prot_H-canaliculatus_M_contigs8384.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8384.1.1
Unique Nameprot_H-canaliculatus_M_contigs8384.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length75
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8384.1.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.140e-13
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:   24 QMTRDDRECWKCGVLDDRAGGDVIIVCDTPGCRGASHLQCNDPPLQDVPTGE 75
            Q    DR CWKCG +D R+ GD+II+CD   C GASH+ C DPPLQ VP G+
Sbjct:  536 QAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGD 587
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8384.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE2.140e-1357.69PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..75
NoneNo IPR availableCOILSCoilCoilcoord: 3..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 5..75
e-value: 7.2E-10
score: 40.4
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 21..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8384contigH-canaliculatus_M_contigs8384:4588..4812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8384.1.1mRNA_H-canaliculatus_M_contigs8384.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8384 4588..4812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8384.1.1 ID=prot_H-canaliculatus_M_contigs8384.1.1|Name=mRNA_H-canaliculatus_M_contigs8384.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=75bp
DAAEAAHAEFKEREEEEAEKREEQMTRDDRECWKCGVLDDRAGGDVIIVC
DTPGCRGASHLQCNDPPLQDVPTGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR013083Znf_RING/FYVE/PHD