prot_H-canaliculatus_M_contigs9573.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9573.1.1
Unique Nameprot_H-canaliculatus_M_contigs9573.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length259
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A6H5J6X8_9PHAE (NGN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X8_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 5.180e-131
Identity = 177/212 (83.49%), Postives = 200/212 (94.34%), Query Frame = 0
Query:    4 QVPTDDEFHWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKVQDGEYMVKVNTFGRNSDVRLDWGGVRKLSELEVETWFEDTRRAMDATYMERASGRG 215
            +VPTD+EFHWYLLRCFATYE+RCRN+VE++LEGAGLGDR+ EIWVPCRQVPKQVGKKVTFKEEPIYQGY+YC +KM+ +VRD+VNDMDRIVGFVGE RDEDK+LIP RMDP DIEGI+ SE+ALG NKIP LLGVGDLVE+SEGPFA+K GE+SK++DGEY+VKVNTFGRNSDVRLDW GVRKL+ELEVETWFE+TRRAMDATYMER SGRG
Sbjct:  190 KVPTDEEFHWYLLRCFATYEMRCRNSVEAYLEGAGLGDRVEEIWVPCRQVPKQVGKKVTFKEEPIYQGYIYCKVKMSPEVRDIVNDMDRIVGFVGEARDEDKKLIPERMDPEDIEGIKASEKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGEYVVKVNTFGRNSDVRLDWNGVRKLTELEVETWFEETRRAMDATYMERQSGRG 401          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: D7FH57_ECTSI (Putative transcription antitermination protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH57_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 1.930e-125
Identity = 176/212 (83.02%), Postives = 199/212 (93.87%), Query Frame = 0
Query:    4 QVPTDDEFHWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKVQDGEYMVKVNTFGRNSDVRLDWGGVRKLSELEVETWFEDTRRAMDATYMERASGRG 215
            +VPTD+EFHWYLLRCFATYE+RCRN+VES+LEGAGLGDR+ EIWVPCRQVPKQVG KVTFKEEPIYQGY+YC +KM+ +VRD+VNDMDRIVGFVGE RDEDK+LIP RM+P DIEGI+ SE+ALG NKIP LLGVGDLVE+SEGPFA+K GE+SK++DGEY+VKVNTFGRNSDVRLDW GVRKL+ELEVETWFE+TRRAMDATYMER SGRG
Sbjct:  213 KVPTDEEFHWYLLRCFATYEVRCRNSVESYLEGAGLGDRVEEIWVPCRQVPKQVGTKVTFKEEPIYQGYIYCKVKMSLEVRDIVNDMDRIVGFVGEARDEDKKLIPERMEPEDIEGIKASEKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGEYVVKVNTFGRNSDVRLDWDGVRKLTELEVETWFEETRRAMDATYMERQSGRG 424          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A5P1REJ7_9GAMM (Transcription termination/antitermination protein NusG n=1 Tax=Neptunomonas concharum TaxID=1031538 RepID=A0A5P1REJ7_9GAMM)

HSP 1 Score: 92.4 bits (228), Expect = 1.860e-19
Identity = 55/178 (30.90%), Postives = 93/178 (52.25%), Query Frame = 0
Query:   12 HWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPD-LLGVGDLVEVSEGPFAMKNGEISKVQDGEYMVKVNT--FGRNSDVRLDWGGVRK 186
            +WY++   + YE R + ++E  +  AGL D   +I VP  +V +    K    E   Y GYV+  ++M  +   +V   DR++GF+G T D+     P+ M   + E ++    + G+   P  +   G++V VS+GPFA  NG + +V   +  +KV    FGR++ V L++G V K
Sbjct:    4 NWYVVHAHSNYEKRVKGSLEERIALAGLEDMFGDILVPTEEVVEIREGKKRKSERKFYPGYVFVEMEMTDETWHLVKHTDRVLGFIGGTADK-----PAPMTAREAEDMKSRVESGGDKPKPKTVFEPGEMVRVSDGPFADFNGVVEEVDYDKNRLKVAVLIFGRSTPVELEFGQVEK 176          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A081FUP3_9GAMM (Transcription termination/antitermination protein NusG n=5 Tax=Marinobacterium TaxID=48075 RepID=A0A081FUP3_9GAMM)

HSP 1 Score: 91.7 bits (226), Expect = 3.910e-19
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 0
Query:   13 WYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKV--QDGEYMVKVNTFGRNSDVRLDWGGVRK 186
            WY++  ++ YE + + A+   ++  G+ D   EI VP  +V +    K    E   Y GYV  N+ MN Q   +V D  R++GF+G T D+   +     +    E ++  E  + + K   +   G++V V++GPFA  NG + +V  +     V V  FGR++ V L++G V K
Sbjct:    8 WYVVHAYSNYEKKVKEALTESIDRHGMQDLFGEILVPTEEVVEIRDGKKRKSERKFYPGYVLVNMVMNDQTWHLVKDTPRVLGFIGGTADKPAPITEKEAN----EILQRVESGVDKPKPKTVFEPGEMVRVTDGPFADFNGVVEEVNYEKNRLQVAVLIFGRSTPVELEFGQVEK 179          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A432EMG5_9GAMM (Transcription termination/antitermination protein NusG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A432EMG5_9GAMM)

HSP 1 Score: 88.2 bits (217), Expect = 7.600e-18
Identity = 53/181 (29.28%), Postives = 89/181 (49.17%), Query Frame = 0
Query:    9 DEFHWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDL-LGVGDLVEVSEGPFAMKNGEISKV--QDGEYMVKVNTFGRNSDVRLDWGGVRK 186
            ++  W++++ F+ YE + + A+    E AGL     +I VP  +V +  G +    E   + GYV  N+ M      +VN + R+ GF+G T  +     P  +   + E I +  +   E   P      G+++ V+EGPFA  NG +  V  +  +  V V+ FGR++ V LD+G V K
Sbjct:    2 EKMQWFVVQAFSGYEKKVQEAIREHAERAGLEHMFGDILVPTEEVVEMKGGEKKTSERKFFPGYVLVNMVMTDDTWHLVNGVPRVSGFIGGTATK-----PIPISDKEAEAIIQQVQEGVEKPRPKFSFAPGEMIRVTEGPFADFNGVVEDVNYEKNKIRVSVSIFGRSTPVELDFGQVEK 177          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A1J4QGX1_9GAMM (Transcription termination/antitermination protein NusG n=10 Tax=Aeromonadales TaxID=135624 RepID=A0A1J4QGX1_9GAMM)

HSP 1 Score: 87.8 bits (216), Expect = 1.110e-17
Identity = 50/182 (27.47%), Postives = 91/182 (50.00%), Query Frame = 0
Query:    7 TDDEFHWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKVQDGEYMVKVNT--FGRNSDVRLDWGGVRK 186
            ++    WY+++ F+ YE R   ++   ++  G+ D+  E+ VP  +V +    +    E   + GYV   ++MN     +V  + R++GF+G T +    +     D      +   + A+ + K   L   G++V VS+GPFA  NG + +V   +  VKV+   FGR++ V L++G V K
Sbjct:    2 SEQRMRWYVVQAFSGYEGRVSKSLREHIKMHGMEDQFGEVLVPTEEVVEMRAGQKRKSERKFFPGYVLVQMQMNDATWHLVRSIPRVMGFIGGTPERPAPISDKEADAI----LNRLQDAIDKPKPKTLFEPGEVVRVSDGPFADFNGVVEEVDYEKSRVKVSVLIFGRSTPVELEFGQVEK 179          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A349X7E0_9GAMM (Transcription termination/antitermination protein NusG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349X7E0_9GAMM)

HSP 1 Score: 87.4 bits (215), Expect = 1.380e-17
Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = 0
Query:   13 WYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPK-QVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGI-RESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKV--QDGEYMVKVNTFGRNSDVRLDWGGVRK 186
            WY+++ F+ YE R + A++  ++  GL +   +I VP  +V + + G+K T  E   Y GYV   +KMN +   +V    R+ GF+G      K   P+ +  A+   I R+ E      K       G+LV V+EGPFA  NG +  V  +  +  V V+ FGR++ V LD+G V K
Sbjct:    3 WYVVQAFSNYEKRVQLALQERIDRLGLQEFFGQILVPTEEVVEMRAGQKRT-SERKFYPGYVLVQMKMNDESWHLVKSTPRVSGFIGG-----KASDPTPLTDAEALAILRQVEDGADSPKHKFSFEPGELVRVTEGPFADFNGTVEDVNYEKSKLRVAVSIFGRSTPVELDFGQVEK 174          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: A0A849DYT5_9GAMM (Transcription termination/antitermination protein NusG n=1 Tax=Enterobacterales bacterium TaxID=1993870 RepID=A0A849DYT5_9GAMM)

HSP 1 Score: 87.0 bits (214), Expect = 2.020e-17
Identity = 53/176 (30.11%), Postives = 92/176 (52.27%), Query Frame = 0
Query:   13 WYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKVQDGEYMVKVNT--FGRNSDVRLDWGGVRK 186
            WY+++ ++ YEL+ +N +   +E  GL D   EI VP  ++ +    +    E   + GYV   ++M+     +V +  R++GF+G T D   R  P     A+ E ++  E +  + K   L   G+++ V++GPFA  NG + KV   +  VKV+   FGR++ V L++  V K
Sbjct:    5 WYVVQAYSGYELKVKNLMAERIEREGLSDHFGEILVPTEEIVEMRAGQQRKSERKFFPGYVLVEMEMDDDSWHLVKNTPRVLGFIGGTAD---RPAPISEKEAN-EILQRVEDSTDKPKPKVLFEPGEVIRVTDGPFADFNGVVEKVDYDKSRVKVSVSIFGRSTPVDLEFSQVEK 176          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: C7R863_KANKD (Transcription termination/antitermination protein NusG n=11 Tax=Proteobacteria TaxID=1224 RepID=C7R863_KANKD)

HSP 1 Score: 86.7 bits (213), Expect = 2.830e-17
Identity = 51/177 (28.81%), Postives = 89/177 (50.28%), Query Frame = 0
Query:   13 WYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLL-GVGDLVEVSEGPFAMKNGEISKV--QDGEYMVKVNTFGRNSDVRLDWGGVRK 186
            WY+++ F+ YE + +  +E  ++ AGL D+  E+ VP  +V +    +    E   + GYV   + M+ +   VV +  R++GF+G T D      P+ +   +   I       G+   P +L   G++V V++GPFA  NG +  V  +     V V+ FGR++ V L++  V K
Sbjct:    5 WYVVQAFSGYENKVKTMLEERIQLAGLEDKFGEVLVPTEEVVEMRAGQKRRSERKFFPGYVLVQMDMDEESWQVVRNTPRVMGFIGGTSDR-----PAPISEKEANAILNRIEDSGDKPKPKVLFEPGEMVRVTDGPFADFNGVVESVNYEKSRLQVSVSIFGRSTPVELEFSQVEK 176          
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Match: UPI000480AFF3 (transcription termination/antitermination protein NusG n=1 Tax=Oceanobacter kriegii TaxID=64972 RepID=UPI000480AFF3)

HSP 1 Score: 85.9 bits (211), Expect = 5.630e-17
Identity = 49/176 (27.84%), Postives = 85/176 (48.30%), Query Frame = 0
Query:   13 WYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPCRQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGETRDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFAMKNGEISKV--QDGEYMVKVNTFGRNSDVRLDWGGVRK 186
            WY++  ++ YE R ++A++  +E  G+ D   ++ VP  +V +    K    +   Y GYV   ++MN     +V   DR++GF+G T D+   +     D      +R  E  +       +   G++V V++GPFA  NG +  V  +     V V  FGR++ V L++  V K
Sbjct:    5 WYVVHAYSGYEKRVQSALKERIERLGMQDYFGDVLVPTEEVVEVRDGKKRKSQRRFYPGYVLVQMEMNDDSWHLVKQTDRVMGFIGGTADKPAPITEKEADAI----LRRVEEGVDRPTHKTVYEPGEVVRVTDGPFADFNGTVENVDYEKSRLQVAVTIFGRSTPVELEFTQVEK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9573.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6X8_9PHAE5.180e-13183.49NGN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FH57_ECTSI1.930e-12583.02Putative transcription antitermination protein n=1... [more]
A0A5P1REJ7_9GAMM1.860e-1930.90Transcription termination/antitermination protein ... [more]
A0A081FUP3_9GAMM3.910e-1930.11Transcription termination/antitermination protein ... [more]
A0A432EMG5_9GAMM7.600e-1829.28Transcription termination/antitermination protein ... [more]
A0A1J4QGX1_9GAMM1.110e-1727.47Transcription termination/antitermination protein ... [more]
A0A349X7E0_9GAMM1.380e-1733.15Transcription termination/antitermination protein ... [more]
A0A849DYT5_9GAMM2.020e-1730.11Transcription termination/antitermination protein ... [more]
C7R863_KANKD2.830e-1728.81Transcription termination/antitermination protein ... [more]
UPI000480AFF35.630e-1727.84transcription termination/antitermination protein ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006645NusG, N-terminalSMARTSM00738nusgn_4coord: 10..124
e-value: 3.0E-4
score: 30.1
IPR006645NusG, N-terminalPFAMPF02357NusGcoord: 12..99
e-value: 1.2E-9
score: 38.5
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 137..187
e-value: 3.9E-7
score: 31.8
IPR036735NusG, N-terminal domain superfamilyGENE3D3.30.70.940coord: 7..123
e-value: 2.7E-17
score: 64.7
IPR036735NusG, N-terminal domain superfamilySUPERFAMILY82679N-utilization substance G protein NusG, N-terminal domaincoord: 11..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..258
NoneNo IPR availableCDDcd06091KOW_NusGcoord: 138..186
e-value: 4.73608E-6
score: 40.9036
IPR043425NusG-likePANTHERPTHR30265RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSGcoord: 6..187
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 136..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9573contigH-canaliculatus_M_contigs9573:54..4176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9573.1.1mRNA_H-canaliculatus_M_contigs9573.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9573 54..4176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9573.1.1 ID=prot_H-canaliculatus_M_contigs9573.1.1|Name=mRNA_H-canaliculatus_M_contigs9573.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=259bp
MRAQVPTDDEFHWYLLRCFATYELRCRNAVESWLEGAGLGDRMAEIWVPC
RQVPKQVGKKVTFKEEPIYQGYVYCNLKMNTQVRDVVNDMDRIVGFVGET
RDEDKRLIPSRMDPADIEGIRESERALGENKIPDLLGVGDLVEVSEGPFA
MKNGEISKVQDGEYMVKVNTFGRNSDVRLDWGGVRKLSELEVETWFEDTR
RAMDATYMERASGRGRGRGGRRRGGGSGFVYGGGSGNEAAGRGGRGRGER
DGGVSGGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR043425NusG-like
IPR036735NGN_dom_sf
IPR014722Rib_L2_dom2
IPR006645NGN_dom