prot_H-canaliculatus_M_contigs9613.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9613.1.1
Unique Nameprot_H-canaliculatus_M_contigs9613.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length270
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9613.1.1 vs. uniprot
Match: D8LH06_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH06_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 2.900e-142
Identity = 203/270 (75.19%), Postives = 234/270 (86.67%), Query Frame = 0
Query:    1 LLSAQYYEDIKSIRHGKLDAPITIKGPRSAVVRGESGMSVVSITHHHVHLEGFSIDGSGLDQANMDDLDPDRYHRSLLHIRGDRGVQMVSYDGHEHRLSGVTGFKGTQLNLSHARCTCIMLSGFVTHAELRDNDVSDCGVTSTGCGAGDXXXXXESGGIGQGLELGTPEAEILAMFEGKVDETAWNAVIGNSFSNVGGACGVLHQGTRFNLLDGNTCMGSRDEDGAGFVLLGDANIFQNNYVTGGSGAGLAVGSSSFDSEGHQYGIFNQV 270
            L    YYEDIKS R G  DAPITIKGPRSAVVRG+ GM+VVSITHHHVHLEGFSIDGSG    +  DLDPD++HR+LLH+ GDR V+M S+ GH+HR SGVTGFKG++LNLS+ARC+C+MLS FVTHAELRDND+SDCG+TSTGC AG XXXXXESG IGQGLE+GTP AE++A F+G VDETAWN V+GNSFS +GGACGV+HQG RFNLLDGNTC GSRD DGAGF+LLGDAN F+NNYVTGGSGAGLAVG +++D E H+YG+FNQV
Sbjct:   39 LAPGMYYEDIKSSRDGTEDAPITIKGPRSAVVRGDGGMNVVSITHHHVHLEGFSIDGSGGKNEDNSDLDPDKFHRNLLHVHGDRRVEMTSFHGHKHR-SGVTGFKGSKLNLSYARCSCVMLSDFVTHAELRDNDISDCGITSTGCRAGGXXXXXESGSIGQGLEVGTPTAEVMAEFDGVVDETAWNKVVGNSFSTIGGACGVVHQGARFNLLDGNTCTGSRDADGAGFILLGDANTFRNNYVTGGSGAGLAVGGTNYDPEVHKYGVFNQV 307          
BLAST of mRNA_H-canaliculatus_M_contigs9613.1.1 vs. uniprot
Match: A0A1F7IR59_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12 TaxID=1802061 RepID=A0A1F7IR59_9BACT)

HSP 1 Score: 114 bits (285), Expect = 1.510e-26
Identity = 81/275 (29.45%), Postives = 130/275 (47.27%), Query Frame = 0
Query:    2 LSAQYYEDIKSIRHGKLDAPITIKGPRSAVVRGESGMSVVSITHHHVHLEGFSIDGSGLDQANMDDLDPDRYHRSLLHIRGDRGVQMVSYDGHEHRLSGVTGFKGTQLNLSHARCTCIMLSGFVTHAELRDNDVSDCGVTSTGCGAGDXXXXXESGGIGQGLELGT-PEAEILAMFEGKV-----DETAWNAVIGNSFSNVGGACGVLHQGTRFNLLDGNTCMGSRDEDGAGFVLLGDANIFQNNYVTGGSGAGLAVGSSSFDSEGHQYGIFNQV 270
            +S  Y +D  + R G L +PITI GPR A+V+GES   V+ I H ++ L+GF+IDG      + DD   D Y   L++ +G            + +  GV G K   + + +A   C+ L  +  + E+  N ++ CG               + G  G+G+ +GT PE       +GK      DE+  N +  N F   G  C  + + +++N+++ N C G +D +  G    G  NIF+ N + G SGAG+ +G  + D       I N+V
Sbjct:    1 MSGVYRQDFVTKRDGTLVSPITITGPRDALVKGESNGRVIEINHDNIILDGFTIDG-----LHGDDNLQDGYRDKLIYAQG------------KGQHDGVNGLKILNMTIKNAGGECVRLRYYAQNNEIAYNTITSCGRHD--------YKFDDGGKNGEGVYIGTAPEQRD----DGKNPTNDNDESNGNWIHHNFFDTQGNECVDIKENSKYNIVENNECTGQKDPESGGLDSRGGYNIFRYNNIYGNSGAGIRLGGDTVDEN-----IMNEV 241          
BLAST of mRNA_H-canaliculatus_M_contigs9613.1.1 vs. uniprot
Match: A0A1F6KJI5_9BACT (Beta_helix domain-containing protein n=1 Tax=Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_39_17 TaxID=1798636 RepID=A0A1F6KJI5_9BACT)

HSP 1 Score: 100 bits (248), Expect = 4.270e-21
Identity = 73/253 (28.85%), Postives = 116/253 (45.85%), Query Frame = 0
Query:    6 YYEDIKSIRHGKLDAPITIKGPRSAVVRGESGMSVVSITHHHVHLEGFSIDGSGLDQANMDDLDPDRYHRSLLHIRGDRGVQMVSYDGHEHRLSGVTGFKGTQLNLSHARCTCIMLSGFVTHAELRDNDVSDCGVTSTGCGAGDXXXXXESGGIGQGLELGTPEAEILAMFEGK-----VDETAWNAVIGNSFSNVGGACGVLHQGTRFNLLDGNTCMGSRDEDGAGFVLLGDANIFQNNYVTGGSGAGLAVG 253
            Y ++  S R G+   PITI GP+ AVV+G +   V  I H ++ L GF++DG   D +N        Y   LL+I G            +    G+TG +   + + +A   CI L   V  +E+  N + +CG+     G G        G  G+G+ +GT   ++    +GK      DE+  N +  N F   G  C  + +    N+++ N C G +D +  GF   G+ NIF+ N +    GAG+ +G
Sbjct:   21 YLQNFVSKRSGESGFPITITGPKEAVVKGGANARVAEINHSYITLSGFTLDGK-FDSSNS----ASGYRDKLLYILG------------KEPKVGITGTRIFNMAIRNAGGECIRLRYLVKFSEIAYNTIENCGIHDFVFGDG--------GKNGEGVYIGTAPEQLK---DGKNPTSDPDESNNNWIHHNFFDTQGNECVDIKEAAAKNIIENNRCTGQKDSNSGGFDSRGENNIFRLNEIFDNKGAGVRLG 245          
BLAST of mRNA_H-canaliculatus_M_contigs9613.1.1 vs. uniprot
Match: K2BA84_9BACT (Beta_helix domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=K2BA84_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 1.900e-20
Identity = 72/253 (28.46%), Postives = 116/253 (45.85%), Query Frame = 0
Query:    6 YYEDIKSIRHGKLDAPITIKGPRSAVVRGESGMSVVSITHHHVHLEGFSIDGSGLDQANMDDLDPDRYHRSLLHIRGDRGVQMVSYDGHEHRLSGVTGFKGTQLNLSHARCTCIMLSGFVTHAELRDNDVSDCGVTSTGCGAGDXXXXXESGGIGQGLELGTPEAEILAMFEGK-----VDETAWNAVIGNSFSNVGGACGVLHQGTRFNLLDGNTCMGSRDEDGAGFVLLGDANIFQNNYVTGGSGAGLAVG 253
            Y ++  S R G+   PITI GP+ AVV+G +   V  I H ++ L GF++DG   D +N        Y   LL+I G            +    G+TG +   + + +A   C+ L   V  +E+  N + +CG+     G G        G  G+G+ +GT   ++    +GK      DE+  N +  N F   G  C  + +    N+++ N C G +D +  GF   G+ NIF+ N +    GAG+ +G
Sbjct:  112 YLQNFVSKRSGESGFPITITGPKEAVVKGGANARVAEINHSYITLSGFTLDGK-FDSSNS----ASGYRDKLLYILG------------KEPKVGITGTRIFNMAIRNAGGECVRLRYLVKFSEIAYNTIENCGIHDFVFGDG--------GKNGEGVYIGTAPEQLK---DGKNPTSDPDESNNNWIHHNFFDTQGNECVDIKEAAAKNIIENNRCTGQKDSNSGGFDSRGENNIFRLNEIFDNKGAGVRLG 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9613.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH06_ECTSI2.900e-14275.19EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A1F7IR59_9BACT1.510e-2629.45Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A1F6KJI5_9BACT4.270e-2128.85Beta_helix domain-containing protein n=1 Tax=Candi... [more]
K2BA84_9BACT1.900e-2028.46Beta_helix domain-containing protein n=3 Tax=Bacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 3..269
e-value: 1.7E-10
score: 42.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 6..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9613contigH-canaliculatus_M_contigs9613:68..4172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9613.1.1mRNA_H-canaliculatus_M_contigs9613.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9613 68..4172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9613.1.1 ID=prot_H-canaliculatus_M_contigs9613.1.1|Name=mRNA_H-canaliculatus_M_contigs9613.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=270bp
LLSAQYYEDIKSIRHGKLDAPITIKGPRSAVVRGESGMSVVSITHHHVHL
EGFSIDGSGLDQANMDDLDPDRYHRSLLHIRGDRGVQMVSYDGHEHRLSG
VTGFKGTQLNLSHARCTCIMLSGFVTHAELRDNDVSDCGVTSTGCGAGDG
GGGGESGGIGQGLELGTPEAEILAMFEGKVDETAWNAVIGNSFSNVGGAC
GVLHQGTRFNLLDGNTCMGSRDEDGAGFVLLGDANIFQNNYVTGGSGAGL
AVGSSSFDSEGHQYGIFNQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold