prot_H-canaliculatus_M_contigs8862.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8862.1.1
Unique Nameprot_H-canaliculatus_M_contigs8862.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length272
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8862.1.1 vs. uniprot
Match: A0A835ZJK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.270e-11
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:   32 CISNAVEDYCETSSYHIGAVSIIFLAFVSTSCMVIMASTIACRCWLDSDPERQAMLMVLTGSPYASPRGGXXXXXXSPRFSP 113
            C+    E YCE   Y     S+IF+ F+ST    +MA TI C+CWLD+DPE+QA++MV++ SP+ +          +P F+P
Sbjct:  330 CLDQQQESYCEDPKYRYAGASMIFVVFISTFAQAMMACTIGCKCWLDADPEKQALMMVVSSSPHFNNGNFNSSTASTPMFTP 411
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8862.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZJK2_9STRA1.270e-1140.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 171..192
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 169..197
score: 9.764215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8862contigH-canaliculatus_M_contigs8862:614..3157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8862.1.1mRNA_H-canaliculatus_M_contigs8862.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8862 62..4096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8862.1.1 ID=prot_H-canaliculatus_M_contigs8862.1.1|Name=mRNA_H-canaliculatus_M_contigs8862.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=272bp
MLDINYIARCCSLLGDNCEVSNLCTQFVDDCCISNAVEDYCETSSYHIGA
VSIIFLAFVSTSCMVIMASTIACRCWLDSDPERQAMLMVLTGSPYASPRG
GGGGGGGSPRFSPRNTLLSGLLDVGNTTGGATPSTQTKRPPRDPFSAAPA
ERVVEEKTAAESLPFATREQCPQCGAVFGNMGTLLNHVERFHSKGKTMTG
TAPSSRASAASLAAAAESATEYRGGNERDRKGARPRPSLARKGSAYEPDE
GPVLFVRPPGVGVPPGRGPPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type