prot_H-canaliculatus_M_contigs8442.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8442.1.1
Unique Nameprot_H-canaliculatus_M_contigs8442.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length67
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8442.1.1 vs. uniprot
Match: A0A6H5L0F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F7_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.220e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:    1 MLSLCDG------DDVDSYSSGGDVDEVCGLYRSFTATQFIATIVCSVAVVLLAVAFFRPAVGGCASVRTLAF 67
            +L+LCDG      DD+ +     D   +C LYR+FTA Q +ATIVCSV+V+LLA+AFFRP  G CAS RTLAF
Sbjct:   64 VLNLCDGLDDAADDDLLATDEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASTRTLAF 136
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8442.1.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.180e-6
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 0 
Query:   20 DEVCGLYRSFTATQFIATIVCSVAVVLLAVAFFRPAVG-GCASVRTLA 66
            D+VC LY++FTA QFIA +V SV++VL  +A FRPA G  C SV++LA
Sbjct:  124 DDVCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLA 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8442.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0F7_9PHAE3.220e-1456.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK8_9PHAE1.180e-658.33WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8442contigH-canaliculatus_M_contigs8442:1..649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8442.1.1mRNA_H-canaliculatus_M_contigs8442.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8442 1..1403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8442.1.1 ID=prot_H-canaliculatus_M_contigs8442.1.1|Name=mRNA_H-canaliculatus_M_contigs8442.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=67bp
MLSLCDGDDVDSYSSGGDVDEVCGLYRSFTATQFIATIVCSVAVVLLAVA
FFRPAVGGCASVRTLAF
back to top