prot_H-canaliculatus_M_contigs9405.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9405.1.1
Unique Nameprot_H-canaliculatus_M_contigs9405.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length40
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9405.1.1 vs. uniprot
Match: A0A6H5JI75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI75_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.870e-16
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 QAFAIKLTPPELGAAICAFDKDGDGFVSCPEFLRTFFRLG 40
            +AF I+LTPPELGAAI AFDKDGDG +SCPEFLRTFFRLG
Sbjct:  542 RAFGIRLTPPELGAAIHAFDKDGDGSISCPEFLRTFFRLG 581          
BLAST of mRNA_H-canaliculatus_M_contigs9405.1.1 vs. uniprot
Match: D8LDZ3_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ3_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 8.010e-16
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 QAFAIKLTPPELGAAICAFDKDGDGFVSCPEFLRTFFRLG 40
            +AF I+LTPPELGAAI AFDKDGDG +SCPEFLRTFFRLG
Sbjct:  250 RAFGIQLTPPELGAAIHAFDKDGDGSISCPEFLRTFFRLG 289          
BLAST of mRNA_H-canaliculatus_M_contigs9405.1.1 vs. uniprot
Match: A0A812XBH0_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XBH0_SYMMI)

HSP 1 Score: 55.1 bits (131), Expect = 1.110e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 QAFAIKLTPPELGAAICAFDKDGDGFVSCPEFLRTFFRLG 40
            + F I L+PPELGA +  FDK+GDG +SCPEF+  F ++G
Sbjct:  118 RVFNIILSPPELGALMSYFDKNGDGRISCPEFIIQFIKVG 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9405.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JI75_9PHAE5.870e-1685.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ3_ECTSI8.010e-1685.00Hypothetical leucine rich repeat calcium binding p... [more]
A0A812XBH0_SYMMI1.110e-755.00Calmodulin (Fragment) n=1 Tax=Symbiodinium microad... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..39
e-value: 1.8E-5
score: 26.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 20..32
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 7..40
score: 11.277538
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 5..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9405contigH-canaliculatus_M_contigs9405:134..253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9405.1.1mRNA_H-canaliculatus_M_contigs9405.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9405 134..253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9405.1.1 ID=prot_H-canaliculatus_M_contigs9405.1.1|Name=mRNA_H-canaliculatus_M_contigs9405.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=40bp
QAFAIKLTPPELGAAICAFDKDGDGFVSCPEFLRTFFRLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS