prot_H-canaliculatus_F_contig10579.562.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10579.562.1
Unique Nameprot_H-canaliculatus_F_contig10579.562.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length885
Homology
BLAST of mRNA_H-canaliculatus_F_contig10579.562.1 vs. uniprot
Match: D8LHM9_ECTSI (T-complex 11 (Mouse) like 2, isoform CRA_a (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM9_ECTSI)

HSP 1 Score: 826 bits (2134), Expect = 6.750e-286
Identity = 604/816 (74.02%), Postives = 627/816 (76.84%), Query Frame = 0
Query:   62 IHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDNLRRERRRRAMERYEEGKARVLDQQGAVGFPSSSSASGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITKSTYVEAGRDNRRRQATEARQAAKARRTQRMRSLRQRMLSHSSRVSELKTRVFAASLLQEWWRCVRAGKSFDVADLAIP-----SPDGTPLQRSPLGSPAAWATARGLGLSVPDVGFGSMVHASGGYARSQAAAXXXXXXXGSRPLSPPVLDPCTRSPIPTSGRFSPGVGGSKKALGVIGSGAAAA---------AGGGERXXXXXXXXX-----AMNVTAMGYGFLSHHKAALTIQAFLRRNMHPLKVANALLAGRLSVKVLCAAVRTMSTSTFDEAIDLMSTRAIVSHCETALKALRMGREMRSVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSAEGTAPLKVEKDRLVRAAGNAIQALLDLETTIDAAAAAAGGEATRGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTAAASEKFGAEYFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDEADDGGALFSTGFEQIKEGTQKQLGKMMHALGKLVGADEARQRMDEATDAAFERLRVDELAEDEAFLAEHGAGFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGASAXXXXXXXXXXXXXXXXXXXXXAMSEEEEDIAGPRRPLSAGDLLSNEWLVHEVRV 858
            +HNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRD LRRERRRRAMERYEEGKARVL+Q GA    +SSSA  G                                        TKST  E GRDNRRR+A EA         QRMRSLRQRMLSH+SRVSE KTR+FAA LLQ WWRCVR GKSFDV  LA+      SPD TP QRSPLGSP +WATA+GLGLSVPDVG GS+V   G Y R+QA+A       G   LSPPVLDPCTRSPIPTSGRFSPGVGGSKK LG  G+  A           AGGG  XXXXXXXXX     AMNVT MGYGF SHHKAAL IQAFLRRNMHPLKVANALLAGRLS+KVLCAAVRTMSTSTFDEAID+MSTRAIVSHCETALKALRMGREMR VPQTVRSARAFLSALLVNFFPTSALDDEGALSSS EGTAPLKVEKDRLVRAAGNAIQALL LETT+DAA                    XXXXXXXXXXXXXXXXXXXXX    AA   F AE+FPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGID+ADD GALFSTGFEQIKEGTQ+QLGKMMHALGKLVGADEARQRM++ATDAAFERLR DELAEDEAFLAEHGA F DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               AMSEEE+DIAGPRRPLS GDLLS EWLV  V +
Sbjct:    1 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQ-GAFASSASSSAFVGGVGGVRSGCLRAGPGSGGGGGITN----------------TKSTNGELGRDNRRRRAAEAXXXXXXXXXQRMRSLRQRMLSHTSRVSERKTRLFAARLLQAWWRCVREGKSFDVTGLALSISSSSSPDATPQQRSPLGSPTSWATAQGLGLSVPDVGCGSVVP-FGDYMRNQASAASG----GGPALSPPVLDPCTRSPIPTSGRFSPGVGGSKKVLGTAGAAVAPTIGRGCARETAGGGXXXXXXXXXXXXXXVSAMNVTTMGYGFGSHHKAALAIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSPEGTAPLKVEKDRLVRAAGNAIQALLGLETTMDAA--------------------XXXXXXXXXXXXXXXXXXXXXXXXTAAMATFSAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMMHALGKLVGADEARQRMNDATDAAFERLRADELAEDEAFLAEHGAAFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM---------------------------AMSEEEDDIAGPRRPLSGGDLLSKEWLVPGVMI 747          
BLAST of mRNA_H-canaliculatus_F_contig10579.562.1 vs. uniprot
Match: A0A6H5K7E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E8_9PHAE)

HSP 1 Score: 834 bits (2155), Expect = 1.440e-284
Identity = 600/817 (73.44%), Postives = 627/817 (76.74%), Query Frame = 0
Query:   62 IHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDNLRRERRRRAMERYEEGKARVLDQQGAVGFPSSSSASGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITKSTYVEAGRDNRRRQATEARQAAKARRTQRMRSLRQRMLSHSSRVSELKTRVFAASLLQEWWRCVRAGKSFDVADLAIP------SPDGTPLQRSPLGSPAAWATARGLGLSVPDVGFGSMVHASGGYARSQAAAXXXXXXXGSRPLSPPVLDPCTRSPIPTSGRFSPGVGGSKKA--------LGVIGSGAAAAAGGGERXXXXXXXXX------AMNVTAMGYGFLSHHKAALTIQAFLRRNMHPLKVANALLAGRLSVKVLCAAVRTMSTSTFDEAIDLMSTRAIVSHCETALKALRMGREMRSVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSAEGTAPLKVEKDRLVRAAGNAIQALLDLETTIDAAAAAAGGEATRGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTAAASEKFGAEYFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDLHVAAVRYGIDEADDGGALFSTGFEQIKEGTQKQLGKMMHALGKLVGADEARQRMDEATDAAFERLRVDELAEDEAFLAEHGAGFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGASAXXXXXXXXXXXXXXXXXXXXXAMSEEEEDIAGPRRPLSAGDLLSNEWLVHEVRV 858
            +HNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRD LRRERRRRAMERYEEGKARVL+Q G + F +SSSA  G                                        TKST  E GRDNRRR+A EAR        QRMRSLRQRMLSH+S+VSE KTR+FAA LLQ WWRCVR GKSFDVA LAI       SPD TP QRSPLGSP +WATA+GLGLSVPDVG GS+V   G Y R+ A+A       G   LSPPVLDPCTRSPIPTSGRF PGVGGSKKA           IG G A    GG  XXXXXXXXX      AMNVT MGYGF SHHKAAL+IQAFLRRNMHPLKVANALLAGRLS+KVLCAAVRTMSTSTFDEAID+MSTRAIVSHCETALKALRMGREMR VPQTVRSARAFLSALLVNFFPTSALDDEGALSSS EGTAPLKVEKDRLVRAAGNAIQALL LETT+DAA                         XXXXXXXXXXXXXXX    A A+  FGAE+FPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRA+RDLHVAAVRYGID+ADD GALFSTGFEQIKEGTQ+QLGKM+HALGKLVGADEARQRM++ATDAAFERLR DELAEDEAFLAEHGA F DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        G S                      AMSEEE+DIAGPRRPLSAGDLLSNEWLVHEV +
Sbjct:    1 MHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAERNRDKLRRERRRRAMERYEEGKARVLEQ-GGLAFSTSSSAFRGGVGGVRSGCLRAAPGSGVGGGITN----------------TKSTNGELGRDNRRRRAAEARXXXXXXXXQRMRSLRQRMLSHTSQVSERKTRLFAARLLQAWWRCVREGKSFDVAGLAISISSSSSSPDVTPPQRSPLGSPTSWATAQGLGLSVPDVGCGSVVP-FGDYMRNHASAASG----GGPALSPPVLDPCTRSPIPTSGRFCPGVGGSKKASEATDAAVAPAIGRGGARETAGGXXXXXXXXXXXXXXXFSAMNVTTMGYGFGSHHKAALSIQAFLRRNMHPLKVANALLAGRLSIKVLCAAVRTMSTSTFDEAIDVMSTRAIVSHCETALKALRMGREMRCVPQTVRSARAFLSALLVNFFPTSALDDEGALSSSPEGTAPLKVEKDRLVRAAGNAIQALLGLETTMDAA-------------------------XXXXXXXXXXXXXXXTEKAATATATFGAEHFPKIRRASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAQRDLHVAAVRYGIDDADDEGALFSTGFEQIKEGTQRQLGKMLHALGKLVGADEARQRMNDATDAAFERLRADELAEDEAFLAEHGAAFADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GKSGSM-------------------AMSEEEDDIAGPRRPLSAGDLLSNEWLVHEVMI 743          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10579.562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHM9_ECTSI6.750e-28674.02T-complex 11 (Mouse) like 2, isoform CRA_a (Partia... [more]
A0A6H5K7E8_9PHAE1.440e-28473.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableCOILSCoilCoilcoord: 89..116
NoneNo IPR availablePANTHERPTHR23261GROUNDHOG-RELATEDcoord: 550..883
coord: 128..212
NoneNo IPR availablePANTHERPTHR23261:SF22GROUND-LIKE (GRD RELATED)coord: 550..883
coord: 128..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10579contigH-canaliculatus_F_contig10579:208..4302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10579.562.1mRNA_H-canaliculatus_F_contig10579.562.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10579 208..4302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10579.562.1 ID=prot_H-canaliculatus_F_contig10579.562.1|Name=mRNA_H-canaliculatus_F_contig10579.562.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=885bp
LRKIGEAREAVDARFAENAAQLMERQVEKQTSATRRQASPFSPPSHRVRR
TSLENIKKARAIHNRRVNQRRRESFDDASGVSPARIKGMHEFESKLARAE
RNRDNLRRERRRRAMERYEEGKARVLDQQGAVGFPSSSSASGGRGGGRGG
VGGIRAGLVRGVSGGGGGAGAGAGAGGGSGGGITKSTYVEAGRDNRRRQA
TEARQAAKARRTQRMRSLRQRMLSHSSRVSELKTRVFAASLLQEWWRCVR
AGKSFDVADLAIPSPDGTPLQRSPLGSPAAWATARGLGLSVPDVGFGSMV
HASGGYARSQAAAGAGAGAGGSRPLSPPVLDPCTRSPIPTSGRFSPGVGG
SKKALGVIGSGAAAAAGGGERGGGDAGGVSAMNVTAMGYGFLSHHKAALT
IQAFLRRNMHPLKVANALLAGRLSVKVLCAAVRTMSTSTFDEAIDLMSTR
AIVSHCETALKALRMGREMRSVPQTVRSARAFLSALLVNFFPTSALDDEG
ALSSSAEGTAPLKVEKDRLVRAAGNAIQALLDLETTIDAAAAAAGGEATR
GAAGGAGAGAGASAGGNGTEVEKAAAAAAAAPTTAAASEKFGAEYFPKIR
RASATMVRARVAFCRRFAEWKRKDAVRLADEMTAASVDVLFMQLRAERDL
HVAAVRYGIDEADDGGALFSTGFEQIKEGTQKQLGKMMHALGKLVGADEA
RQRMDEATDAAFERLRVDELAEDEAFLAEHGAGFGDDDEEDDDDDDDEDE
DDEDGNHSMDTDDSGSDGYGGRGGGRRQATGAAANAAASAAGAGAGAGEV
GASAGGGSAASDAAAALLGKGRSSAAMSEEEEDIAGPRRPLSAGDLLSNE
WLVHEVRVVVGRALAPTGEVSRSGEGGREGGGGGD
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