prot_H-canaliculatus_M_contigs940.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs940.1.1
Unique Nameprot_H-canaliculatus_M_contigs940.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length225
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs940.1.1 vs. uniprot
Match: D7FH16_ECTSI (Zinc finger family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH16_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 8.320e-106
Identity = 151/215 (70.23%), Postives = 170/215 (79.07%), Query Frame = 0 
Query:    1 ADPGDRTSACPICLSDIQAGEAFTVDCEEQHTFCVDCLHSHCSVQLLDSGLIPACPLSNMACGHELSQEEVERVFLLRKYSAATDSCRSGEAASGPREGGEEQEADKRALDTCRTLLTRRGLESTGAIPCVSPNCGNWMVHEGGGQRVKCSSCLVEFCGRCKRSPYHYTVDCDGVIAAAREWSSWLTEGKAVFLEAMAARDDEHKALLNQHNIRK 215
            A P    S CP+C  DIQAGE FTVDC+EQHTFCVDCLH HC VQLLDS LIPACPLS M CGHEL QEEVERVFLL+ YS+A+   + G   +G        E D+RALDTCR LLTRRGLESTGAIPCVSP CGNWMV EGGGQRVKC+SCLVEFC RCKRSPYHY  +CD V+  +REWS WL+EGKA FL AMAA+DD+H+ALL++HN +K
Sbjct:   61 AAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDS-LIPACPLSTMKCGHELGQEEVERVFLLKSYSSASAGGKDGGDTTGV------SEEDRRALDTCRNLLTRRGLESTGAIPCVSPECGNWMVPEGGGQRVKCASCLVEFCRRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQDDQHRALLDRHNRKK 268
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs940.1.1 vs. uniprot
Match: A0A6H5K3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X2_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 3.020e-101
Identity = 147/209 (70.33%), Postives = 164/209 (78.47%), Query Frame = 0 
Query:    1 ADPGDRTSACPICLSDIQAGEAFTVDCEEQHTFCVDCLHSHCSVQLLDSGLIPACPLSNMACGHELSQEEVERVFLLRKYSAATDSCRSGEAASGPREGGEEQEADKRALDTCRTLLTRRGLESTGAIPCVSPNCGNWMVHEGGGQRVKCSSCLVEFCGRCKRSPYHYTVDCDGVIAAAREWSSWLTEGKAVFLEAMAARDDEHKALLN 209
            A P    S CP+C  DIQAGE FTVDCEEQHTFCVDCLH HC VQLLDS LIPACPLS M CGHEL QEEVERVFLL+ YS+A+   + G   +G        E D+RALDTCR LLTRRGLESTGAIPC SP CGNWMV EGGGQRVKC+SCLVEFC RCKRSPYHY  +CD V+  +REWS WL+EGKA FL AMAA++D+H+ALL+
Sbjct:  334 AAPAASQSPCPVCFEDIQAGEVFTVDCEEQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERVFLLKSYSSASAGGKDGGETTGA------SEEDRRALDTCRNLLTRRGLESTGAIPCASPECGNWMVPEGGGQRVKCASCLVEFCSRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQEDQHRALLD 536
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs940.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH16_ECTSI8.320e-10670.23Zinc finger family protein, putative n=1 Tax=Ectoc... [more]
A0A6H5K3X2_9PHAE3.020e-10170.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 111..172
e-value: 1.6E-6
score: 37.7
IPR002867IBR domainPFAMPF01485IBRcoord: 117..172
e-value: 1.9E-8
score: 34.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 5..88
e-value: 4.7E-8
score: 34.8
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 8..191
IPR044066TRIAD supradomainPROSITEPS51873TRIADcoord: 6..225
score: 16.473106
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 119..173
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs940contigH-canaliculatus_M_contigs940:34..2209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs940.1.1mRNA_H-canaliculatus_M_contigs940.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs940 34..2210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs940.1.1 ID=prot_H-canaliculatus_M_contigs940.1.1|Name=mRNA_H-canaliculatus_M_contigs940.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=225bp
ADPGDRTSACPICLSDIQAGEAFTVDCEEQHTFCVDCLHSHCSVQLLDSG
LIPACPLSNMACGHELSQEEVERVFLLRKYSAATDSCRSGEAASGPREGG
EEQEADKRALDTCRTLLTRRGLESTGAIPCVSPNCGNWMVHEGGGQRVKC
SSCLVEFCGRCKRSPYHYTVDCDGVIAAAREWSSWLTEGKAVFLEAMAAR
DDEHKALLNQHNIRKQEHDCAVKEA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044066TRIAD_supradom
IPR031127E3_UB_ligase_RBR
IPR013083Znf_RING/FYVE/PHD
IPR002867IBR_dom