACCATTCCG
AAGACTTGCGTTTGCCCGCGCCCTTCGCGACCGTCTGGGCCGCTGCTTGC
TTCCTTACTCCATGTTAGCCCCGCGCGACTCCAGACTCAGATGCCGATCA
TCCTACCCTCCATGACGTTGCCCACGCGCTGTACCATAACTCACCAGCAC
CGTTAAGGGTCACGGTTGTTTGAAGACTATATAGCGAGGGGGGGTTGGCG
GAGACCGATCCAGAGTTGTCCCTCCCAGCCAGGACGTTGCGGCCTCCTCG
GCTGTATTGAGAATTGCTGCTGGATTTTCGGCGCTTTCCGTGGCTTCTCT
ATCTCCGCAGGTGCTGACGTTCGACGAGAGGGGTGTCTCGGGGCACCCGG
ATCACGTCGCCGTAAACCGCGGGGTAGCGCTGTTCCTCCGGACACGAGCC
GTAGTCAGCAGCACAGTCGACGTCGTCGGCGGCAGCAGCGGCAGTGCTGT
GGATGCCTTCGCGCTGGAAACCACGGGGATGTTGCGCAAGTACTTGGGCG
TGCTGGACATGCCTTGGTCCTTGGCGACGTCCTGCCGCCCGCCGCTGGGG
GCGTTCTTTTCGAACTTCCGCGCGGGGATAGCGTGGGCGGCGATGGCGGC
GCACCGCAGCCAGTTCGTGTGGTACCGCAGGCTATTCGTCGTGTTCTCGC
GCTACGCGTACGTGAACACCTTCAAGCGCATTCACGTGCCGCCGTCGGCG
ACACATCCGTACAGATGACTCGAGAGAGTGTGGCTCGACCTGGTTTCAAG
GTGGAACTCCCCAGAGCTGTACGACACTTTTCATTGCGTTTGTGTAATTG
GCTAGAGAGGTTATTTGTGGTTTCAGCAGAAGGAGAACGACTTCGTGCTT
TGGTGGATTCTCGGACAGTGGGTGTCGGCTTTGACCATGTCACTGCTCCA
TGGATTGGTCTGGTTGAGGTTGCGTGTATTCCAGAAATTCAGGAGTGCGA
TGGTATGTTCTTACTTGTTTCCTGGAACTCGCACGGGCGCTCGTCCGTCC
CCCGTTGATGGTAAATCCGCCATGGTCCAGTGGCCGTAGAATACCGAGTA
CAGCTCAATATTCTAGCCTCCGACACAAACAGAGTGGCGAGCTGAAACTT
CCAGCTGCGATGGAGGGTTTTCGTTGCTTGAAAGAGCGGAGTCACCTCCG
GGGACGTTTCGTCTTTTTGTGTCTTCAAAGGCCGTCTTCGAAAATCTACA
GTACACTAGGCCACGAACTTGATCGTTGTATATATCTTGGTCGATCTTTC
TCTTACGGAATCCCCCTTCGGTGTGCATGTGTACAGTGCCGGGTGTAGCC
CCGAGTGCACCAAATATGGCGTTGTCTCAGTAGGAAAGTAGAAGTGCGGG
CCATCGTGAAAGAAAGGCGTTCTGTGGAATCAGATAAGCCCTGCGGAAAG
AAACCTGATTCTTGTTAGTTTTAGAGGCTTTGATTCTGCTACAGGGTTCA
TGCCTTCGGATTGGACAAGAAATAAATAAAATAGGGTCCCGGCCCAGTCT
TAGTTCTCCCAGTCCAAGGTTCTTGGCAGGCTGTAACTAATGGAAACCAG
GGAATTCTTTCATGTGCGTTCTGCGTGCCGCCCTATACTGCTTGCCGTGA
TGCATACGTCTGCTGCTCCAATGTCAAATTCCTTCAAAAATATCGATAAG
GTATAGGTACGATTATGGCTGCTAATCGTCGCGGTTCTAAAGGCGAAATT
GGTCAGGATCGTCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1061:23042..28455-

>mRNA_H-canaliculatus_F_contig1061.596.1 ID=mRNA_H-canaliculatus_F_contig1061.596.1|Name=mRNA_H-canaliculatus_F_contig1061.596.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1061:23042..28455- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTCCGCCTGTATGCTTCCTGTAACAGCAACCGACGGATTCGATATCG
CGCACCAACCTACTTTTGTATGTATCAACCTGGTCAACCATCGAGTTTCC
AACCTCCGAGATGCGACAAACCGTCCTTACGCCCCCAACCTGCTGGCCAT
CAACAAGGCGACTTCTACGGGCTCGGGCAAACGCGCAAGCGCGAACTGGT
GAAGGCGTGTGCGGTGCTCGGGGTTGAGGAGATGTTCCGCCTGTATGCTT
CCTGTAACAGCAACCGACGGATTCGATATCGCGCACCAACCTACTTTTGT
ATGTATCAACCTGGTCAACCATCGAGTTTCCAACCTCCGAGATGCGACAA
ACCGTCCTTACGCCCCCAACCTGCTGGCCATCAACAAGGCGACTTCTACG
GGCTCGGGCAAACGCGCAAGCGCGAACTGGTGAAGGCGTGTGCGGTGCTC
GGGGTTGAGGAGGGGGACGTGGTGGTCGTCGAACACCCAAGACTCCAGGA
TGGGAGCACGGAGGATTGGCCTGCGGACGTGGTGTCGTCTCATGTGTCCG
ACTTTGTGCGCAAGTTCGGGATCAAGACGGGGGACGTGGTGGTCGTCGAA
CACCCAAGACTCCAGGATGGGAGCACGGAGGATTGGCCTGCGGACGTGGT
GTCGTCTCATGTGTCCGACTTTGTGCGCAAGTTCGGGATCAAGACGGTGC
TGACGTTCGACGAGAGGGGTGTCTCGGGGCACCCGGATCACGTCGCCGTA
AACCGCGGGGTAGCGCTGTTCCTCCGGACACGAGCCGTAGTCAGCAGCAC
AGTCGACGTCGTCGGCGGCAGCAGCGGCAGTGCTGTGGATGCCTTCGCGC
TGGAAACCACGGGGATGTTGCGCAAGTACTTGGGCGTGCTGGACATGCCT
TGGTCCTTGGCGACGTCCTGCCGCCCGCCGCTGGGGGCGTTCTTTTCGAA
CTTCCGCGCGGGGATAGCGTGGGCGGCGATGGCGGCGCACCGCAGCCAGT
TCGTGTGGTACCGCAGGCTATTCGTCGTGTTCTCGCGCTACGCGTACGTG
AACACCTTCAAGCGCATTCACGTGCCGCCGTCGGCGACACATCCGTACAG
ATGAGTGCTGACGTTCGACGAGAGGGGTGTCTCGGGGCACCCGGATCACG
TCGCCGTAAACCGCGGGGTAGCGCTGTTCCTCCGGACACGAGCCGTAGTC
AGCAGCACAGTCGACGTCGTCGGCGGCAGCAGCGGCAGTGCTGTGGATGC
CTTCGCGCTGGAAACCACGGGGATGTTGCGCAAGTACTTGGGCGTGCTGG
ACATGCCTTGGTCCTTGGCGACGTCCTGCCGCCCGCCGCTGGGGGCGTTC
TTTTCGAACTTCCGCGCGGGGATAGCGTGGGCGGCGATGGCGGCGCACCG
CAGCCAGTTCGTGTGGTACCGCAGGCTATTCGTCGTGTTCTCGCGCTACG
CGTACGTGAACACCTTCAAGCGCATTCACGTGCCGCCGTCGGCGACACAT
CCGTACAGATGA
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