prot_H-canaliculatus_M_contigs835.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs835.2.1
Unique Nameprot_H-canaliculatus_M_contigs835.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length1410
Homology
BLAST of mRNA_H-canaliculatus_M_contigs835.2.1 vs. uniprot
Match: D7G868_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G868_ECTSI)

HSP 1 Score: 680 bits (1754), Expect = 1.150e-223
Identity = 422/812 (51.97%), Postives = 516/812 (63.55%), Query Frame = 0
Query:  164 LQTQARVWLARRIVHLKRVEVGLTARVSEIADKLASSDDSRTVSAVLGQIDNDYRKYERIIGDFKAREEEMATTFVEKVLERRDADVAGAWTRFIGAVTKFGTDRMERSETRRAHIHPVTRGEEATACEIQDRKLFLLMERYGIPAHARTLPSAYLRAALPMHLKLHGGSLAAGVASHAQLPAAGVKSL--TAGQKRQHMDSLDMSFGDLASSRLKKSGTSVPHVQRSVIN----MVAEGSFKSSITSVGGGPSTRSTTRTTPIGGQHLGS--------VGSSSGRWPSKADGDDLGSGHGGGESSDSEL----RNDSVGDQTHTCNDAGADGAERCVANSRG----ENTGSTTSSRWEHTWDTERTSRGLAGDAGSRFPGSSARQDMPSGMKEVVERLCAAAFLRGHVPDGLMPKGTTPEDAYQRYLNLPPSLAKIRHEQLCTEASRPVASALRSFGYTTLEHLLPVSKLEHLLHQAGAGVDESLAAISLAREIKRRHDISGGSDGSDRGLFSPLSPFSRRGLAGSRRTPDSKEASHRNTRCGG-----------RDANTGT---TSRGKTRSGTAGGEGLLEPKQKITPLRISLGGLESGSTAPGTEKGDGKWDPSRYTTRPEEWIRPPPSVIKRRWDESAKAFVPVNNYRFDELYRRHHQLDPRHXXXXXXXXXXXXXXXRDDDVSTWRVEDERNGDMQQASSVVRARGDSPSTPVP-NSLSGSVNRGDSYAKRMADIMREDYGTFFDGMAQSARELYQFITNDSASWGRVEDPIGTLLCRAAFHVVEHPSPPTKAELALAFERYLASK 938
            +  QARVWLARR VHL++V+VGLT+RVS++ D LASSDDSR++S V GQID DYRKY+RII + +ARE+EMA TFVEKVLERR AD+ GAWTRF+GA T++   R +RS+ RRAH +P +  + A A EI D KL  LMERY IPAHA+ LPSAYLRAALPMHLKL    L +    H Q     V S+  T  QKR+ +++L  S  +   +R    G  +P VQ + ++     ++  +  ++IT+  G  +  S +R +   G+  G+         G   G       G D     GGG S D +     R+ ++  QT        DGAE    +S G    E  G  ++S WE  WD ER  RGL GDAGSRFPGS  RQDMPSG+ E VERLCAAAFLRGHVP GLMPKGTTPE+AY+RYL LPPSLAKIRHEQLCTEAS+PVASALR+ GYT LE LLP+SKLEHL  QAG+G  E+LAA+S+A EIK +  + G  +GS   LFSPLSPFSRR LA SR  P S + S R+ R  G           +D + G+   TSR              E K+K   LRIS+ GLE  S A G E+G+G+WDPSRYT+RPEEWIRPPPSVIK+RWD+SAKAFVPVNNY FD LYRRHH LD                  R      W  E +R+G M Q     R  G   S+P   + LSG+   G  +AKR+  IM+E+YGTFFDGM QSA ELYQ + NDS SWG V+D IG LL RAAF +VEHPSP T+AELA+A ER L +K
Sbjct:   37 IDKQARVWLARRAVHLQKVKVGLTSRVSKLTDMLASSDDSRSISTVFGQIDRDYRKYDRIIAEMQAREDEMAVTFVEKVLERRAADIGGAWTRFVGAATEYSAGRRKRSDARRAHPYPASGDKRAAASEIHDEKLMRLMERYEIPAHAKALPSAYLRAALPMHLKLRSERLVSVEKGHTQ----NVVSIDGTQRQKRRRVNTLLPSSNEEVGARQDGGGVFMPAVQCNSLDEKMSSISPATAAATITTAAG--AINSPSRFSSFEGKRSGAHSCERRTAAGGYDGAGGIGCRGSD-----GGGASGDEDFGFVERHQTLTRQTSR---HAGDGAENVGLDSAGSQRWEGGGGVSTSGWESVWDAEREKRGLTGDAGSRFPGSLVRQDMPSGLAETVERLCAAAFLRGHVPHGLMPKGTTPEEAYRRYLELPPSLAKIRHEQLCTEASQPVASALRARGYTVLEQLLPLSKLEHLFSQAGSGASETLAAVSIASEIKPKRGVGGCGNGSGDDLFSPLSPFSRRCLARSRAAPISTQRSPRSRRREGLDDCVSDESVRKDGSRGSGRVTSRSXXXXXXXXXXXSGEAKKKGL-LRISMQGLELPSRAAGMEQGNGRWDPSRYTSRPEEWIRPPPSVIKQRWDDSAKAFVPVNNYTFDGLYRRHHPLDHCCDEDHRHVDNERDMVTRGGGDDNWCSEGKRDGAMGQEEHPSRPGGLYRSSPTAADPLSGAAG-GSCFAKRVESIMQEEYGTFFDGMTQSATELYQHMINDSGSWGSVDDSIGILLRRAAFFIVEHPSPATRAELAVARERDLVAK 832          
BLAST of mRNA_H-canaliculatus_M_contigs835.2.1 vs. uniprot
Match: A0A836CBX2_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBX2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.870e-16
Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 0
Query:  527 QDMPSGMKEVVERLCAAAFLRGHVPDGLMPKGTTPEDAYQRYLNLPPSLAKIRHEQLCTEASRPVASALRSFGYTTLEHLLPVSKLEHLLHQAGAGVDESLAAISLAREIKR 638
            +D+P G+ +   RL  AA LR  VP   MP GT+ E A++ YL LPPSLAKI+HEQ   +A+RP A+AL + G+  + HL+P+SK+  ++ + G      LAA  LA E++R
Sbjct: 1332 RDIPGGLHDCTGRLLRAALLRSFVPS-TMPAGTSAEIAFRHYLALPPSLAKIKHEQDAAKAARPHAAALSAAGFHLIGHLMPISKMARVMQELGVPAAAILAAQDLAEELRR 1442          
BLAST of mRNA_H-canaliculatus_M_contigs835.2.1 vs. uniprot
Match: A0A7S4E6V7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.320e-7
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  522 GSSARQDMPSGMKEVVERLCAAAFLRGHVPDGLMPKGTTPEDAYQRYLNLPPSLAKIRHEQLCTEASRPVASALRSFGYTTLEHLLP 608
            G  A  D+P G+ + +E L  AA LR HVP+   P+GTTP++A++ Y +LPPSL K +HE    +      +ALR+ G+ T+  L P
Sbjct: 1096 GLEALLDVPRGLDDALEPLLRAAALRAHVPEEF-PEGTTPQEAFEVYRSLPPSLIKSKHEMDAHKRVPRWIAALRASGFDTVRSLCP 1181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs835.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G868_ECTSI1.150e-22351.97C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CBX2_9STRA1.870e-1644.64C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S4E6V7_9STRA4.320e-741.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.190coord: 95..140
e-value: 3.8E-6
score: 28.6
NoneNo IPR availableGENE3D1.20.5.190coord: 36..92
e-value: 1.9E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1097..1150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1097..1133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..826
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1250..1291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1247..1307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 668..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1292..1306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..701
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 69..86
e-value: 0.048
score: 13.5
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 70..96
score: 8.2789
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 121..150
score: 8.132501
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 35..64
score: 7.4554
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1309..1339
score: 10.034397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs835contigH-canaliculatus_M_contigs835:2279..11346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs835.2.1mRNA_H-canaliculatus_M_contigs835.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs835 2279..11346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs835.2.1 ID=prot_H-canaliculatus_M_contigs835.2.1|Name=mRNA_H-canaliculatus_M_contigs835.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=1410bp
RSQTAEPLLRAVQEDNARHIATHRGEVAAIVQYVYSLSASRLQPFIRGAL
TRRRLPDALREMFSYAFLCAAVEIQRVFRGCIARRRRQKALVSLASLVCL
QARIRGVLLRQRVAKKWDALLDRQASEIQRVFRGHLSRGAANAALKEKTR
AQSANLQGWASLILQTQARVWLARRIVHLKRVEVGLTARVSEIADKLASS
DDSRTVSAVLGQIDNDYRKYERIIGDFKAREEEMATTFVEKVLERRDADV
AGAWTRFIGAVTKFGTDRMERSETRRAHIHPVTRGEEATACEIQDRKLFL
LMERYGIPAHARTLPSAYLRAALPMHLKLHGGSLAAGVASHAQLPAAGVK
SLTAGQKRQHMDSLDMSFGDLASSRLKKSGTSVPHVQRSVINMVAEGSFK
SSITSVGGGPSTRSTTRTTPIGGQHLGSVGSSSGRWPSKADGDDLGSGHG
GGESSDSELRNDSVGDQTHTCNDAGADGAERCVANSRGENTGSTTSSRWE
HTWDTERTSRGLAGDAGSRFPGSSARQDMPSGMKEVVERLCAAAFLRGHV
PDGLMPKGTTPEDAYQRYLNLPPSLAKIRHEQLCTEASRPVASALRSFGY
TTLEHLLPVSKLEHLLHQAGAGVDESLAAISLAREIKRRHDISGGSDGSD
RGLFSPLSPFSRRGLAGSRRTPDSKEASHRNTRCGGRDANTGTTSRGKTR
SGTAGGEGLLEPKQKITPLRISLGGLESGSTAPGTEKGDGKWDPSRYTTR
PEEWIRPPPSVIKRRWDESAKAFVPVNNYRFDELYRRHHQLDPRHHRDDD
QFDDERNNSTRDDDVSTWRVEDERNGDMQQASSVVRARGDSPSTPVPNSL
SGSVNRGDSYAKRMADIMREDYGTFFDGMAQSARELYQFITNDSASWGRV
EDPIGTLLCRAAFHVVEHPSPPTKAELALAFERYLASKGLGGRRNNLARP
IALAGKFNDSGLEKELAQAALACEHVPMGPAAFREFVGQLDATSGNRSSS
STPSTLNTARTGRLYGAAPVDPCRTLMERRLQAAATLANPFKVRLEADGV
SDVRGLARIPARAWGLPPCLVEEIERMLGVLVARTCALEHFRAHGGPKRD
RVPDENTKPKRGDSSRKSALVRGVPRRQDKNPGGARRLQQQSFEFDPRFQ
RSPLDPFGRPGRLERIRPCLGARQETDGGRRPDGCQLSTDEDDLPPGMWE
LATAAEDPIRSDVVETSGSEREMEEAIDASLLSVPVESMVLGAQSDLRAE
DLPVDSRAAQEPVGHRKPRSQPEQAQKPSHPTAKRRLVSDGKKNSSPATE
GARPSSTRFTCRVLPRCKAVFSRASVLGTHERSHASAPEYHRLRRAPQLF
RDRPPAPSEGAGAAAVKFRLRTTLPPSIRRELELLEGEEALGTHRDLQAR
SDLPGAVAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000048IQ_motif_EF-hand-BS