prot_H-canaliculatus_M_contigs9234.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9234.1.1
Unique Nameprot_H-canaliculatus_M_contigs9234.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length239
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9234.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 166..199
e-value: 13.0
score: 13.9
coord: 95..128
e-value: 27.0
score: 11.2
coord: 61..94
e-value: 38.0
score: 9.8
coord: 27..60
e-value: 27.0
score: 11.1
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 180..212
e-value: 27.0
score: 12.2
coord: 7..39
e-value: 250.0
score: 5.1
coord: 143..178
e-value: 1100.0
score: 0.5
coord: 41..73
e-value: 420.0
score: 3.5
coord: 75..107
e-value: 63.0
score: 9.5
coord: 109..141
e-value: 0.21
score: 20.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 124..239
e-value: 2.6E-17
score: 64.9
coord: 1..123
e-value: 1.3E-19
score: 72.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..234
NoneNo IPR availablePFAMPF14559TPR_19coord: 73..133
e-value: 2.0E-7
score: 31.4
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 1..221
coord: 175..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9234contigH-canaliculatus_M_contigs9234:876..4437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9234.1.1mRNA_H-canaliculatus_M_contigs9234.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9234 867..4437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9234.1.1 ID=prot_H-canaliculatus_M_contigs9234.1.1|Name=mRNA_H-canaliculatus_M_contigs9234.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=239bp
MLEKRVGAIDVAREKFKMCLKVNPRNAKGYQAWGVLEASEDNIALATELF
RAGLEQRPDNTYILQAWALMEAKQGDVNSAISLLKKAILKRPRDGAVWQA
YALLLKDMGDIEGARALFKKGVSQAPKHCPTWQAWGMLEWELGQISRARK
LFQEGVWENPKGSHVVRILQAWGILEATQGNWDEARKYFGFALARDPYSL
PVMVAWALMEEYVGDIGRARQLFEIATNTQADNAEIWKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044624Mbb1-like
IPR011990TPR-like_helical_dom_sf
IPR003107HAT
IPR019734TPR_repeat