prot_H-canaliculatus_M_contigs9768.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: D8LMI4_ECTSI (RpoD family RNA polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI4_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.080e-56 Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 0 Query: 1 HLPPKNRQDLAASLDISERQVAKLLRWANDCRSIDRVLVPGGATLGDIIPGSQSTEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQEDRQLRFY 135 H P+ QDLA SL ISERQ+AKLLR A DC+S++RVLV G LG++IPG+QS E +LRRLDAEASLV LL LKPQEE+VIVHRYGLFGR +KSTPAVAAVMGVSRQYVGRVH+ AL KMRAS + D+Q RF+ Sbjct: 82 HCGPQTSQDLATSLGISERQLAKLLRRAKDCQSMNRVLVSSGVALGEMIPGAQSCEDILRRLDAEASLVGLLGTLKPQEEEVIVHRYGLFGRRRKSTPAVAAVMGVSRQYVGRVHRSALEKMRASFEADQQPRFH 216
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A6H5K7U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 7.990e-54 Identity = 96/135 (71.11%), Postives = 113/135 (83.70%), Query Frame = 0 Query: 1 HLPPKNRQDLAASLDISERQVAKLLRWANDCRSIDRVLVPGGATLGDIIPGSQSTEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQEDRQLRFY 135 H P+ QDLA SLD+SERQ+AKLLR A DC+S+++VLV G TLG++IPG+QS E +LRRLDAEASLV LL LKPQE +VIVHRYGLFGR +KSTPAVAAVMGVSRQYVGRVH+ AL KMRAS + D+Q RF+ Sbjct: 331 HCGPQTSQDLATSLDMSERQLAKLLRRAKDCQSMNKVLVSSGVTLGEMIPGAQSCENILRRLDAEASLVGLLGTLKPQEVEVIVHRYGLFGRRRKSTPAVAAVMGVSRQYVGRVHRSALEKMRASFEADQQPRFH 465
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A1G1E3Q1_9BACT (RNA_pol_sigma70 domain-containing protein n=1 Tax=Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 TaxID=1801687 RepID=A0A1G1E3Q1_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 7.770e-9 Identity = 34/122 (27.87%), Postives = 69/122 (56.56%), Query Frame = 0 Query: 9 DLAASLDISERQVAKLLRWANDCRSIDRVLVPGGATLGDIIPGSQ--STEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQE 128 ++A +D++ +V LLR + + S++ + + LGD + + S + RLD + ++L L P+EEQV+ R+G+ G + + + +MGVSR+ + ++ Q+AL K++ L++ Sbjct: 361 EVAKGIDLTPEEVRDLLRMSKNPLSLETPVGNEDSCLGDFVRDKKIDSPAETIIRLDLSRQVKKVLSTLTPREEQVVKMRFGIAGTTEHTLQEIGNIMGVSRERIRQIEQLALKKLKNPLRK 482
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A359B8L7_9FIRM (RNA polymerase subunit sigma n=1 Tax=Desulfotomaculum sp. TaxID=41211 RepID=A0A359B8L7_9FIRM) HSP 1 Score: 57.0 bits (136), Expect = 3.730e-8 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 56 EAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKM 122 E V + LD E L R L+HL PQE V+V RYGL G+ +++ +A MG+SR YV R+ + A++++ Sbjct: 13 ELVAKNLDCE-QLWRKLKHLTPQERNVLVLRYGLRGKKRRTQKEIAKNMGISRSYVSRIEKRAIDRL 78
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: UPI0013571084 (RNA polymerase sigma factor RpoS n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=UPI0013571084) HSP 1 Score: 58.9 bits (141), Expect = 1.480e-7 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 0 Query: 8 QDLAASLDISERQVAKLLRWANDCRSIDRVLVPGGAT-LGDIIPGSQST--EAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQE 128 +D+A LD+S ++V+K+L+ S+D L T L DIIP S + E L+ + + +V LE L P++ +V+ R+GL G + V +G++R+ V ++ AL +R L E Sbjct: 198 EDIAKELDVSAKEVSKILKLNERISSVDTPLGQSSNTELLDIIPDSNESTPENTLQTNNMKLRIVDWLEDLNPKQREVLARRFGLLGYEADTLENVGKEIGLTRERVRQIQVEALKALREVLSE 321
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A0F2PCZ8_9FIRM (RNA polymerase sigma factor n=1 Tax=Peptococcaceae bacterium BRH_c8a TaxID=1629715 RepID=A0A0F2PCZ8_9FIRM) HSP 1 Score: 57.0 bits (136), Expect = 3.740e-7 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 56 EAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKM 122 E V + LD E L R L+HL PQE V+V RYGL G+ +++ +A MG+SR YV R+ + A++++ Sbjct: 143 ELVAKNLDCE-QLWRKLKHLTPQERNVLVLRYGLRGKKRRTQKEIAKNMGISRSYVSRIEKRAIDRL 208
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: UPI0004050881 (RNA polymerase sigma factor RpoS n=2 Tax=Psychromonas TaxID=67572 RepID=UPI0004050881) HSP 1 Score: 56.2 bits (134), Expect = 1.340e-6 Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 0 Query: 8 QDLAASLDISERQVAKLLRWANDCRSIDRVLVPGGAT----LGDIIPGSQST--EAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQE 128 +D+A LD+S ++VAK+L+ S+D +P G L DIIP + E L+ D + +V LE L P++ +V+ R+GL G + V +G++R+ V ++ AL +R L E Sbjct: 205 EDIAKELDVSAKEVAKILKLNERISSVD---IPIGNNSDKELLDIIPDRKEATPENELQSDDMKLRIVDWLEDLNPKQREVLARRFGLLGYEAATLENVGKEIGLTRERVRQIQVEALKSLRDVLSE 328
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A6J4HR89_9ACTN (RNA polymerase sigma factor n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4HR89_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 1.720e-6 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 0 Query: 9 DLAASLDISERQVAKLLRWANDCRSI-DRVLVPGGATLGDII-------PGSQSTEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMR 123 +LA LDI ERQVA++ R+A+D S+ D + G A LGDI+ P + EA+L A L RLL L +E +++ R+GL ++ V ++R+ + ++ A++K+R Sbjct: 180 ELAVELDIPERQVAEIFRYASDTASLSDPLRDDGDAELGDIVEDRSAVSPFDAAAEALL-----PAELERLLAPLAEREREILRLRFGLDRGEPRTLDEVGESFNLTRERIRQIEARAMSKLR 297
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: UPI001EE98705 (RNA polymerase sigma factor RpoS n=1 Tax=Psychromonas antarctica TaxID=67573 RepID=UPI001EE98705) HSP 1 Score: 55.8 bits (133), Expect = 1.720e-6 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 8 QDLAASLDISERQVAKLLRWANDCRSIDRVLVPGGAT----LGDIIPGSQ--STEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPAVAAVMGVSRQYVGRVHQIALNKMRASLQE 128 +D+A LD+S ++VAK+L+ S+D +P G L DIIP + S E L+ D + +V LE L P++ +V+ R+GL G + V +G++R+ V ++ AL +R L + Sbjct: 177 EDIAKELDVSAKEVAKILKLNERISSVD---IPIGNNSDKELLDIIPDRKEASPENELQDDDMKLRIVDWLEDLNPKQREVLARRFGLLGYEAATLENVGKEIGLTRERVRQIQVEALKSLRDVLSQ 300
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Match: A0A0H3K505_SYNP6 (RNA polymerase sigma factor n=3 Tax=Synechococcus elongatus TaxID=32046 RepID=A0A0H3K505_SYNP6) HSP 1 Score: 55.8 bits (133), Expect = 1.740e-6 Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 0 Query: 6 NRQDLAASLDISERQVAKLLRWANDCRSIDRVLV--PGGATLGDII--PGSQSTEAVLRRLDAEASLVRLLEHLKPQEEQVIVHRYGLFGRGKKSTPA-VAAVMGVSRQYVGRVHQIALNKMR 123 +RQ++A ++ + + +LR + C S+D + G + LG++I P ++ L LEHL PQE QV+ R+GL G G++ T A + +M VSR+ V +V AL K+R Sbjct: 185 SRQEIAEAVQLPLNDLETILRQSRQCTSLDAPVSGEDGKSFLGELIADPNGNEPMDIMENAMQREQLDAWLEHLTPQERQVLYLRFGL-GDGERHTLAEIGRMMEVSRERVRQVEVKALRKLR 306 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9768.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_M_contigs9768.1.1 ID=prot_H-canaliculatus_M_contigs9768.1.1|Name=mRNA_H-canaliculatus_M_contigs9768.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=135bpback to top |