prot_H-canaliculatus_M_contigs7958.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs7958.1.1
Unique Name	prot_H-canaliculatus_M_contigs7958.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	315

Homology

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: D7G2P6_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2P6_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 9.790e-145
Identity = 202/231 (87.45%), Postives = 219/231 (94.81%), Query Frame = 0

Query:    1 MNRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPKEDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 231
            MNRRNTPRGQMSMGKGGPAIQMM+GAMRAMF+PPPPLEFK+SVCKRKPP VEG+AAMLKGK  A+LFEKG PPPPEKFETPRQ+HAR+A AKKK + E LK++IS+WNPK+DPK KGDAYKTLFIAKISYDTTEKKLRREFEQ+G I S+RMVQD+DGKPRGYAFVEYENEDDMR+AYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK+RPKKG EAEWRE
Sbjct:    1 MNRRNTPRGQMSMGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVPPPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDEDGKPRGYAFVEYENEDDMRVAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKERPKKGHEAEWRE 231

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: H6WBA2_VAULI (RRM domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA2_VAULI)

HSP 1 Score: 265 bits (678), Expect = 2.500e-84
Identity = 134/227 (59.03%), Postives = 167/227 (73.57%), Query Frame = 0

Query:    1 MNRRNTPRGQMSMGKG-GPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPKEDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQE 226
            MNR NTPRG MS G+  GPA+ M+   ++ MFDP PPL +K  + KR  P V G+           +FEK  PPP   +ETP+QRHARL +AK +     ++  I +WNPK+DP A GDAYKTLF+A +SYDT+EKKLRREFEQYG I  +R+V D + +PRGYAF+EYE E+DM +AYK+ DGRK+D RR+LVDVERGRTVRNW PRRFGGGLG+SRK +PKKG+E
Sbjct:    1 MNRLNTPRGYMSQGRNSGPALGMLPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYK------DVFEKIPPPPIIPYETPKQRHARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDLEDQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESRKTKPKKGEE 221

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A7S2Y0A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A0_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.820e-76
Identity = 127/218 (58.26%), Postives = 159/218 (72.94%), Query Frame = 0

Query:    3 RRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPKEDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDR 220
            RR TP+G MS    GPAI  +   ++AMFDP PP+E K  + KRK P++ G+A+ +       LFEK  PPP + +ETP+QR AR+ DA  KA  E+L     +++P  +P A  DAYKTLFI+++SYDTTEKKLRREFEQYGPI +LR++ D + KPRGYAF+EY+ E DMR+AYKR DG KIDGRRVLVDVERGRTVR W PRR GGGLG +RK +
Sbjct:    4 RRMTPKGMMSGNGSGPAIAHLPPGLKAMFDPRPPMEHKPPIIKRKMPSLAGMASYV------DLFEKTEPPPRQIYETPKQRQARVRDATMKANNEALALYAQEFDPHLNPHATEDAYKTLFISRLSYDTTEKKLRREFEQYGPIRNLRIILDLNDKPRGYAFIEYDRESDMRMAYKRADGCKIDGRRVLVDVERGRTVRGWCPRRLGGGLGGTRKSK 215

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A5D6XVV7_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVV7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.750e-69
Identity = 123/232 (53.02%), Postives = 160/232 (68.97%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARL-ADAKKKAEAESLKERISQWNPKE-DPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 231
            +R+ TP+GQMS    GPAI  +   ++A+F+P  PLEF+  + KRK P   GIAA       A  FE   PPP E  ETP++R  R+ A+   KA+AE L  +  +W+P   D +   DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+   R+V+D DGK RGY FVEYENE D++ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK  P    +   RE
Sbjct:   13 HRKMTPKGQMSNSGMGPAISHLPVHLKALFEPNAPLEFRPKLVKRKMPPYSGIAAF------AEQFEAEAPPPREVSETPKERRERVRAERMAKADAEMLANK-EKWDPNAPDERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKRARLVEDPDGKSRGYGFVEYENESDLKAAYKLADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRKGGPAVNVKYSGRE 237

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A4D9D1Y9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y9_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.170e-68
Identity = 119/213 (55.87%), Postives = 147/213 (69.01%), Query Frame = 0

Query:    6 TPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPKEDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
            TP+GQMS     PAI  +   MRAMF+P PP+EF     K  P    GI+        A LFE   PP  E+F + ++R A    A  K  AE ++  +  W+PK+D KA  D YKTL +A++SYDTTEKKLRREFEQYGPI S+R+V D DGKPRGYAF+E+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W+PRR GGGLG +RK
Sbjct:   33 TPKGQMSGSNMPPAITGLPQNMRAMFEPRPPVEFLRLAPKPPPRPYTGISQY------AGLFETDEPPARERFLSYKERKAAERAAFMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVTDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 239

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A8K1CMI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMI4_PYTOL)

HSP 1 Score: 226 bits (575), Expect = 1.230e-68
Identity = 115/231 (49.78%), Postives = 157/231 (67.97%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPKE-DPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 231
            +R+ TP+GQMS    GPAI  +   ++A+F+P PPLE    + KRK P   G+         A  FE   PPP E  ETP++R  R+   K +A    L+  + +W+P+  D +   DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+  +R+++D++GK RGYAFVEYE E DM++AYK+ DG+KIDGRRV+VDVERGRTVR W PR+FGGG+G++RK  P    +   RE
Sbjct:    4 HRKMTPKGQMSSSGMGPAIVHLPPHLKALFEPNPPLEHLPQLTKRKMPPYSGLTEF------AETFETAQPPPREVSETPKERRERVRKEKVEAHEAQLQANLEKWDPQAADERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKIRLIEDEEGKSRGYAFVEYEKESDMKVAYKQADGKKIDGRRVVVDVERGRTVREWKPRKFGGGIGETRKGGPDVNVKYSGRE 228

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A6G0M502_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M502_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.260e-68
Identity = 115/218 (52.75%), Postives = 152/218 (69.72%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPK-EDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   ++ MF+P  PL+    + KRK P   G+AA L        FE  TPPP    ETP++R  R    K  A    ++E  ++W+P  EDP+   DAYKTLF+ +ISY+TTE++LR EFEQYGP+ S+R+V+D +GK RGY FVEYE E+DM+ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A6A3TRP9_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TRP9_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.480e-68
Identity = 115/218 (52.75%), Postives = 152/218 (69.72%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPK-EDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   ++ MF+P  PL+    + KRK P   G+AA L        FE  TPPP    ETP++R  R    K  A    ++E  ++W+P  EDP+   DAYKTLF+ +ISY+TTE++LR EFEQYGP+ S+R+V+D +GK RGY FVEYE E+DM+ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A225VLV9_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLV9_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.780e-67
Identity = 116/218 (53.21%), Postives = 152/218 (69.72%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPK-EDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   ++ +F+P  PL+    + KRK P   G+AA       A +FEK TPPP E  ETP++R  R    K  A    ++E   +W+P  EDP+   DAYKTLF+ +ISY+TTE++LR EFEQYG + S+R+V+D +GK RGY FVEYE E DM+ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+GD+RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVLFEPNAPLDHLPRLVKRKMPPYSGLAAF------ADVFEKETPPPREVQETPKERRDRRRVEKMAAVDTKMQEDRVKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGAVKSVRLVEDPEGKSRGYGFVEYEKETDMKSAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGDTRK 218

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Match: A0A3R7JSM4_9STRA (RRM domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JSM4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.430e-66
Identity = 111/218 (50.92%), Postives = 152/218 (69.72%), Query Frame = 0

Query:    2 NRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPAVEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESLKERISQWNPK-EDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSLRMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   ++ +F+P  PL+    + KRK P   G+AA +        FE   PPP E  ETP++R  R+   K ++    ++E  ++W P  EDP+   DAYKTLF+ +ISY+TTE++LR EFEQYGP+ S+R+V+D +GK RGY FVEYE E D++ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVLFEPNAPLDHLPRLVKRKMPPYTGLAAFM------DTFEMENPPPREIQETPKERRERVRKEKMESTDAKMQEDRAKWEPNAEDPRKTEDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDTEGKSRGYGFVEYEKETDLKSAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs7958.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G2P6_ECTSI	9.790e-145	87.45	RRM domain-containing protein n=2 Tax=Ectocarpus T...	[more]
H6WBA2_VAULI	2.500e-84	59.03	RRM domain-containing protein n=1 Tax=Vaucheria li...	[more]
A0A7S2Y0A0_9STRA	2.820e-76	58.26	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A5D6XVV7_9STRA	6.750e-69	53.02	RRM domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A4D9D1Y9_9STRA	1.170e-68	55.87	RRM domain-containing protein n=1 Tax=Nannochlorop...	[more]
A0A8K1CMI4_PYTOL	1.230e-68	49.78	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A6G0M502_9STRA	1.260e-68	52.75	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A6A3TRP9_9STRA	1.480e-68	52.75	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A225VLV9_9STRA	5.780e-67	53.21	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A3R7JSM4_9STRA	1.430e-66	50.92	RRM domain-containing protein n=3 Tax=Phytophthora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..298
None	No IPR available	PANTHER	PTHR13952:SF5	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA	coord: 27..299
None	No IPR available	PANTHER	PTHR13952	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD	coord: 27..299
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 122..194 e-value: 4.1E-24 score: 96.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 123..191 e-value: 2.0E-19 score: 69.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 121..198 score: 19.041388
IPR022023	U1 small nuclear ribonucleoprotein of 70kDa N-terminal	PFAM	PF12220	U1snRNP70_N	coord: 28..112 e-value: 1.7E-13 score: 51.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 108..232 e-value: 2.9E-34 score: 119.9
IPR034143	snRNP70, RNA recognition motif	CDD	cd12236	RRM_snRNP70	coord: 120..209 e-value: 1.68925E-51 score: 163.186
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 106..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs7958	contig	H-canaliculatus_M_contigs7958:50..3820 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs7958.1.1	mRNA_H-canaliculatus_M_contigs7958.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs7958 50..3820 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs7958.1.1 ID=prot_H-canaliculatus_M_contigs7958.1.1|Name=mRNA_H-canaliculatus_M_contigs7958.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=315bp
MNRRNTPRGQMSMGKGGPAIQMMDGAMRAMFDPPPPLEFKESVCKRKPPA
VEGIAAMLKGKSGASLFEKGTPPPPEKFETPRQRHARLADAKKKAEAESL
KERISQWNPKEDPKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPISSL
RMVQDDDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRT
VRNWLPRRFGGGLGDSRKDRPKKGQEAEWRERERLEAEAKEAEREAKREK
ERQEERARRDKEREEREEKEKSRGRDAENGSGGKDRGGGGDGKRADSRER
GRWGEFIFIFVVVF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR034143	snRNP70_RRM
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR022023	U1snRNP70_N
IPR000504	RRM_dom