mRNA_H-canaliculatus_M_contigs9965.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9965.1.2
Unique NamemRNA_H-canaliculatus_M_contigs9965.1.2
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ5_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 5.050e-136
Identity = 212/252 (84.13%), Postives = 224/252 (88.89%), Query Frame = 2
Query:   62 MLLRSIRPRALMRLGGTVPAAAPTSPAVASGNGFRRTTRSYSSTRRAEMNYLPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKEGVGSGNVE 817
            MLL SI  RAL  L G  PAAA  S         R   R+YSSTRR EMNYLPMVLES+PRGERAYDIYSRLLRERIIC+HGPVTEQM+SLVTAQLL+LESE+P KPINMYINSPGG+VTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSP+MRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLN+IYAEHTG++V EIEKVMDRDFYMTAQEAIEFGVVDKIL KRPKEG GSG V+
Sbjct:    1 MLLTSIHARALASLAGAGPAAAKNS---------RIAFRAYSSTRRVEMNYLPMVLESTPRGERAYDIYSRLLRERIICMHGPVTEQMTSLVTAQLLFLESENPDKPINMYINSPGGVVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNDIYAEHTGREVGEIEKVMDRDFYMTAQEAIEFGVVDKILKKRPKEGEGSGTVQ 243          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X3_9STRA)

HSP 1 Score: 295 bits (756), Expect = 7.010e-94
Identity = 152/211 (72.04%), Postives = 180/211 (85.31%), Query Frame = 2
Query:  158 GFRRTTRSYSSTRRAEMNYLPMVLESSP-RGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRP 787
            G R+  RS SST       +PMV+ES+P +GER +DIYSRLLRERI+ L GPV+E+M+S+VTAQLL+LESEDP+KPI+MYINSPGG+VTAGLAIYDTMQYV P+ICT+CMGQAASM SLLLTAG P MR+ILPNA+VMLHQPSGGA+GMAADIAI+AEEI++TR+ LN +Y+ HTGQ V EIEKVMDRD +  AQ+AI FGVVD I  KRP
Sbjct:   13 GARQLHRSISSTA-VSRALVPMVVESTPGKGERGFDIYSRLLRERIVFLQGPVSEEMASVVTAQLLFLESEDPEKPISMYINSPGGLVTAGLAIYDTMQYVGPKICTVCMGQAASMASLLLTAGEPGMRYILPNARVMLHQPSGGAHGMAADIAIVAEEILRTRSVLNNLYSHHTGQPVSEIEKVMDRDTHYDAQQAIAFGVVDAIHEKRP 222          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZ88_9STRA)

HSP 1 Score: 286 bits (732), Expect = 5.260e-90
Identity = 137/195 (70.26%), Postives = 167/195 (85.64%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKEGV 799
            +P+VLES   GER++DIYSRLLRERIIC+HG VT+ M+SLVTAQLL+LESE+P +P+ MYINSPGG+VTAG+A+YDTMQY+RPE+ TICMGQAASMGS+LL  G P  RF LPN+++MLHQPSGGA GMAADI I A EI++TRA LN I AEHT Q +EEIE+VMDRDF+M AQ+A +FGV+D ILTKR K+ +
Sbjct:   46 VPIVLESGAMGERSFDIYSRLLRERIICVHGEVTDVMASLVTAQLLFLESENPDRPVYMYINSPGGLVTAGMAMYDTMQYIRPEVQTICMGQAASMGSVLLAGGEPGYRFALPNSRIMLHQPSGGAQGMAADIDIQAREILRTRANLNRIMAEHTKQSIEEIERVMDRDFFMDAQQAKDFGVIDHILTKRTKDEI 240          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X7K7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.150e-89
Identity = 136/190 (71.58%), Postives = 163/190 (85.79%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKR 784
            +P+VLE + RGERAYDIYSRLLRERIICLHGPVTE M+SLVTAQLL+LESE P +P++MYINSPGG+V+AGLAIYDTMQY++PE+ T+CMGQAASMGSLLL  G+P  R+ LPNAK+MLHQPSGGA GMA+DIAI AEEI+KTRA LN +Y  HTGQ ++ +EK MDRD +    +A EFGV+D+ILT R
Sbjct:   21 VPIVLEQTSRGERAYDIYSRLLRERIICLHGPVTEDMASLVTAQLLFLESELPDQPLSMYINSPGGLVSAGLAIYDTMQYIKPEVRTMCMGQAASMGSLLLAGGAPGHRYALPNAKIMLHQPSGGAQGMASDIAIQAEEILKTRATLNNLYVRHTGQPLDRVEKAMDRDTWFDVTQAKEFGVIDQILTNR 210          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVD6_THAPS)

HSP 1 Score: 280 bits (716), Expect = 1.820e-88
Identity = 131/190 (68.95%), Postives = 165/190 (86.84%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKR 784
            +P+VLES   GERA+DIYSRLLRERIIC+HG VT+ M+SLVTAQLL+LE+E P+KP+ MYINSPGG+VTAG+A+YDTMQY+ PE+ TICMGQAASMGSLLL  GS   RF LPNA++MLHQPSGGA GMA+DI I A EI++TRA LN++Y  HTG+++EEIE+VMDRD +M  ++A++FGV+D++LTKR
Sbjct:    2 VPVVLESGTTGERAFDIYSRLLRERIICVHGEVTDSMASLVTAQLLFLEAEAPEKPVYMYINSPGGLVTAGMAMYDTMQYIHPEVHTICMGQAASMGSLLLAGGSAGCRFALPNARIMLHQPSGGAQGMASDIDIQAREILRTRANLNQLYVHHTGRELEEIERVMDRDTFMDVRQAVDFGVIDEVLTKR 191          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KWE2_HETAK)

HSP 1 Score: 280 bits (715), Expect = 1.550e-87
Identity = 137/216 (63.43%), Postives = 175/216 (81.02%), Query Frame = 2
Query:  176 RSYSSTRRAEMNYLPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPK---EGVGSGNV 814
            R ++S+     N +PMVLESS RGERAYDIYSRLLRERII +HGP+TEQ++S+VTAQLL+LE+EDP K + MYINSPGG+VTAG+AIYDTMQ+++ ++ TICMGQAASMGSLLL  G+P  R  LPNA++MLHQPSGGA GMA+DIAI AEEI++ R+ LN++Y  HTGQ + +IE+VM+RD +  AQ+A+ FGV+DK+L+KR     E   SG V
Sbjct:   29 RFFTSSWEPTANLVPMVLESSNRGERAYDIYSRLLRERIIYVHGPITEQLASVVTAQLLFLEAEDPDKKLYMYINSPGGVVTAGMAIYDTMQFIQSDVATICMGQAASMGSLLLAGGAPGQRSALPNARIMLHQPSGGAQGMASDIAIQAEEILRIRSSLNQLYQHHTGQALADIERVMERDTFFDAQQALNFGVIDKVLSKRDNSSDESCESGKV 244          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHM6_AURAN)

HSP 1 Score: 276 bits (707), Expect = 4.480e-87
Identity = 132/193 (68.39%), Postives = 168/193 (87.05%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKE 793
            +PMV+E S RGERA+DIYSRLL+ERII L+GPV ++++S+VTAQLL+LESEDP  PI+MYINSPGG+VTAGLAIYDTMQY++P + T+CMGQAASMGSLLL AG+  MR  LPNA++MLHQPSGGA G A+DIAI+A+EI+KTRA+LN+IY  HT + + ++EKVMDRD Y TAQEA++FGVVD+++  R K+
Sbjct:    2 VPMVIERSSRGERAFDIYSRLLKERIIILNGPVHDELASVVTAQLLFLESEDPTSPISMYINSPGGVVTAGLAIYDTMQYIQPAVATLCMGQAASMGSLLLAAGADGMRRALPNAQIMLHQPSGGAQGQASDIAIVAKEILKTRAKLNDIYVHHTKKPLADVEKVMDRDSYFTAQEAMDFGVVDEVVHPRTKD 194          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUT0_9STRA)

HSP 1 Score: 278 bits (710), Expect = 5.240e-87
Identity = 133/195 (68.21%), Postives = 164/195 (84.10%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKEGV 799
            +P+VLE S RGER+YDIYSRLLRERIICLHG VTE+M+S+VTAQLL+LE+EDP +P +MYINSPGG+V+AGLAIYDTMQY+RP + T+CMGQAASMGSLLL  G    RF LPNAK+MLHQPSGG  GMA+DIAI AEEI+KTR+ LN++Y  H  Q++ ++E VMDRD + +AQEA++FGV+D +L KR  E V
Sbjct:   25 VPIVLEQSSRGERSYDIYSRLLRERIICLHGAVTEEMASVVTAQLLFLEAEDPDRPCSMYINSPGGLVSAGLAIYDTMQYIRPPVHTVCMGQAASMGSLLLAGGEAGKRFALPNAKIMLHQPSGGTQGMASDIAIAAEEILKTRSSLNKLYVHHCQQELAQVEAVMDRDTWFSAQEALDFGVIDDMLRKREDEPV 219          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AV16_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.070e-86
Identity = 139/214 (64.95%), Postives = 172/214 (80.37%), Query Frame = 2
Query:  170 TTRSYSS-TRRAEMNYLPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKEGVGSG 808
            T RS SS T+      +P+V+ES   GER++DI+SRLLRERIIC+HG V + M+SLVTAQLL+LE+E+P  PI MYINSPGG+VTAG+A+YDTMQYV+P++ TICMGQAASMGSLLL  G+P  R  LPNA++MLHQPSGGA GMA DI IMA+EI++TRA LN++Y  HTGQ +EEIE+VMDRD++M   +AIEFGV+DKIL KR     G G
Sbjct:   88 THRSISSATKPVSAGLVPIVIESGAGGERSFDIFSRLLRERIICVHGQVDDHMASLVTAQLLFLEAENPTSPIYMYINSPGGVVTAGMAMYDTMQYVQPDVHTICMGQAASMGSLLLAGGAPGCRHALPNARIMLHQPSGGAQGMATDIDIMAKEILRTRANLNKLYVHHTGQSLEEIERVMDRDYFMDVNQAIEFGVIDKILDKRGDADGGEG 301          
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Match: ATP-dependent (Clp protease proteolytic subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N593_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.880e-86
Identity = 132/192 (68.75%), Postives = 163/192 (84.90%), Query Frame = 2
Query:  215 LPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLESEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNEIYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPK 790
            +P+VLESSP GER++DI+SRLLRERIIC+HG VT+ M+SLVTAQLL+LE+E P +PI MYINSPGG+VTAG+A+YDTMQYVRPE+ TICMGQAASMGSLLL  G+   RF LPN+++MLHQP GGA GMAADI I A EI++TRA LN +Y  HTGQ ++EIE+VMDRDF+M   ++IEFGV+D +L +R K
Sbjct:   69 VPVVLESSPGGERSFDIFSRLLRERIICVHGEVTDHMASLVTAQLLFLEAEAPDRPIYMYINSPGGLVTAGMAMYDTMQYVRPEVHTICMGQAASMGSLLLAGGAKGCRFALPNSRIMLHQPRGGAQGMAADIDIQAREILRTRANLNNLYVHHTGQTLDEIERVMDRDFFMDVNQSIEFGVIDDVLDRRDK 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9965.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATP-dependent5.050e-13684.13Clp protease proteolytic subunit n=1 Tax=Ectocarpu... [more]
ATP-dependent7.010e-9472.04Clp protease proteolytic subunit n=1 Tax=Tribonema... [more]
ATP-dependent5.260e-9070.26Clp protease proteolytic subunit n=1 Tax=Amphora c... [more]
ATP-dependent1.150e-8971.58Clp protease proteolytic subunit n=1 Tax=Dictyocha... [more]
ATP-dependent1.820e-8868.95Clp protease proteolytic subunit (Fragment) n=1 Ta... [more]
ATP-dependent1.550e-8763.43Clp protease proteolytic subunit n=2 Tax=Heterosig... [more]
ATP-dependent4.480e-8768.39Clp protease proteolytic subunit n=1 Tax=Aureococc... [more]
ATP-dependent5.240e-8768.21Clp protease proteolytic subunit n=1 Tax=Rhizochro... [more]
ATP-dependent1.070e-8664.95Clp protease proteolytic subunit n=1 Tax=Minutocel... [more]
ATP-dependent1.880e-8668.75Clp protease proteolytic subunit n=1 Tax=Odontella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9965contigH-canaliculatus_M_contigs9965:345..4492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNQ5
PFAMsCLP_protease
Model size1688
Max annot lvl2759|Eukaryota
KEGG koko:K01358
KEGG Pathwayko04112,ko04212,map04112,map04212
Hectar predicted targeting categorymitochondrion
Exons5
Evalue1.66e-141
EggNOG OGsCOG0740@1|root,KOG0840@2759|Eukaryota
Ec32 ortholog descriptionATP-dependent Clp protease, proteolytic subunit ClpP
Ec32 orthologEc-01_004640.1
EC3.4.21.92
Descriptionserine-type endopeptidase activity
Cds size759
COG categoryOU
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9965.1.2prot_H-canaliculatus_M_contigs9965.1.2Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9965 1213..4431 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854236.8661551-UTR-H-canaliculatus_M_contigs9965:344..12121696854236.8661551-UTR-H-canaliculatus_M_contigs9965:344..1212Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9965 345..1212 -
1696854236.9508584-UTR-H-canaliculatus_M_contigs9965:4431..44921696854236.9508584-UTR-H-canaliculatus_M_contigs9965:4431..4492Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs9965 4432..4492 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854236.8855908-CDS-H-canaliculatus_M_contigs9965:1212..13471696854236.8855908-CDS-H-canaliculatus_M_contigs9965:1212..1347Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9965 1213..1347 -
1696854236.899272-CDS-H-canaliculatus_M_contigs9965:2257..23801696854236.899272-CDS-H-canaliculatus_M_contigs9965:2257..2380Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9965 2258..2380 -
1696854236.9103818-CDS-H-canaliculatus_M_contigs9965:2923..30831696854236.9103818-CDS-H-canaliculatus_M_contigs9965:2923..3083Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9965 2924..3083 -
1696854236.9238029-CDS-H-canaliculatus_M_contigs9965:3683..38021696854236.9238029-CDS-H-canaliculatus_M_contigs9965:3683..3802Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9965 3684..3802 -
1696854236.937237-CDS-H-canaliculatus_M_contigs9965:4209..44311696854236.937237-CDS-H-canaliculatus_M_contigs9965:4209..4431Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9965 4210..4431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9965.1.2

>prot_H-canaliculatus_M_contigs9965.1.2 ID=prot_H-canaliculatus_M_contigs9965.1.2|Name=mRNA_H-canaliculatus_M_contigs9965.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=253bp
MLLRSIRPRALMRLGGTVPAAAPTSPAVASGNGFRRTTRSYSSTRRAEMN
YLPMVLESSPRGERAYDIYSRLLRERIICLHGPVTEQMSSLVTAQLLYLE
SEDPQKPINMYINSPGGIVTAGLAIYDTMQYVRPEICTICMGQAASMGSL
LLTAGSPDMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNE
IYAEHTGQKVEEIEKVMDRDFYMTAQEAIEFGVVDKILTKRPKEGVGSGN
VE*
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mRNA from alignment at H-canaliculatus_M_contigs9965:345..4492-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9965.1.2 ID=mRNA_H-canaliculatus_M_contigs9965.1.2|Name=mRNA_H-canaliculatus_M_contigs9965.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4148bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9965:345..4492- (Hapterophycus canaliculatus Oshoro7m male)
GCTCGACACACTTTCCTGTTTTCCTGCTCCCTGTTGTGCACCAACCACGA TAGCTTCAATTATGCTGTTGCGATCGATACGCCCCCGAGCATTAATGCGT CTGGGCGGCACAGTACCAGCTGCCGCTCCCACTTCTCCGGCGGTTGCCTC CGGGAACGGCTTCCGCCGAACTACCAGGTCTTACAGCAGCACACGGCGAG CAGAGATGAACTACCTGCCCATGGTGCTCGAGTCAAGTCCGCGAGGGGAA CGCGCATACGATATCTACTCAAGGCTTCTCAGGGTACGTCTTTTGGACAA ACTCATTCATGTAAATACTCTGCTGCTTCTTGCACTTGAATTTGAAGTTT GTCAGTGTCAGCCCCCCAAGTTGATGTACCCGAGAATAATCGCCTGTTTG CGCCGAGTGTTCAGGTTGACGCATTGACGTGCAGATACAGGTGGGTCAAC ATCGGAGAGCGTATGACGGGTCTATGGTTGTGTGTTTCTCCGACGCTGCA TACACGGGTTGTGATCAAGAGCGCATATGTTGAGCGGGGGATGTTTTGTT CCTCGCTCTGTTCGCCAATACGAAGCACCTCGAGACAGAACTAAAAAAAT CCAGGATACTGTACAACGTTCGATTCGTTGCATTGAAGTCACCGGTTGGC GGCGGCGTCCTCTGTTCGTCACGCGCGTGCTCGTTTTCAGGAACGCATCA TCTGCCTGCATGGACCTGTGACGGAGCAAATGTCTTCCTTAGTGACGGCC CAGCTCCTTTACCTGGAATCTGAAGATCCACAGAAGCCAATCAACATGTA TATCAACAGGTCGGTGAACACTCTCTGATACGGCAGCAAGACACGCAGCA ACTTGCTGTCATCACACCCTTCTTTCCAAGCAGTCAAACGTAGCGGGTCG CACTCGATGTCGTTGCCCATGTGTGTATCTCCATTGCGTCCGAGAGCTGT GTGTCGTCGAGCTCGCATTTCATCCTAACCGCGGGTGTCTTCTTCACGCC CGGGCGGCAGGAGATCTCTGGTTCGGGTGGTCGCTTCCTCCTGTGTTCCT GGTGTCTTTCTTGGATTCGACACTTGTCGTCCTGCCGTCTTGTTCGGTAC AAGGAGCATTGGTCAGTCTCGGCACACGCCATCCGTGCGAGGGTGCGGGC ACGGATACGCGCAGCATAGAATGGGCAACGTCCACATGCCGCGTGGTCGT TGCAGCCTTGGAGCAATCGTGGTTTGGCTTGGGTAGCGAACATGCACTGC CAAGTTTCCAGGGTCGTAGATGGAGAGCTGCAACCGCGTCCGTTTCATAC ATCCTGCTGAAACCCATTGTCACGGCTCCAAGTTGAGGGCATGGCTTATA ATAATTCCTCTCCTCGTACGCGTCCCCCATCGTTCACCTGAAATAACCGT CGAACGTAGCCCGGGCGGCATAGTCACGGCTGGATTGGCGATCTACGACA CAATGCAGTACGTTCGACCGGAGATCTGCACAATCTGTATGGGGCAGGCG GCGTCGATGGGGTCGCTCTTGCTGACTGCGGGTTCTCCAGATATGCGTTT CATTCTCCCAAACGCGAAGGTGAGGCGGCGTGTAGGATGGGGAAGGCTTA GACGGGTCCGAACGTCGAAGACTGCTCATGGAAATTATTTTGGGAAAGCG CTTGTCCAGGCACTGGGAAGAGCTTTGAAACGTGAAAGTAAAGGCCCCAC CCAGAACCTGTAACCTGGTTCGCCAGGAGAAAGCGAATAGGTGCCCAGCG TGCAGAAGTGGACGGAAGCGCAAAGCTCCGCGTAGTCTCCACTTCCTTGC TTGCCTAGCTTCCTCTCGCGCACGCCTGTCTCGCCTGCTTTTGATGGCTC AGCGCGAGGTTATCAAGAGGGGTAGAATAGCTTGCCACCCGTTTGGCACA AGAACGAGCATGACTTGTCCACCTTGCGTGATTCTAAGCGTTCCAACCAA GCTGTATCCTCATCGCCTACTACTGCTGTTCATGCGGTTCCGCGAAGGGG TCGAGCGGTTCCGCGAAGGGGTCGAGCGGTTCCGCGAAGGGGTCGCAGAA ACTAGACGACGCTCCGCATCACACGCTTGCTGCGCCGTACGTCGATCTAA TCGACGGGACAGGTCATGTTGCACCAGCCATCAGGCGGGGCGAATGGCAT GGCGGCCGATATCGCCATCATGGCGGAGGAAATAATCAAGACCAGGGCGC GGTTGAACGAGATATACGCGGAGCACACCGGACAAGTGAGTCGTGAGACA CGCAGCCGCTGCTTCTTTCTGTGCCGTGGACGCATGCACGACGCCTGCTC CTTGTAGGATGAAGAGGGGTGTCACGTAAGGCCAACGGCCAAAACCCAAG CCTACGATATTTCCGTGGTGCCCGAACGGACAGACAAGAAGTGCTTGCTG CTGGTTCGTCGGGCAGCTTCGCGTTGTGGCCGACATGTGGTTGCTGTGCT CTGCTGTGTCTCGTGGGTCACATGTGAAATGTCGACGCTGAGATTCCAAC GCCGATGCACCTACACGTATCACGGTACTTCTCCCATCCTGTGAGATGCT TGGCTCTGGTGTTTCGGCACCCTGTCGCCAGCACGCCGCCACCGAGGCAT ACAGCATACTTGTGCACGGACGTTGCCTTGTCGGACAGGCACAGGATGTT TCCAAGTACAATACTTCGTACAATACTTCGTACAAATCAAGCGCAATTGT GTGGAGAGAAAGTCCGGCTGGCTTGTGTTTCGATACTAGTGCTTGGGCGT CACAAGTGGGCGACGTGCGCTGCCTTGCGACGTGTGGACGCCGATCTTCG TCACCTTCAGAATGTCGACGTTCGTTTCCTCTTTGGGTGTCCCTACTGGA TCATAGCAAGAAATCTCCCGTTCCAGCGCGAAGATCATGAACAGCAGTGC AGGCATGCCAGAGCGCGCCACAAAAAAATTATACCGCCTTTCCTCGATCG TCGATCCCATCTTCTTGCTTTGCCATCCACACCTCAACTGTCATCTTGAC GCACTTTGCTGCTCCCGATGATCTTCGTCGTGCCGTTGTCGGTCCCTCCG TTCCTTTTAACCTACCGGACTATCGCGCCGCCTGTTGGTGCGGATCCGGC TGGGTTCCGCCCCTCCTGGGCCTGTCTCTTTTTTGTCTCCTAAAGAAAGT GGAGGAGATCGAGAAGGTAATGGACCGCGATTTCTACATGACCGCACAGG AGGCGATCGAGTTCGGCGTCGTAGACAAGATTCTTACAAAGCGGCCAAAA GAGGGCGTGGGCTCCGGAAACGTGGAGTAGTTCGTATGATGCCATAGTTT TTGTAGGAATGAATGCTGCCGTGATGTGGTGAAGAACGCGCACGTGTTGT CGGGGATCTCCTGTTAGCTTGTTTGGGTATTCGGCGCTCTCACGTGCTTG TCCTTGAGTACTCTCATCAAAAGCTCTGTCGGAGCTCTGATGCGTACTGT CGTGTCGGCATTTCTTGAGCACGTCGTCAGTCGTGGGTGTGGGAAGACAG TCAGCAGGAGAGAAGGCCCCGTATCTAGGTCATCACGTAACGGGAGACAG TGGAGAGGTTGGGATCTGCCCTCTTGGGCGGGAACGGGCGTTAATGTGTG TATGAGAAAACTGAAGATTATCGTCGTCGCTCACCCCGGGAGGGAACAGG GTGTAAATAGTAGTGGATAATTACCAGACTGGCCGGAGATAGGTCCATTC TGTATCTATACAATGCCTCGGAGCTGTTGTGGCAACGTCAAATTGTTCGG TACAACTTGAACTACCTATCTAAACATAGCCAAATGTGCCAAGATATTCC TGAAATTGGGGGTGGGGTTTCACTCCCCCGAGGGTACGACCGAGGGTATC CCACCATTTTCCGGTGAGGAGGCGTTTTTGATACTTCGACGGATGGGGTG AATACATTCCTCAAGCGAGTTGTTTTGGCGCTTTTCGTTGGATCTCTGGC CTCTTTCAACAACGTCAAGTTCATACGTCAGACCTGTTGTTGAAGTTCCT CAGCCGGATCGATGACAACACCCGAAACATACGCGATCACCATGCGCACG AAGGTCAAGATTTGATGTCACAGTGAAAACGAGAAAAAACGAGAAAACAG TGCGCCCATGGTAGGGCTCGAACCCGCGTAAACAACGAGAATTCTTTG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9965:345..4492-

>mRNA_H-canaliculatus_M_contigs9965.1.2 ID=mRNA_H-canaliculatus_M_contigs9965.1.2|Name=mRNA_H-canaliculatus_M_contigs9965.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=759bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9965:345..4492- (Hapterophycus canaliculatus Oshoro7m male)
ATGCTGTTGCGATCGATACGCCCCCGAGCATTAATGCGTCTGGGCGGCAC
AGTACCAGCTGCCGCTCCCACTTCTCCGGCGGTTGCCTCCGGGAACGGCT
TCCGCCGAACTACCAGGTCTTACAGCAGCACACGGCGAGCAGAGATGAAC
TACCTGCCCATGGTGCTCGAGTCAAGTCCGCGAGGGGAACGCGCATACGA
TATCTACTCAAGGCTTCTCAGGGAACGCATCATCTGCCTGCATGGACCTG
TGACGGAGCAAATGTCTTCCTTAGTGACGGCCCAGCTCCTTTACCTGGAA
TCTGAAGATCCACAGAAGCCAATCAACATGTATATCAACAGCCCGGGCGG
CATAGTCACGGCTGGATTGGCGATCTACGACACAATGCAGTACGTTCGAC
CGGAGATCTGCACAATCTGTATGGGGCAGGCGGCGTCGATGGGGTCGCTC
TTGCTGACTGCGGGTTCTCCAGATATGCGTTTCATTCTCCCAAACGCGAA
GGTCATGTTGCACCAGCCATCAGGCGGGGCGAATGGCATGGCGGCCGATA
TCGCCATCATGGCGGAGGAAATAATCAAGACCAGGGCGCGGTTGAACGAG
ATATACGCGGAGCACACCGGACAAAAAGTGGAGGAGATCGAGAAGGTAAT
GGACCGCGATTTCTACATGACCGCACAGGAGGCGATCGAGTTCGGCGTCG
TAGACAAGATTCTTACAAAGCGGCCAAAAGAGGGCGTGGGCTCCGGAAAC
GTGGAGTAG
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