prot_H-canaliculatus_M_contigs8518.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8518.1.1
Unique Nameprot_H-canaliculatus_M_contigs8518.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length795
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8518.1.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 2.820e-109
Identity = 427/829 (51.51%), Postives = 487/829 (58.75%), Query Frame = 0
Query:   59 IAGHGVAAVGGGGWVRHGMELDGLDTLWEIVLNATAGSQASMAASALIVDLHLRLGPKLKSKAAKIGAGFVDTCLRHLRAAVSRIRVLRASV----------------LETPTAPEDDGYSGDGEGRNGGPRDERGRAGGRTGGSVRKRWVRSSSLPPDKGRHTRKG----SRASRAASVEGRDARRAKEIEEAARRQQQGSGAVGL---YGSRVGDGGAPSSPRAQIASLHRRAGRCILLLSRFVTRSKEEENGAATGTTATLRVSVQVGPERVPVLEVRLPGGSILGELRSEVARRFRVPADSLELLKMVRRKGSMATERLEQDGASLESLGLAVPGQANN-----PASPAAATSTVTLQAMDGTAAXXXXXXXXXXXXXXXXXSAGST--PSPSVELLARMAPGAPYRSRGDQASGXXXXXXXXXXXXXXRAFSSITSXXXXXXXXXXXXXAPTAPAKGELGGGAPTAAGITGQQAGPGSD---------------PSGDLISMDDLLAGWNEDESPAHWPSLMTASEHPGAVTVLYRGRPATGAPGEEVTVVAAGSGVAGAGLP----AADSSCGGGGTGVSALSAIESSPTAETTGTAL-----GP-KKLSFRRTSTSGNGASKMQSSSSFTLATRLGRWTPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTH------AAMVGSLSSLPSFSSLLASAQSGRS-----------------------------------GAAANVAGGQGESSGXXXXXXXXXXGAETVGEPQHMDQLFEMLELDLGI 791
            +   G A VGGGGWVRHG++LDGLDTLWE+VL+A AGSQAS+AAS LIV+LHLRLGPKLKSKAA+IGAGFVDTCL +L+ +VSRIR LR                    +T  A  D G            R   G +G R G    +R  RSSSLPP+KG  TR+G      +SR+ SVEGRD  RA ++E     +  GS  VG                SP+AQIASLHRRAGRCILLL++FVT+SKEEENGAA+GTT  +RVSV+VGP+RVPVL+VRLP  ++LG+LR EVARRFRVPA+ LEL ++VRRKG+  TE L+QDGASLE+LGL V G  +N     P    + TS            XXXXXXXXXXXXX    SAG+T  P P VELLAR+  G P   RGD ASG   XXXXXXXXXXX        XXXXXXXXXXXXX                                             P  DLI MDDLL  W +DE PA WPSL  +SEHPGAVTV+Y+ RP  G   +  +  A  S   G  +P    AA    GGG T    L A + + +AETTGT       GP KKLSFRR+  SGNGA+K+ SSSSFTL TRLGRW PR          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        A MVG+L SLPSFSSLLASA                                        G +A  A                   AETVGEPQHMDQLF+MLELDLG+
Sbjct:  994 LGSQGAAVVGGGGWVRHGIDLDGLDTLWEVVLDA-AGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRIRSLRGRAGDAAAPXXXXXXXXXXXDTAVAVADSG------------RLREGASGSRIGSRHFRR--RSSSLPPEKG-STRQGRMMGGASSRSTSVEGRDVTRAMQLEA----EHHGSVVVGSGRGXXXXXXXXXXXXSPQAQIASLHRRAGRCILLLAKFVTKSKEEENGAASGTTR-VRVSVEVGPDRVPVLDVRLPLSTVLGDLRCEVARRFRVPAEFLELGRVVRRKGNATTEVLDQDGASLEALGLVVAGTGSNLPNHLPTPSPSKTSAPAXXXXXXXXXXXXXXXXXXXXXXSNNASAGATNAPPPGVELLARVI-GEPS-FRGDLASGGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADLICMDDLLDSWADDEIPARWPSLTVSSEHPGAVTVVYKDRPG-GRRQQPWSAAAVASLAEGTAMPPTAGAASVGAGGGATAAVPLPA-DGATSAETTGTVATTTTTGPAKKLSFRRSGASGNGAAKLHSSSSFTLPTRLGRWAPRASSSHAEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATMVGALPSLPSFSSLLASAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSATAA-------------------AETVGEPQHMDQLFDMLELDLGM 1778          
BLAST of mRNA_H-canaliculatus_M_contigs8518.1.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 2.770e-75
Identity = 216/409 (52.81%), Postives = 258/409 (63.08%), Query Frame = 0
Query:   58 AIAGHGVAAVGGGGWVRHGMELDGLDTLWEIVLNATAGSQASMAASALIVDLHLRLGPKLKSKAAKIGAGFVDTCLRHLRAAVSRIRVLRASVLETPT--------APEDDGYSGDGEGRNGGPRDERGRAGGRTGGSVRKRWVRSSSLPPDKGRHTRKGSRASRAASVEGRDARRAKEIEEAARRQQQGSGAVGL---YGSRVGDGGAPSSPRAQIASLHRRAGRCILLLSRFVTRSKEEENGAATGTTATLRVSVQVGPERVPVLEVRLPGGSILGELRSEVARRFRVPADSLELLKMVRRKGSMATERLEQDGASLESLGLAVPGQANN------PASPAAATSTVTLQAMDGTAAXXXXXXXXXXXXXXXXXSAGST--PSPSVELLARMAPGAPYRSRGDQASG 447
            A+   G A V GGGWVRHGM+LDGLDTLWE+VL+A AGSQAS+AAS LIV+LHLRLGPKLKSKAA+IGAGFVDTCL +L+ +VSR+R LR    +           + E+D   G                                    D GR    G  +SR+ SVEGRD  RAK++E     + QG   VG                SP+AQI SL+RRAGRCILLL++FVTRSKEEENG A+GTT T+RVSV+VGP+RVPVL+VRLP  ++LG+LR EVARRFRV A+ LEL ++VRRKG+  TE L+QDGASLE+LGL V G  +N        SP+  ++ V   A      XXXXXXXXXXXXXXXXX    T  P P VELLAR+  G P   RGDQASG
Sbjct:   36 ALGSQGAAVVSGGGWVRHGMDLDGLDTLWEVVLDA-AGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRMRSLRGRSADAXXXXXXXXXXSSEEDTAVG----------------------------------VADSGRMM--GGASSRSTSVEGRDVTRAKQLEA----EHQGGVVVGSGRGXXXXXXXXXXXXSPQAQIRSLYRRAGRCILLLAKFVTRSKEEENGDASGTT-TVRVSVEVGPDRVPVLDVRLPLNTVLGDLRCEVARRFRVQAEFLELARVVRRKGNTTTEVLDQDGASLEALGLVVAGTGSNLPNHLPTTSPSKTSAPVAHVAATXXXXXXXXXXXXXXXXXXXXXXXXXTNAPPPGVELLARIF-GEPS-FRGDQASG 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8518.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU88_ECTSI2.820e-10951.51Ubiquitin domain-containing protein (Partial) (Fra... [more]
A0A6H5KTV6_9PHAE2.770e-7552.81USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..720
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..706
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 745..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..644
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8518contigH-canaliculatus_M_contigs8518:71..4735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8518.1.1mRNA_H-canaliculatus_M_contigs8518.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8518 71..4735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8518.1.1 ID=prot_H-canaliculatus_M_contigs8518.1.1|Name=mRNA_H-canaliculatus_M_contigs8518.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=795bp
SQAIRRDVKAAAAAAAAAAAAAVGSAVTATSGGGGDGGAGAGAGMIGGVA
SGATNESAIAGHGVAAVGGGGWVRHGMELDGLDTLWEIVLNATAGSQASM
AASALIVDLHLRLGPKLKSKAAKIGAGFVDTCLRHLRAAVSRIRVLRASV
LETPTAPEDDGYSGDGEGRNGGPRDERGRAGGRTGGSVRKRWVRSSSLPP
DKGRHTRKGSRASRAASVEGRDARRAKEIEEAARRQQQGSGAVGLYGSRV
GDGGAPSSPRAQIASLHRRAGRCILLLSRFVTRSKEEENGAATGTTATLR
VSVQVGPERVPVLEVRLPGGSILGELRSEVARRFRVPADSLELLKMVRRK
GSMATERLEQDGASLESLGLAVPGQANNPASPAAATSTVTLQAMDGTAAA
SSSAPGSAAAAAATTASAGSTPSPSVELLARMAPGAPYRSRGDQASGGGG
SSSARGQKKEDRAFSSITSGGGGAGAGAGGAAAPTAPAKGELGGGAPTAA
GITGQQAGPGSDPSGDLISMDDLLAGWNEDESPAHWPSLMTASEHPGAVT
VLYRGRPATGAPGEEVTVVAAGSGVAGAGLPAADSSCGGGGTGVSALSAI
ESSPTAETTGTALGPKKLSFRRTSTSGNGASKMQSSSSFTLATRLGRWTP
RPAPSQTEDAAAAAAAAAPAMEASAGDDNANRSLSPSPAEMVLVDPSSSA
SSSSGAGGGGGGGGGTHAAMVGSLSSLPSFSSLLASAQSGRSGAAANVAG
GQGESSGGAASGGDVGGGAETVGEPQHMDQLFEMLELDLGIGSGG
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