prot_H-canaliculatus_M_contigs8571.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8571.1.1
Unique Nameprot_H-canaliculatus_M_contigs8571.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length170
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: D7FUI0_ECTSI (Rab32C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI0_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.920e-70
Identity = 114/173 (65.90%), Postives = 129/173 (74.57%), Query Frame = 0
Query:    1 WRTVGADRYQ----AFFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELFGPSMRRTAAAFSKGMKERGVVPRGLTLGPGGFRLTLAADTGTKDSSSGSCCG 169
            W   G DR +    A+FKGALGALVVYDISRPQTFDSA KWK+ELDANITLPNGSSLPV+LLGNKVDLEVA +D  YID FV+TH FVAWSDVSAKD  N DF +SVACLI+KLLCDEELFGP MRR+AAAFS  ++ R            G RL L+ +  T  +S+  CCG
Sbjct:   72 WDIAGQDRARKMNRAYFKGALGALVVYDISRPQTFDSAAKWKQELDANITLPNGSSLPVVLLGNKVDLEVAKVDVSYIDSFVETHRFVAWSDVSAKDAINGDFEMSVACLIQKLLCDEELFGPGMRRSAAAFSTRLQAREQSAHHTGSSSKGVRLALSTEA-TGQASNNGCCG 243          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.000e-29
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELFGPSMRRTAAAFS 129
            W   G DR+ A    ++K A GA++VYD++RP TF+   KWKEE+D  ++LPNG  +PV+LLGNK DLE A +DT Y+D F   HGFV W D SAK  +N +   +   L++K+L  E+      R T   F+
Sbjct:   63 WDIAGQDRFGAIARVYYKDAFGAMLVYDVTRPPTFEMVSKWKEEIDTKVSLPNGEPIPVVLLGNKSDLEKAKVDTEYLDEFCKQHGFVGWFDTSAK--TNQNIVEAATFLVEKIL--EKEIVHDKRETRGTFN 191          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 115 bits (288), Expect = 4.200e-29
Identity = 65/174 (37.36%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    1 WRTVGADRY----QAFFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVAC--LIKKLLCDEELFGPSMRRTAAAFSKGMKERGVVPRGLTLGPGGFRLTLAADTGTKDSSSGSCC 168
            W   G DR+    + ++K + GAL+VYD SRP TFD+  KWK E+D  + LP+GS++P++LL NK DL+ A +D  Y+D F   HGF+ W D SA+     + N+  AC  L+  LL   +L  P  +R+                  T  PG          G K SS GSCC
Sbjct:   63 WDIAGQDRFGVIARTYYKDSYGALIVYDASRPPTFDTVEKWKREIDDKVKLPDGSNIPIVLLANKCDLDKAEVDKSYLDQFCQEHGFIGWFDTSAR----LNINIEQACRFLVDNLLEKRDLLNPPAKRSD-----------------TFTPG--------QAGGKASSGGSCC 207          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A7S2UZM9_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM9_9STRA)

HSP 1 Score: 114 bits (285), Expect = 7.210e-29
Identity = 60/152 (39.47%), Postives = 86/152 (56.58%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELFGPSMRRTAAAFSKGMKERGVVPRGLTLGPGG 148
            W   G +R+ A    ++K A GA++VYD++RP TF+    WKE++D+ + LPNG  +PVILLGNK DLE A +D  Y+DGF + +GF  W D SA+   N     S   L+KK+L    + G  +++T   F+         PR  T   GG
Sbjct:   45 WDVAGQERFGAAARVYYKDAFGAMLVYDVTRPNTFEQVTNWKEDIDSKVMLPNGEPIPVILLGNKCDLEKAEVDKSYVDGFCEENGFAGWFDTSARTKQN--IAESAEFLVKKILSMNVIGG--LQQTRGTFNPAQ------PRSQTSSGGG 186          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A1V9YVF5_9STRA (Ras-related protein Rab n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YVF5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.890e-28
Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELFGPSMRRTAAAFSKGMKERGVVPRGLTLGPGGFRLTLAADTGTKDSSSGSCC 168
            W   G + ++A    ++K ALGALVVYD+SRP TF+SA+KWK+E+D  + LPN   LPVIL GNK DL  +++D  ++DGF +T+GF  W + SAK+ +N D   +   L+  +L   ++F                E+ V PR  T+ P        ++   K S S SCC
Sbjct:   66 WDIAGQEHFRALNRVYYKDALGALVVYDMSRPDTFESALKWKKEIDTKVELPNKKPLPVILCGNKCDL-ASDIDRAFLDGFCETNGFAGWFETSAKENTNIDE--ANKALVAAILAHRDVF----------------EKKVEPRRDTVRP-------TSEPYGKRSDSWSCC 211          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: K3WGR3_GLOUD (Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGR3_GLOUD)

HSP 1 Score: 112 bits (280), Expect = 8.290e-28
Identity = 55/121 (45.45%), Postives = 82/121 (67.77%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELF 117
            W   G + ++A    ++K ALGAL+VYDISRP+TF+S +KWK+E+D+ + LPN   LPVIL GNK DL   ++D G++D F +T+GF  W + SAK+  N D + S A L+  +L  +++F
Sbjct:   67 WDIAGQEHFRALNRVYYKDALGALLVYDISRPETFESVIKWKKEIDSKVELPNNKPLPVILCGNKCDLS-GDIDRGFLDAFCETNGFAGWFETSAKENKNID-DASKA-LVNSILEHQDIF 184          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.220e-27
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELFGPSMRR 123
            W   G DR+ A    ++K ALGA +VYD++RP TFD+ VKWK E+DA + LPN   LPV+LL NK D+E   +D+  +D F + HGF+AW + SAK     D   +   L++ +L  E++F    ++
Sbjct:   62 WDIAGQDRFGAISRVYYKDALGAFLVYDLARPATFDTVVKWKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAKTDHKID--AAARFLLENILEHEDIFAEKAKQ 186          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A1V9YUT9_9STRA (Ras-related protein Rab n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUT9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.330e-26
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELF 117
            W   G + ++A    ++K ALGALVVYD+SRP TF+SA+KWK+E+D  + LPN   LPVIL GNK DL    +D  ++D F +T+GF  W D SAK+  N D   +   L+  +L   ++F
Sbjct:   68 WDIAGQEHFRALNRVYYKDALGALVVYDMSRPDTFESAIKWKKEIDTKVELPNKKPLPVILCGNKCDL-AGEVDRAFLDEFCETNGFAGWFDTSAKENKNIDE--ANKALVAAILAHRDIF 185          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A836CJ20_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ20_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.420e-26
Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = 0
Query:    1 WRTVGADRY------QAFFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKL 110
            W   G DR       + +++GA GAL+VYDI+RP TFD   KWK +LDA + L +G SLP +L+GNK DLE+A +D  +++ +    GFV W D SAKD  + +F  +V+ LI+++
Sbjct:   65 WDIAGQDRSGGGTMNRVYYQGACGALIVYDITRPATFDGVAKWKADLDAKVLLEDGKSLPAVLIGNKKDLEIAIVDGDFMNRYCGESGFVTWKDTSAKDPEDTEFQSAVSVLIEEI 180          
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Match: A0A7S2G1P4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1P4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.370e-26
Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    1 WRTVGADRYQA----FFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNGSSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFNLSVACLIKKLLCDEELF 117
            W   G DR+ A    ++K A GA +VYD+SRP+TF++  KWK+E+D+ + LPNG  LPV+LL NK D+E   +D   ++ F   HGF+ W + SAK     D   +   L++ +L  E++F
Sbjct:    4 WDIAGQDRFGAIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKEIDSKVLLPNGKPLPVVLLANKCDIEGVEIDADELNRFCTEHGFITWFETSAKTDHKID--AAARYLVENVLSHEDIF 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8571.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUI0_ECTSI4.920e-7065.90Rab32C, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A7S2V4T6_9STRA2.000e-2944.36Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]
A0A6V1S8I5_HETAK4.200e-2937.36Ras-related protein Rab n=1 Tax=Heterosigma akashi... [more]
A0A7S2UZM9_9STRA7.210e-2939.47Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]
A0A1V9YVF5_9STRA7.890e-2838.37Ras-related protein Rab n=3 Tax=Saprolegniaceae Ta... [more]
K3WGR3_GLOUD8.290e-2845.45Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7S2S186_9STRA5.220e-2741.73Ras-related protein Rab n=1 Tax=Rhizochromulina ma... [more]
A0A1V9YUT9_9STRA1.330e-2644.63Ras-related protein Rab n=1 Tax=Thraustotheca clav... [more]
A0A836CJ20_9STRA1.420e-2643.97P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2G1P4_9STRA2.370e-2640.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 2..110
e-value: 5.4E-6
score: -34.9
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 10..121
NoneNo IPR availablePANTHERPTHR24073:SF862RAS-RELATED PROTEIN RAB-32coord: 10..121
NoneNo IPR availablePROSITEPS51419RABcoord: 1..168
score: 11.228289
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..110
e-value: 1.5E-17
score: 65.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..95
IPR001806Small GTPasePFAMPF00071Rascoord: 1..98
e-value: 3.4E-11
score: 43.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8571contigH-canaliculatus_M_contigs8571:691..3173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8571.1.1mRNA_H-canaliculatus_M_contigs8571.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8571 691..3288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8571.1.1 ID=prot_H-canaliculatus_M_contigs8571.1.1|Name=mRNA_H-canaliculatus_M_contigs8571.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=170bp
WRTVGADRYQAFFKGALGALVVYDISRPQTFDSAVKWKEELDANITLPNG
SSLPVILLGNKVDLEVANLDTGYIDGFVDTHGFVAWSDVSAKDTSNADFN
LSVACLIKKLLCDEELFGPSMRRTAAAFSKGMKERGVVPRGLTLGPGGFR
LTLAADTGTKDSSSGSCCG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase