prot_H-canaliculatus_M_contigs8236.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8236.1.1
Unique Nameprot_H-canaliculatus_M_contigs8236.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length589
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8236.1.1 vs. uniprot
Match: D8LQP4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.570e-67
Identity = 225/635 (35.43%), Postives = 294/635 (46.30%), Query Frame = 0
Query:    1 IVGEVASFLEPRAVLSYSMTCTTADGALWQDECWRGLFDVRHLS--IVGADTFPSDGTNSH----DDRDDAPIRRAVIAYGCLLCQALRLFDMVIADRGTTKAVINGPARTAVAVASLQALADITVNASDPVGRKAFSNIRTGQLLFSILAREHSSAVMQELTCAVLANLFCQADTTPGVCCAGQPAHLGSSETIGFAARNRRQGRNKGSAIQTLTGLCSSTRPSPSSWITPKHSGGGGMRPVENIPGRQASRALINLLLPQFQVRQQQGMLRKDLANNHAATIKRRRSLPDQPPPQNDLQRETNP-----------------TERPPVAHPVPASDDRCEGRSQRVKPSSTA--AAWEEDTEDEASRSTGPAAPCTSRIRGPERGRAFEGGVPLP--PVTVSVTRRRLVHLSTTRTAVEDGRTTTTMVVVSKDCPTSVERVAETGVE---SAARLTA-GRTPKVAEARK------SFPKAPATSKPSILLQPSSSRLPATTKIRHAAVNNGGPSHNELRPQHSEPLPLFTTETNFAVNTGQHEAATPTGSDRQP------ETCLSV---DGGCQEEEWEAFYFYHGGGMKDKFTITLSSATSRGR-FVGQGTDKLGPFMMEGTPLFDGGGGETW 588
            ++G V SFLEPR++LSY + C   D  L QDECW G+F V HL   ++G       G   H    ++   AP+R AVIA G  L  ALRLFD V+ D G +KAVINGP                                    +L SI+AREH +A++Q+L CA LANLFC+ +   G   A QP  L      G AA  +  GRNKG A+Q LT LCSSTRPSPSSW  PK  GGGGMRPVEN+PGRQASRALINLLLP+ QV QQ  +       ++  +  RR SLP    PQN      +                                 +C   S+R    + A   AW+E+T+D     +G +    +  RG E    F+        PV V       VHL       +          VS   P ++ R A T V    +A+  TA    P++ E  K      S PKAP  +  + L       +P    +   A +       + R + +E +   T +       G  +A   TG +  P       TCL++   +   +EE WEAFYFY  GG+KD F + L +  + G  F G G DKLG F+MEG+PL D G GETW
Sbjct:  158 VIGGVVSFLEPRSILSYGLVCKVVDDVLRQDECWGGIFRVLHLQSDVIGVPHGSLGGAEHHRASQNEEIKAPMRTAVIARGRSLSLALRLFDAVVLDGGVSKAVINGP------------------------------------VLLSIIAREHGNAMLQDLACAALANLFCEPE---GSGSAEQPLAL--DMPCGSAAA-KMLGRNKGPAVQALTALCSSTRPSPSSWSAPKV-GGGGMRPVENLPGRQASRALINLLLPKCQVLQQGTLRGGGFGADYGCSNDRRHSLPSIV-PQNAASAGQSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAGFSTKCGSCSRRTSAPAAAPVVAWQEETKDGMVAVSGRS--IATSTRGEETPSYFKHARAPDERPVGVDAESGGPVHLPIIGGLEDHDAEPVLSKSVSTQGPGAM-RTAGTPVRQQATASPTTADAAAPRLDEKAKAGGLASSTPKAPQETPTTPL------SIPPAAALELGAASASRFPETQRRYETTEAVQTKTADD------GCRDARGSTGPEPPPAPVSPCNTCLALPRREQRPEEEVWEAFYFYQRGGIKDNFNVRLRTFRAPGGGFSGHGVDKLGHFVMEGSPLLDRGAGETW 733          
BLAST of mRNA_H-canaliculatus_M_contigs8236.1.1 vs. uniprot
Match: A0A6H5KJ17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ17_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.690e-24
Identity = 127/389 (32.65%), Postives = 172/389 (44.22%), Query Frame = 0
Query:  223 WITPKHSGGGGMRPVENIPGRQASRALINLLLPQFQVRQQQGMLRKDLANNHAATIKRRRSLPDQPPPQNDLQRET----NPTERPPVAHPVPASDDRCEGRSQRVKPSSTAAA---WEEDTEDEASRSTGPAAPCTSRIRGPERGRAFEGGVPLP--PVTVSVTRRRLVHLSTTRTAVEDGRTTTTMVVVSKDCPTSVERVAETGVESAARLT----AGRTPKVAEARK------SFPKAPATSKPSILLQPSSSRLPATTKIRHAAVNNGGPSHNELRPQHSEPLPLFTTETNFAVNTGQHEAATPTGSDRQPETCLSV---DGGCQEEEWEAFYFYHGGGMKDKFTITL-SSATSRGRFVGQGTDKLGPFMMEGTPLFDGGGGETW 588
            +  P   G GGMRPVEN+PGRQASRALINLLLP++QV QQ  +     A ++  +  RR SLP   P       ++    N T     +        +C    +R    + AAA   W+E+T+D     +G +    + IRG E     +        PV V       V L       +          VS   P ++ R A T +   A  +    A   P+  E  K      S PKAP  +  + L     S LPA      AA  +  P   + R +++E +   T +  F    G      P        TCL+    +   +EE WEAFYFY  GG+KD F + L +S  S G F G+G DKLG F+MEG+PL D G GETW
Sbjct:   39 YCAPVQVGEGGMRPVENLPGRQASRALINLLLPKYQVLQQGTLRGGGFAADYGCSNDRRHSLPVTVPQNAASMGQSSGPKNATAAGQCSGTAAGFSTKCGSCCRRTSAPAAAAAVVAWQEETKDGMVAVSGRS--IATSIRGEEAASDVKHARAPDERPVDVDAESGGRVQLPIIGGLEDHDAVPILNKTVSTQGPEAM-RTAGTPLRQQATASPTTAAAAAPRPDEKEKAGRLASSTPKAPQETPTTPL-----SILPAAALKLGAASASRFPE-TQRRCENTEAVQTKTVDDGFRDARGSMGPEPPPAPGSPSNTCLAPPRREQRPEEEVWEAFYFYQRGGIKDNFNVRLRTSMASAGGFSGRGVDKLGHFVMEGSPLLDRGAGETW 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8236.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQP4_ECTSI1.570e-6735.43F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KJ17_9PHAE3.690e-2432.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8236contigH-canaliculatus_M_contigs8236:457..5031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8236.1.1mRNA_H-canaliculatus_M_contigs8236.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8236 457..5031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8236.1.1 ID=prot_H-canaliculatus_M_contigs8236.1.1|Name=mRNA_H-canaliculatus_M_contigs8236.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=589bp
IVGEVASFLEPRAVLSYSMTCTTADGALWQDECWRGLFDVRHLSIVGADT
FPSDGTNSHDDRDDAPIRRAVIAYGCLLCQALRLFDMVIADRGTTKAVIN
GPARTAVAVASLQALADITVNASDPVGRKAFSNIRTGQLLFSILAREHSS
AVMQELTCAVLANLFCQADTTPGVCCAGQPAHLGSSETIGFAARNRRQGR
NKGSAIQTLTGLCSSTRPSPSSWITPKHSGGGGMRPVENIPGRQASRALI
NLLLPQFQVRQQQGMLRKDLANNHAATIKRRRSLPDQPPPQNDLQRETNP
TERPPVAHPVPASDDRCEGRSQRVKPSSTAAAWEEDTEDEASRSTGPAAP
CTSRIRGPERGRAFEGGVPLPPVTVSVTRRRLVHLSTTRTAVEDGRTTTT
MVVVSKDCPTSVERVAETGVESAARLTAGRTPKVAEARKSFPKAPATSKP
SILLQPSSSRLPATTKIRHAAVNNGGPSHNELRPQHSEPLPLFTTETNFA
VNTGQHEAATPTGSDRQPETCLSVDGGCQEEEWEAFYFYHGGGMKDKFTI
TLSSATSRGRFVGQGTDKLGPFMMEGTPLFDGGGGETW*
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