prot_H-canaliculatus_M_contigs9219.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9219.1.1
Unique Nameprot_H-canaliculatus_M_contigs9219.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length56
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: X2KU57_SCYLO (TypA/BipA GTP binding protein n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KU57_SCYLO)

HSP 1 Score: 81.3 bits (199), Expect = 1.350e-16
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
Query:   10 QIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGMPKPRVKEMAPLQ 54
            QIVYTSAIQGIAGDE DAMA++MEPLFKAIMGMPKP VKE+APLQ
Sbjct:  238 QIVYTSAIQGIAGDEPDAMAKNMEPLFKAIMGMPKPLVKELAPLQ 282          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A6H5KYY6_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYY6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.060e-14
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 QTDVAFPSTQIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGMPKPRVKEMAPLQ 54
            Q+D    + +IVYTSAI+GIAG+E D M E+MEPLFKAIMGMPKP VKE APLQ
Sbjct:  242 QSDFQANANEIVYTSAIKGIAGNEPDEMEENMEPLFKAIMGMPKPLVKETAPLQ 295          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A836CE33_9STRA (PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE33_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.390e-11
Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 QTDVAFPSTQIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGMPKPRVKEMAPLQV 55
            Q + A    Q+VYTSAIQGIAGDE DA+ ++M+PLF+AI+ MP+P V+  APLQ+
Sbjct:  227 QANDAQSDFQVVYTSAIQGIAGDEADALKDNMQPLFEAILNMPRPVVRPNAPLQM 281          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A7S4DC59_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC59_HETAK)

HSP 1 Score: 62.0 bits (149), Expect = 8.070e-10
Identity = 26/45 (57.78%), Postives = 39/45 (86.67%), Query Frame = 0
Query:   11 IVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGMPKPRVKEMAPLQV 55
            +VYTSAI+G+AG +  A+ E+M+PLF+AI+G+P+PRV+  APLQ+
Sbjct:   60 VVYTSAIKGVAGTDAHALEENMDPLFEAILGLPRPRVRAAAPLQL 104          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A349SCU0_9GAMM (50S ribosomal subunit assembly factor BipA n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A349SCU0_9GAMM)

HSP 1 Score: 51.2 bits (121), Expect = 5.180e-6
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0
Query:   11 IVYTSAIQGIAGDEVDAMAEDMEPLFKAIMG-MPKPRVKEMAPLQV 55
            I+Y SA++GIAG +V+AMA DMEPLFK I+  +P P V+  APLQ+
Sbjct:  162 IIYASALEGIAGLDVEAMATDMEPLFKEIVEKVPHPDVEVDAPLQM 207          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A7Y2EMT9_9GAMM (50S ribosomal subunit assembly factor BipA n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y2EMT9_9GAMM)

HSP 1 Score: 50.8 bits (120), Expect = 7.090e-6
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   11 IVYTSAIQGIAGDEVDAMAEDMEPLFKAIMG-MPKPRVKEMAPLQV 55
            +VYTSAI+GIAG + DAMA DM+PLF+ ++  +P P V    PLQ+
Sbjct:  131 VVYTSAIEGIAGLDHDAMAPDMQPLFETVVQQVPAPEVNSQGPLQM 176          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A1I1IWE1_9GAMM (50S ribosomal subunit assembly factor BipA n=2 Tax=Marinospirillum TaxID=64968 RepID=A0A1I1IWE1_9GAMM)

HSP 1 Score: 50.8 bits (120), Expect = 7.090e-6
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   11 IVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGM-PKPRVKEMAPLQV 55
            I+Y SA+ GIAGD+ + MAEDM PLFKAI  + P P V    PLQ+
Sbjct:  162 IIYASALNGIAGDDPENMAEDMAPLFKAITDLVPAPNVDPEGPLQL 207          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A3B9GT83_9PROT (50S ribosomal subunit assembly factor BipA n=1 Tax=Hyphomonas adhaerens TaxID=81029 RepID=A0A3B9GT83_9PROT)

HSP 1 Score: 50.8 bits (120), Expect = 7.090e-6
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    1 QTDVAFPSTQIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMG-MPKPRVKEMAPLQV 55
            QTD  FP   +VY S  QGIAG EVDAMA+++EPLF  I+  +P P V   APLQ+
Sbjct:  160 QTD--FP---VVYASGFQGIAGMEVDAMADNLEPLFDMIINEVPPPVVNTTAPLQM 210          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: F3L2E7_9GAMM (50S ribosomal subunit assembly factor BipA n=1 Tax=Aequoribacter fuscus TaxID=2518989 RepID=F3L2E7_9GAMM)

HSP 1 Score: 50.4 bits (119), Expect = 9.710e-6
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 QTDVAFPSTQIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMG-MPKPRVKEMAPLQV 55
            +T + FP   IVYTSAIQGIAG + + MA+DM PLF  I+  +P+P V   +PLQ+
Sbjct:  155 ETQLDFP---IVYTSAIQGIAGLDPNEMADDMTPLFNEIIKRVPEPEVDATSPLQM 207          
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Match: A0A1Y0I3L4_9GAMM (50S ribosomal subunit assembly factor BipA n=1 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0I3L4_9GAMM)

HSP 1 Score: 49.3 bits (116), Expect = 2.490e-5
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   11 IVYTSAIQGIAGDEVDAMAEDMEPLFKAIMG-MPKPRVKEMAPLQV 55
            ++Y SA+ GIAGD+ +AMAEDM PLF+ I+  +P P V   AP Q+
Sbjct:  162 VIYASALNGIAGDDPEAMAEDMTPLFQMIVDTVPSPSVDPDAPFQM 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9219.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
X2KU57_SCYLO1.350e-1688.89TypA/BipA GTP binding protein n=1 Tax=Scytosiphon ... [more]
A0A6H5KYY6_9PHAE1.060e-1470.37Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CE33_9STRA1.390e-1158.18PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S4DC59_HETAK8.070e-1057.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A349SCU0_9GAMM5.180e-658.7050S ribosomal subunit assembly factor BipA n=8 Tax... [more]
A0A7Y2EMT9_9GAMM7.090e-654.3550S ribosomal subunit assembly factor BipA n=1 Tax... [more]
A0A1I1IWE1_9GAMM7.090e-656.5250S ribosomal subunit assembly factor BipA n=2 Tax... [more]
A0A3B9GT83_9PROT7.090e-655.3650S ribosomal subunit assembly factor BipA n=1 Tax... [more]
F3L2E7_9GAMM9.710e-651.7950S ribosomal subunit assembly factor BipA n=1 Tax... [more]
A0A1Y0I3L4_9GAMM2.490e-552.1750S ribosomal subunit assembly factor BipA n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9219contigH-canaliculatus_M_contigs9219:89..256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9219.1.1mRNA_H-canaliculatus_M_contigs9219.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9219 89..256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9219.1.1 ID=prot_H-canaliculatus_M_contigs9219.1.1|Name=mRNA_H-canaliculatus_M_contigs9219.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=56bp
QTDVAFPSTQIVYTSAIQGIAGDEVDAMAEDMEPLFKAIMGMPKPRVKEM
APLQV*
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