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Homology
BLAST of mRNA_H-canaliculatus_M_contigs8625.1.1 vs. uniprot
Match: D7FMX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX6_ECTSI) HSP 1 Score: 100 bits (249), Expect = 4.250e-19 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0
Query: 12 LAVSAVEGERDATAG-GVSKLPMIVQIRQRSRRRSKLIRDVKSLGRKGLWMEALTTAQVARGDGVVFDVYTYSVLMSAVA 90
++V+A+ GE+D G S +P++VQIRQR+RRRSKLI+ +KS GRKG W EALT A +AR DGVVFDVYTYSVLMSAVA
Sbjct: 1 MSVAAIHGEKDVRKGEACSNMPLVVQIRQRNRRRSKLIQTLKSQGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVA 80
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 138..234
e-value: 2.2E-10
score: 40.2
coord: 333..432
e-value: 4.0E-10
score: 39.4 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 44..213
e-value: 5.7E-46
score: 159.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 334..439
e-value: 2.0E-27
score: 97.7
coord: 224..333
e-value: 7.6E-36
score: 125.2 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 360..394
e-value: 1.2E-6
score: 26.4
coord: 256..289
e-value: 6.9E-7
score: 27.1
coord: 325..358
e-value: 1.7E-4
score: 19.6
coord: 80..113
e-value: 2.2E-7
score: 28.6
coord: 117..149
e-value: 3.0E-7
score: 28.2
coord: 186..219
e-value: 4.8E-6
score: 24.4
coord: 220..254
e-value: 1.2E-5
score: 23.2
coord: 396..429
e-value: 5.3E-5
score: 21.1
coord: 290..324
e-value: 3.8E-8
score: 31.0
coord: 150..184
e-value: 1.1E-5
score: 23.3 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 241..301
e-value: 1.3E-13
score: 50.8
coord: 73..125
e-value: 3.2E-5
score: 23.9 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 253..287
score: 12.408249 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 113..147
score: 11.629997 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 148..182
score: 11.114816 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 393..427
score: 9.711769 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 323..357
score: 9.810421 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 288..322
score: 12.539784 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 78..112
score: 12.857662 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 218..252
score: 11.169622 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 183..217
score: 11.619036 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 358..392
score: 12.309597 |
| None | No IPR available | PANTHER | PTHR47942 | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | coord: 216..370
coord: 322..430
coord: 52..245 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_M_contigs8625.1.1 ID=prot_H-canaliculatus_M_contigs8625.1.1|Name=mRNA_H-canaliculatus_M_contigs8625.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=439bp
MTAARSRTPLELAVSAVEGERDATAGGVSKLPMIVQIRQRSRRRSKLIRD
VKSLGRKGLWMEALTTAQVARGDGVVFDVYTYSVLMSAVARSGRWEETLV
LLEMMREEGVAPDHFAFGAAVNACAKGGQWERAVALLDQMRSEGLSPNVI
CFNTAADACARAGQWERALNLLAEMAAVGLSPNVTTYSSAVAACGNAGQW
ERALGLLEQMAGEGVSPNEFTFSAAVSACGKAGQWRPALDILRRMRATDC
PPNVTTYTAAIDACGKAGKWQLAQGLLAEMREKGVSPNVITFNSAISALG
NGGEWQKALELLEEMPSMGVQPNIYSYTAAVTACGDNNRWARALAVHEKM
RSEGIQGDEVSFTAAIDACAQGGAWHEALSLLDEMRAEGIPPTVRSFTTA
ISACGKGLQWARAVALLREMEEVGVSPNEVRVVQTVMCC back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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