prot_H-canaliculatus_M_contigs9179.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9179.1.1
Unique Nameprot_H-canaliculatus_M_contigs9179.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length263
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: A0A6H5JSJ2_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ2_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 2.900e-105
Identity = 184/262 (70.23%), Postives = 209/262 (79.77%), Query Frame = 0
Query:    1 QRVKVHLSVSSKGGNLRTASSSSSSRLGSSRNDRNKSSAMANSKEGSEG-------------GKEEMPRGHLRDDGLEQVTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLANLEGMCVDAATGGSLPARRGEQGAAEGGEESERLMSLLAEDPLFDAVPREAEPACAPNVVRFRFTGAGAYGIPPSQLAIKFGVNLDAVNRAILRAVNNGA 249
            +RVKVHLSVSSKGGNLRTASS +SS   SSR+DRNKS +++ S  G  G             GK E P+GHLRDDGLEQVTFTSSLPLSLARFQ+WVC+GMP GVVRVKGVLAF EDRLTRSVFNMSGRRRLSFE+DG WQGPMS YLVVIGVGMDR  VL+ LEG+ VD ++G          G+AE  +E+ERLM +L EDPLFD+V  EA P+CA +VVRFRFTGAGAYG+PP+QL IKFGVNLDAVNR+ILRAVN+GA
Sbjct:  251 ERVKVHLSVSSKGGNLRTASSLASS-PSSSRHDRNKSRSVSPSVAGGGGAGHECSAEGSAEVGKTEAPQGHLRDDGLEQVTFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGMWQGPMSLYLVVIGVGMDRVGVLSALEGLRVDTSSGAGSERNCVGGGSAELEKETERLMRILEEDPLFDSVSCEATPSCAKHVVRFRFTGAGAYGVPPTQLCIKFGVNLDAVNRSILRAVNSGA 511          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: D8LTM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM2_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.100e-76
Identity = 130/183 (71.04%), Postives = 152/183 (83.06%), Query Frame = 0
Query:   78 ARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLANLEGMCVDAATGGSLPARRGEQGAAEGGEESERLMSLLAEDPLFDAVPREAEPACAPNVVRFRFTGAGAYGIPPSQLAIKFGVNLDAVNRAILRAVNNGAPSNTTPSSTSS 260
            +RFQ+WVC+GMP GVVRVKGVLAF EDRLTRSVFNMSGRRRLSFE+DG WQGPMS +LVVIGVGMDRA VL+ LEG+ VD ++G         +G+AE  +E+ER+  +L +DPLFD VPREA P+CA +VVRFRFTGAGAYGIPPSQL IKFGVNLDAVNR+ILRAVN+GA    TP S++S
Sbjct:  283 SRFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGVWQGPMSLHLVVIGVGMDRAGVLSALEGLRVDTSSGAGSERHCDGRGSAELEKETERMTRILEDDPLFDPVPREATPSCAQHVVRFRFTGAGAYGIPPSQLCIKFGVNLDAVNRSILRAVNSGA----TPGSSTS 461          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: C1DY15_MICCC (CobW C-terminal domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DY15_MICCC)

HSP 1 Score: 85.1 bits (209), Expect = 4.370e-15
Identity = 70/216 (32.41%), Postives = 97/216 (44.91%), Query Frame = 0
Query:   55 PRGHLRDDGLEQ-------VTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGP---------------MSPYLVVIGVGMDRARVLANLEGMCVDAATGGSLPARRGEQGAAEGGEESERLMSLLAEDPLFDAVPREAEPACAPNVVRFRFTGAGAYGIPPSQLAIKFGVNLDAVNRAILRAVNNG 248
            P G  R DG ++       V +    P SLA FQ WV  G+PPGVVR KG + F E+   +  F++SGRRR+  E     +GP                +  L++IG  +DR   LA L  +       G L       GA E      RL  + A D           P  A     FR TGA A G+   ++    GV+++AVNR ++RA+N+G
Sbjct:  368 PTGRSRSDGSDESGADFGSVAYEGG-PTSLASFQAWVACGIPPGVVRAKGFVTFAEEPGVQYDFHLSGRRRVEIEPSEN-RGPPGFESAFSKTPAKTRSATRLILIGPDIDRDVALAQLGDLESPPPRSGDLDVAAALAGARELVGSDLRLEWVEAGD--------WCHPLAAATCAHFRLTGAAANGLTVDEMERNHGVDMNAVNRDLVRALNSG 573          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: A0A835Z3X7_9STRA (CobW C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.060e-10
Identity = 44/125 (35.20%), Postives = 58/125 (46.40%), Query Frame = 0
Query:   67 VTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNM-------------------------------------SGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLANLEGM 154
            VT+TS+ PL LA FQ+W+  G+P G+VR KG+L+F      R+VFN+                                     SGRRR S E  G W     PYLV+IG G+D A ++  L  M
Sbjct:  141 VTYTSTRPLRLALFQDWIIAGLPAGLVRAKGMLSFATAPPRRAVFNLNRPPRFTLQTNATSSXXXXXXXXXXXXXXXXXXXXXXSGRRRCSVEPGGAWASAPQPYLVMIGEGLDAAALITALTRM 265          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: A0A4V0XD89_9CYAN (GTP-binding protein n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4V0XD89_9CYAN)

HSP 1 Score: 63.5 bits (153), Expect = 6.410e-8
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   58 HLRDDGLEQVTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLANLE 152
            H   +G   ++F+S  P +L +FQ ++   +P  V R KG+L F+E    R VF+++G+R    +SD  W GP    LV+IG G+D AR+   L+
Sbjct:  294 HQAIEGFTSLSFSSEGPFALRKFQNFLDNQLPATVFRAKGILWFNESE-RRHVFHLAGKRFSLDDSD--WSGPRKNQLVLIGKGLDHARLRQQLQ 385          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: A0A2E0AP00_9CYAN (Cobalamin biosynthesis protein CobW n=1 Tax=Cyanobium sp. NAT70 TaxID=2024872 RepID=A0A2E0AP00_9CYAN)

HSP 1 Score: 61.6 bits (148), Expect = 2.740e-7
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   58 HLRDDGLEQVTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLANLEGMCVDAAT 160
            HL  DG   ++F+S+ P  L +FQ ++   +P GV R KG+L F E    R VF+++G+R    +SD  WQG     LV+IG  ++   + + L    V+AA+
Sbjct:  278 HLAIDGFTSLSFSSTGPFGLRKFQHFLDNQLPAGVFRAKGILWFEESE-RRHVFHLAGKRFSIDDSD--WQGDRKNQLVLIGRELNHDLLRSQLSDCLVNAAS 377          
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Match: A0A835RF25_VANPL (CobW C-terminal domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RF25_VANPL)

HSP 1 Score: 56.2 bits (134), Expect = 2.050e-5
Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = 0
Query:   61 DDGLEQVTFTSSLPLSLARFQEWVC--YGMPPGVVRVKGVLAFHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGV 140
            D   +   F S  PLSLA FQ  V        G++RVKG+L F EDR ++ VF  SG +R+   S   W G     LV+IG+
Sbjct:  287 DVSFQSAAFESEDPLSLAFFQSKVLRRINSTGGLLRVKGILCFSEDRESQFVFQWSGLKRVEAVSGRPWDGARKSCLVLIGI 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9179.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JSJ2_9PHAE2.900e-10570.23CobW C-terminal domain-containing protein n=1 Tax=... [more]
D8LTM2_ECTSI2.100e-7671.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
C1DY15_MICCC4.370e-1532.41CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A835Z3X7_9STRA1.060e-1035.20CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A4V0XD89_9CYAN6.410e-836.84GTP-binding protein n=1 Tax=Cyanobium sp. TaxID=21... [more]
A0A2E0AP00_9CYAN2.740e-735.92Cobalamin biosynthesis protein CobW n=1 Tax=Cyanob... [more]
A0A835RF25_VANPL2.050e-540.24CobW C-terminal domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011629Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminalSMARTSM00833CobW_C_3coord: 64..155
e-value: 1.2E-5
score: 34.7
IPR011629Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminalPFAMPF07683CobW_Ccoord: 65..153
e-value: 2.3E-12
score: 46.7
IPR036627CobW-like, C-terminal domain superfamilyGENE3D3.30.1220.10coord: 48..154
e-value: 1.2E-8
score: 36.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..63
NoneNo IPR availableSUPERFAMILY90002Hypothetical protein YjiA, C-terminal domaincoord: 67..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9179contigH-canaliculatus_M_contigs9179:1632..4788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9179.1.1mRNA_H-canaliculatus_M_contigs9179.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9179 1632..4788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9179.1.1 ID=prot_H-canaliculatus_M_contigs9179.1.1|Name=mRNA_H-canaliculatus_M_contigs9179.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=263bp
QRVKVHLSVSSKGGNLRTASSSSSSRLGSSRNDRNKSSAMANSKEGSEGG
KEEMPRGHLRDDGLEQVTFTSSLPLSLARFQEWVCYGMPPGVVRVKGVLA
FHEDRLTRSVFNMSGRRRLSFESDGQWQGPMSPYLVVIGVGMDRARVLAN
LEGMCVDAATGGSLPARRGEQGAAEGGEESERLMSLLAEDPLFDAVPREA
EPACAPNVVRFRFTGAGAYGIPPSQLAIKFGVNLDAVNRAILRAVNNGAP
SNTTPSSTSSTAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036627CobW-likC_sf
IPR011629Cbl_biosynth_CobW-like_C