prot_H-canaliculatus_F_contig10598.576.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10598.576.1
Unique Nameprot_H-canaliculatus_F_contig10598.576.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length208
Homology
BLAST of mRNA_H-canaliculatus_F_contig10598.576.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.310e-58
Identity = 111/208 (53.37%), Postives = 145/208 (69.71%), Query Frame = 0
Query:    1 VLELPTDTPTALDQVQAAYDVLDSSIDECENGYLLSIVFDWFDLNTLTEGVQSEIGSFNEDSLSELASDVHGVSDAVNDTEGVGKGVVWPTLVLALLFTAIFVAIGVATYECVGFGHTTCDAAACFISLSTVLVAVVNRLCAASAVALGVFYNAHAPALTGDFCINSDGNANSLIGDNSDGDDQLTQLITYYATDRSTENQAVDATIS 208
            +L L  DT  ALDQV A+Y+ L  S+D C+NG +LS + D FD+N+LT  VQ+EI   +ED+  ELA DV  +SDAV+DTEG  KG++WP L+L+L+FTA FVA+ V+TYECV FG+  C  A+C I+  T+ VAVV  +CAA AV+L         ALTGDFCI+ D NAN LI DN+DG  ++  LITYY  D ++EN AVDA I+
Sbjct:  153 ILNLANDTSVALDQVTASYEALQESVDGCDNGAILSSLLDAFDINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLS--------ALTGDFCIDPDANANELITDNTDG--EIADLITYYTGDCTSENAAVDAIIT 350          
BLAST of mRNA_H-canaliculatus_F_contig10598.576.1 vs. uniprot
Match: D7FQM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM7_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.520e-18
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 0
Query:    1 VLELPTDTPTALDQVQAAYDVLDSSIDECENGYLLSIVFDWFDLNTLTEGVQSEIGSFNEDSLSELASDVHGVSDAVNDTEGVGKGVVWPTLVLALLFTAIFVAIGVATYECVGFGHTTCDAAACFISLS--TVLVAVVNRLCAASAVAL 148
            ++ LP DT   L  V  +YDVL++S+ +CEN  +   +    D  +L   VQ+ I   +  SL+++A  V  +SDA+  T+ + + +VWPT++LAL+F A+F+ I   TYE V     +C A  C    +   V +AVV  LCAAS ++L
Sbjct:  101 IIGLPADTAVGLGLVSDSYDVLEASVGDCENPDIAQAIVAGLDFGSLASEVQTAIDEIDRTSLADIAKQVQDISDAMYTTKVLRRTIVWPTIILALVFVALFILISCTTYEAVACARPSCRAP-CTGGFAPFVVFLAVVVYLCAASVISL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10598.576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE1.310e-5853.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQM7_ECTSI4.520e-1836.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..208
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10598contigH-canaliculatus_F_contig10598:2513..4161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10598.576.1mRNA_H-canaliculatus_F_contig10598.576.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10598 2513..4163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10598.576.1 ID=prot_H-canaliculatus_F_contig10598.576.1|Name=mRNA_H-canaliculatus_F_contig10598.576.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=208bp
VLELPTDTPTALDQVQAAYDVLDSSIDECENGYLLSIVFDWFDLNTLTEG
VQSEIGSFNEDSLSELASDVHGVSDAVNDTEGVGKGVVWPTLVLALLFTA
IFVAIGVATYECVGFGHTTCDAAACFISLSTVLVAVVNRLCAASAVALGV
FYNAHAPALTGDFCINSDGNANSLIGDNSDGDDQLTQLITYYATDRSTEN
QAVDATIS
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