prot_H-canaliculatus_M_contigs8191.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs8191.1.1
Unique Name	prot_H-canaliculatus_M_contigs8191.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	730

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs8191.1.1 vs. uniprot
Match: D8LQ04_ECTSI (USP7_ICP0_bdg domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ04_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.690e-50
Identity = 219/414 (52.90%), Postives = 242/414 (58.45%), Query Frame = 0

Query:    1 GDNQPEFVFVGKAMAHMTDRGCELAPIAKNLAHLPQTLNLEVFEQIAPEEVRRFSGEKTVAEAGLSHGSVLLFRSAQQDSASWPPHGAKQGQIPQQQAVAAPVAEVSACVPFNAAAAXXXXXXXX-----------------------AHAAVTGTPKPLVPSATSGVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKSAPGWDGGHMSAAAAATAAGVVGAGGTSKVERTVVMDAEAQKRATCLALYQIQETARQHQVKEAARAVAKKLAAEAALAAAKEQIKRTGAVLDGGAGLSAAAAKTVEGXXXXXXXXXXXXXXXXXXAMKAPATPVLTPAEXXXXXXXXXXXXXXXAMEHAQSRVPHTYRTISITEALREGAPPTLAVPMPPA----SAMSTASPVAQTAA 387
            G N+PEFVFVGKAMAH TDRGCEL PIA +LAHLP+ LNLEVFEQI PEEVRRF+G+KTVAEAGLSHGS+LLFRSAQQ+                                      XXXXXXXX                       AHA VT  PKP  P A SG    A   XXXXXXXXXXXXXXXXXXXXXX     EKSAPGWDGG          A VVG   +   E  VVMD  AQ+RATCLAL+Q+QE  RQHQ KEAARAVAKKLAAEA L +AKE++K+   +                 XXXXXXXXXXXXXXXXXX         LTPA+       X       A+EHAQS+    YRT+SI EALREGAPP ++ P PPA    SA +  S VAQ AA
Sbjct:  144 GSNEPEFVFVGKAMAHRTDRGCELVPIALSLAHLPEGLNLEVFEQITPEEVRRFNGDKTVAEAGLSHGSILLFRSAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAHATVTHAPKPAFPPARSGRIEDAVAAXXXXXXXXXXXXXXXXXXXXXXK---GEKSAPGWDGGP---------AAVVGRVASPPGEIPVVMDPAAQRRATCLALFQVQENQRQHQAKEAARAVAKKLAAEAVLTSAKEKLKK---IATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFLTPAQQAEVAAAXRMAAHAAAVEHAQSKA-QAYRTVSIMEALREGAPP-MSTP-PPAQLQPSAPAMGSVVAQQAA 539

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BLAST of mRNA_H-canaliculatus_M_contigs8191.1.1 vs. uniprot
Match: A0A6H5LAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN8_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 8.060e-29
Identity = 191/394 (48.48%), Postives = 205/394 (52.03%), Query Frame = 0

Query:   14 MAHMTDRGCELAPIAKNLAHLPQTLNLEVFEQIAPEEVRRFSGEKTVAEAGLSHGSVLLFRSAQQDSASWP---------------------------------PHGAKQGQIPQQQAVAAPVAEVSACVPFNAAAAXXXXXXXXAHAAVTGTPKPLVPSATSGVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKSAPGWDGGHMSAAAAATAAGVVGAGGTSKVERTVVMDAEAQKRATCLALYQIQETARQHQVKEAARAVAKKLAAEAALAAAKEQIKRTGAVLDGGAGLSAAAAKTVEGXXXXXXXXXXXXXXXXXXAMKAPATP-----VLTPAEXXXXXXXXXXXXXXXAMEHAQSRVPHTYRTISITEALREGAPPTLAVP 369
            MAH TDRGCEL PIA +LAHLP+ L LEVFEQI PEEVRRFSG+KTVAEAGLSHGSVLLFRSAQQ++   P                                                                  XXXXXXXX HA VT  PKP  P          XXXXXXXXXXXXXXXXXXXXXXXXXXXX  EKSAPGWDGG          A VVG   +   E  VVMD  AQ+RATCLAL+Q+QE  RQ + KEAARAVAK                                      XXXXXXXXXXXXXXXXXX             VLTPA+     XXX       A+EHAQS+    YRT+SI EALREGAPPT   P
Sbjct:    1 MAHRTDRGCELVPIALSLAHLPEGLKLEVFEQITPEEVRRFSGDKTVAEAGLSHGSVLLFRSAQQETTPSPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATVTHAPKPAFPXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEKSAPGWDGGP---------AAVVGRAASPSGEIPVVMDPAAQRRATCLALFQVQENQRQQRAKEAARAVAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTPAQQAEVAXXXRMAAHAAAVEHAQSKA-QAYRTVSIMEALREGAPPTSTPP 380

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs8191.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs8191.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQ04_ECTSI	1.690e-50	52.90	USP7_ICP0_bdg domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5LAN8_9PHAE	8.060e-29	48.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..265
None	No IPR available	GENE3D	3.10.20.90		coord: 2..90 e-value: 1.4E-5 score: 27.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..686
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..523
IPR024729	Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain	PFAM	PF12436	USP7_ICP0_bdg	coord: 7..89 e-value: 9.3E-7 score: 28.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs8191	contig	H-canaliculatus_M_contigs8191:265..4912 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs8191.1.1	mRNA_H-canaliculatus_M_contigs8191.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs8191 265..4912 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs8191.1.1 ID=prot_H-canaliculatus_M_contigs8191.1.1|Name=mRNA_H-canaliculatus_M_contigs8191.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=730bp
GDNQPEFVFVGKAMAHMTDRGCELAPIAKNLAHLPQTLNLEVFEQIAPEE
VRRFSGEKTVAEAGLSHGSVLLFRSAQQDSASWPPHGAKQGQIPQQQAVA
APVAEVSACVPFNAAAAAAAAAAMAAHAAVTGTPKPLVPSATSGVAAAAA
VSASTSAATAAATSAAATSAAPTASGASAEKSAPGWDGGHMSAAAAATAA
GVVGAGGTSKVERTVVMDAEAQKRATCLALYQIQETARQHQVKEAARAVA
KKLAAEAALAAAKEQIKRTGAVLDGGAGLSAAAAKTVEGEGEKAVAAAEA
AAAAAAAAMKAPATPVLTPAEKAEVAAAAKMAAHAAAMEHAQSRVPHTYR
TISITEALREGAPPTLAVPMPPASAMSTASPVAQTAARQVTAQAGTAVPV
GAAAKVEVTTPVVSVAPAPSVKDPGSVMVAAPVSTTSSSSPFSSTAAGAA
ANVDNVEHGGDTESGIELEVDVDGRGDALSNAEVPTDTLTDTPASGADSS
KKKGGSQEGSAPKRTTPSGNVQDNRGIAAPAAPAPAATAADGINDVEAID
TIGNPTPPPISATRASKAAAAAVGSSEDDDGLEHGVVAAVVPVEMHRRSS
RKAAAVAAQQIQTTARAGTRGGGGGGGTDAAAYRSPRGGSDDAGGGGQKR
RAEEGELSGTGTVSKKSSRIDEGGGSAMSAVPAASPVPSDLSAFIAQLMH
VPGFTMEKCMELTRSKERAEVRTCLFPGQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024729	USP7_ICP0-binding_dom