prot_H-canaliculatus_M_contigs9598.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9598.1.1
Unique Nameprot_H-canaliculatus_M_contigs9598.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length578
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9598.1.1 vs. uniprot
Match: A0A6H5KG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG38_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.550e-48
Identity = 257/575 (44.70%), Postives = 304/575 (52.87%), Query Frame = 0 
Query:    1 MESLGIVPGLPYYHWAI---KGAANTSGXXXXXXXXXXXXXXXXAEAVPAHGWGAMRDIAAEMSEKGVVPNQNSYRLVEQMKPRLPADGT-----GGSGAE------------EAERVLALLRGIEGAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSSGKGGAGNVLGSVQACNKTLRKLSTKGNGTKAIALIASMRKAGVALTDRSYTSAMNACRRGGQWREVLALLKSACSDPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMESRGISASTDLYNWAIKAASSRDMGGPARSILAREGGWRSPDQDGSDAGDPSSESTGAGXXXXXXXXXXXXXXXXXGSEAATGLLRHMLDSGVPPNPITYTLVLSACRRDGEPERALAVLRGMQEVVAAVAAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGAGPPNAIHYASVMAAFAEYPGGWKNNLALMKEMEEAGIAPNVYAYNATISACGWEG 555
            M SLGI PGL YYH A+   KGA N                       P  GW  M+++ +EMSEK VVPNQN+YRLV++++  L + G+     GG G +            EAER++++LRGI+GAP P                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 + G+   LGS+QACN+ LR+ + +G G  A  LI  MRK GV  T +SYTSA+NAC+ GG                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    A+S   G   R+ + R GGWR        AG+   +   +                    EAA  LLR M + GV P+ ITYTLV++ACR DG+PERALAVLR MQ++ +   A                                          XXXXXXXXXXXXXXXXXXXXXXXXX       G   PN IHY+SVM+AFA++PGGWK  L LMKEME AGI PN Y YN+ I ACG EG
Sbjct:  293 MASLGIAPGLSYYHGAMAAAKGAEN-----------------------PTQGWETMKELVSEMSEKRVVPNQNTYRLVDEVRSGLGSSGSAEVNKGGIGVDGSKDDASNGRDVEAERLVSMLRGIDGAPPPATAKTEGREQAKRRPKTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----------------EAGSPPALGSLQACNRDLRRYANRGAGEAAAELIGRMRKGGVQPTAKSYTSAINACKNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AASPKTGSEVRASMTRGGGWR--------AGEQQVDDVNSSSGGDDDGVNGLKPAAPSAGEAAAALLREMSEKGVAPDSITYTLVITACREDGKPERALAVLREMQKLASEAEAEADVQPVAETVEEEAGVGEEGGDREVGKGSNHAGANDSGAPGXXXXXXXXXXXXXXXXXXXXXXXXX-------GVVVPNVIHYSSVMSAFADHPGGWKYVLRLMKEMEVAGINPNAYTYNSAIRACGKEG 811
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9598.1.1 vs. uniprot
Match: D8LFU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU5_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 3.110e-45
Identity = 254/550 (46.18%), Postives = 298/550 (54.18%), Query Frame = 0 
Query:    1 MESLGIVPGLPYYHWAIKGAANTSGXXXXXXXXXXXXXXXXAEAVPAHGWGAMRDIAAEMSEKGVVPNQNSYRLVEQMKPRLPA-----------------DGTGGSGAEEAERVLALLRGIEGAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSSGKGGAGNVLGSVQACNKTLRKLSTKGNGTKAIALIASMRKAGVALTDRSYTSAMNACRRGGQWREVLALLKSACSDPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMESRGISASTDLYNWAIKAASSRDMGGPARSILAREGGWRSPDQDGSDAGDPSSESTGAGXXXXXXXXXXXXXXXXXGSEAATGLLRHMLDSGVPPNPITYTLVLSACRRDGEPERALAVLRGMQEVVAAVAAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMGAGPPNAIHYASVMAAFAEYPGGWKNNLALMKEME 533
            M SLGI PGL YYH A+  A                          A GW  ++++ +EMSEK VVP+QN+YRLV++++  L +                 DG    G  EAER++++LRGI+GAP P                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            PRS  + G+   LGS+QACN+ LR+ + +G G  A  LI  MRK GV  T +SYTSA+NAC+ GGQW   LALL+ A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      S   GG  R+ + R GGWR+ +Q   DA   SS    AG   XXXXXXXXXXXXXX   AA  LLR M + GV P+ ITYTLV++ACR DGEPERALAVLR MQ++     A E                                                        XXXXXXXXXXXXX       PN IHY+SVM+AFA++PGGWK+ L LMKEME
Sbjct:  382 MASLGISPGLSYYHGAMAAAKGA-----------------------AQGWKTVKELVSEMSEKRVVPSQNTYRLVDEVRSGLGSSSSAEVNNGGIGVDGSKDGASDGGDVEAERLVSMLRGIDGAPPPATTKTEGRERAKRRPKTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-----------PRSKREAGSRPALGSLQACNRDLRRYADRGAGDAAAELIGRMRKDGVQPTAKSYTSAINACKNGGQWERALALLREA--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPKTGGEIRASMTRGGGWRAVEQHVDDAKSNSS----AGGGDXXXXXXXXXXXXXXXXXAAAALLREMSEKGVAPDSITYTLVMTACRVDGEPERALAVLREMQKL-----ASETEAEADVGPVAETVQEEAGVGGEGGDREVGKGSSHDGANDSGASGSPAVPSPHPPRXXXXXXXXXXXXXXXXXVVVPNVIHYSSVMSAFADHPGGWKHVLRLMKEME 886
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9598.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG38_9PHAE1.550e-4844.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFU5_ECTSI3.110e-4546.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..164
NoneNo IPR availableCOILSCoilCoilcoord: 418..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..501
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 372..446
coord: 496..577
coord: 193..325
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 542..576
e-value: 3.6E-6
score: 24.8
coord: 390..417
e-value: 9.2E-4
score: 17.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 231..253
e-value: 0.32
score: 11.3
coord: 390..417
e-value: 0.0046
score: 17.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 539..577
e-value: 6.3E-9
score: 35.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 540..574
score: 12.824779
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..539
score: 8.747175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..418
score: 8.747175
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 367..491
e-value: 1.4E-11
score: 46.4
coord: 192..333
e-value: 1.1E-14
score: 56.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 493..578
e-value: 5.2E-17
score: 63.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9598contigH-canaliculatus_M_contigs9598:349..4526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9598.1.1mRNA_H-canaliculatus_M_contigs9598.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9598 349..4550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9598.1.1 ID=prot_H-canaliculatus_M_contigs9598.1.1|Name=mRNA_H-canaliculatus_M_contigs9598.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=578bp
MESLGIVPGLPYYHWAIKGAANTSGGRRRGGGADGDAAAAAAEAVPAHGW
GAMRDIAAEMSEKGVVPNQNSYRLVEQMKPRLPADGTGGSGAEEAERVLA
LLRGIEGAPEPAPLPPPPPPPPRMARATKAGEEAAGAAASTETAESSEEE
AKKARDTKTKAKAKSRGSSSSSSASSSSPRSSGKGGAGNVLGSVQACNKT
LRKLSTKGNGTKAIALIASMRKAGVALTDRSYTSAMNACRRGGQWREVLA
LLKSACSDPGVTVNEFHFAAAVKTCANGQQWDRQIPALLADMESRGISAS
TDLYNWAIKAASSRDMGGPARSILAREGGWRSPDQDGSDAGDPSSESTGA
GSDAGAESRGRSGAPPSCGSEAATGLLRHMLDSGVPPNPITYTLVLSACR
RDGEPERALAVLRGMQEVVAAVAAREKEEEEEEEQEKEREERHQHGHGQE
KEAVVEEEEGGASAAEGEGDDGSDGGAAADASSASSPQPWRRRRERRMGA
GPPNAIHYASVMAAFAEYPGGWKNNLALMKEMEEAGIAPNVYAYNATISA
CGWEGRWAEAVAVFRRMRKKGVAPDEVS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat