prot_H-canaliculatus_F_contig10603.589.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10603.589.1
Unique Nameprot_H-canaliculatus_F_contig10603.589.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length314
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10603.589.1 vs. uniprot
Match: D7FUR7_ECTSI (SET and MYND domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR7_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.330e-43
Identity = 142/280 (50.71%), Postives = 168/280 (60.00%), Query Frame = 0 
Query:   33 RGRCADCGGRTREAYFERWTNLLQERLAAADGDMTSGRVRRGRRRLAGVQALCERRLAPHHAFSLGVHCRLSLAAAVDRDWAATISHAERALGDMQALRAGVGGGAVPGANGXXXXXXXXXXXXXXXXXSSDHSPGENREGGADGGGNYRAEVGTGGGRSXXXXXXXXXXXXXCDRGGAANTSAGRCERKRGRDGGRSRXXXXXXXXXXXXXXSSAGMSPGVSIHATAMWEAILVEALDRALPLSGRGHERETELHRSRMRSAQRAIAILGLDRRSLVAL 312
            R RC DCGG T EAYF+RWT LL+ +  AAD D+  GRVR GRR+LA +Q LCERRL+PH++FSLGVHCRLSLAAAVDRDW  TI+HAERALG M+ + + + GG              XXXXXX    + D       EGG           G  GGR   XXXXXXXXXXX                            XXXXXXXXXX  ++A +S    + ATA+WEAILVE LDR LPL+GR    ETELHR+R+  A+R + +LGL R SLV L
Sbjct:  402 RCRCVDCGGVTGEAYFDRWTELLRAKQTAADDDLAGGRVREGRRKLADLQVLCERRLSPHNSFSLGVHCRLSLAAAVDRDWPTTIAHAERALGCMRRIASEIEGGXXX-----------XXXXXXLSAGAIDRGTCVGEEGGD----------GIRGGRGSDXXXXXXXXXXXXX--------------------------XXXXXXXXXXSFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGR--HCETELHRARVAFAERVVGVLGLRRSSLVTL 632
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BLAST of mRNA_H-canaliculatus_F_contig10603.589.1 vs. uniprot
Match: A0A6H5KQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ9_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-10
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:  246 SSAGMSPGVSIHATAMWEAILVEALDRALPLSGRGHERETELHRSRMRSAQRAIAILGLDRRSLVAL 312
            ++A +S    + AT +WEAILVE LDR LPL+GR  E ETE HR+R+  A+R + +LGL R SLV L
Sbjct:   56 TTAMVSSECPLLATGIWEAILVEVLDRVLPLAGRHCETETEAHRARVAFAERVVGVLGLRRSSLVTL 122
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10603.589.1 vs. uniprot
Match: A0A6H5JQS4_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS4_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.740e-10
Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:   33 RGRCADCGGRTREAYFERWTNLLQERLAAADGDMTSGRVRRGRRRLAGVQ 82
            R RC DCGG T EAYF+RWT LL+ + AAAD D+  GRVR GRR+LA +Q
Sbjct:  208 RCRCVDCGGVTEEAYFDRWTELLRAKQAAADDDLAGGRVREGRRKLADLQ 257
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10603.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUR7_ECTSI4.330e-4350.71SET and MYND domain containing 3 n=1 Tax=Ectocarpu... [more]
A0A6H5KQZ9_9PHAE1.800e-1053.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQS4_9PHAE3.740e-1064.00SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10603contigH-canaliculatus_F_contig10603:2563..4524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10603.589.1mRNA_H-canaliculatus_F_contig10603.589.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10603 2065..4729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10603.589.1 ID=prot_H-canaliculatus_F_contig10603.589.1|Name=mRNA_H-canaliculatus_F_contig10603.589.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=314bp
MDGGEGQGEEDEEGKETGSPGGEGGNEGCVSWRGRCADCGGRTREAYFER
WTNLLQERLAAADGDMTSGRVRRGRRRLAGVQALCERRLAPHHAFSLGVH
CRLSLAAAVDRDWAATISHAERALGDMQALRAGVGGGAVPGANGGGCGGG
GGGGGGQGEGRSSDHSPGENREGGADGGGNYRAEVGTGGGRSGAGGGGGG
GGGGGCDRGGAANTSAGRCERKRGRDGGRSRGGRSGEGASGRGGGSSAGM
SPGVSIHATAMWEAILVEALDRALPLSGRGHERETELHRSRMRSAQRAIA
ILGLDRRSLVALG*
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