prot_H-canaliculatus_M_contigs8192.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8192.2.1
Unique Nameprot_H-canaliculatus_M_contigs8192.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length35
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8192.2.1 vs. uniprot
Match: A0A6H5L606_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L606_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.650e-7
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:    1 MTGRMNSVVRGQERPSTRFAMRLVARGEGKGL 32
            MTGRM SV RGQERPSTRFAMRLVARGE  GL
Sbjct:  521 MTGRMTSVERGQERPSTRFAMRLVARGERIGL 552
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8192.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L606_9PHAE1.650e-787.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8192contigH-canaliculatus_M_contigs8192:4371..4475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8192.2.1mRNA_H-canaliculatus_M_contigs8192.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8192 3708..4544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8192.2.1 ID=prot_H-canaliculatus_M_contigs8192.2.1|Name=mRNA_H-canaliculatus_M_contigs8192.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=35bp
MTGRMNSVVRGQERPSTRFAMRLVARGEGKGLAS*
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