mRNA_H-canaliculatus_M_contigs9943.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9943.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9943.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Myb-like (DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 4.020e-174
Identity = 254/285 (89.12%), Postives = 264/285 (92.63%), Query Frame = 1
Query:    1 TQPEALSQLDTSQSDLMVLDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLNEGNVEPYLPHEWTEQEANVLAHLVGMYGATNWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSRD-----------------EDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISRQIAALK 804
            ++PEALSQLDTSQSDLMVLDADLWIVRERG+HCSSNECIYKDK +GISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR LHKKTPAEAVLNEGNVEPYLP EWTEQEA+VLAHLVGMYG TNWGII+AGVATK+ETQCMLHWR+ALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSR+                 EDEKLLQLRGQQNKSFAKIAEQI+GRSYNDVKNRWSQISRQIAALK
Sbjct:  548 SKPEALSQLDTSQSDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVATKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREARNKKQRVLCAYVGKGLEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 832          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: MYB (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 5.720e-169
Identity = 243/257 (94.55%), Postives = 252/257 (98.05%), Query Frame = 1
Query:   34 SQSDLMVLDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLNEGNVEPYLPHEWTEQEANVLAHLVGMYGATNWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISRQIAALK 804
            S+SDLMVLDADLWIVRERG+HCSSNECIYKDK +GISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR LHKKTPAEAVLNEGNVEPYLP EWTEQEA+VLAHLVGMYG TNWGII+AGV TK+ETQCMLHWR+ALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSR+EDEKLLQLRGQQNKSFAKIAEQI+GRSYNDVKNRWSQISRQIAALK
Sbjct:  545 SKSDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 801          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: MYB (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.070e-68
Identity = 120/254 (47.24%), Postives = 157/254 (61.81%), Query Frame = 1
Query:   55 LDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLNEGN-------VEPYLPHEWTEQEANVLAHLVGMYGAT---NWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGA-WSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNR 768
            LD DLW+V E+G  C+S +C Y+D A+ I+SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R   K  P +    E +       VE Y P +W ++E   L  LV    A     W  IA    TK+  QC+LHWR+ LN N  ++G GTW + EDER+  L  +F     G RW+ +AE MPGR AKQCRERY N++DP +++   W+ +ED  ++QL  + +  FAKIA  I GR Y+DVKNR
Sbjct:  210 LDKDLWVVVEKGSVCTSRDCTYRD-AARIASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNR 462          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 1.700e-67
Identity = 124/271 (45.76%), Postives = 165/271 (60.89%), Query Frame = 1
Query:   55 LDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLNEGN-------VEPYLPHEWTEQEANVLAHLVGMYGAT---NWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGA-WSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQI--SRQIAALKVRS 813
            LD DLW+V E+G  C+S +C Y+D A+ I+SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R   K  P +    E +       VE Y P +W ++E   L  LV    A     W  IA    TK+  QC+LHWR+ LN N  ++G GTW + EDER+  L  +F     G RW+ +AE MPGR AKQCRERY N++DP +++   W+ +ED  ++QL  + +  FAKIA  I GR Y+DVKNR++ +   RQ+A     S
Sbjct:  339 LDKDLWVVVEKGSVCTSRDCTYRD-AARIASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNRFNLLVKRRQVAVKAAES 608          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Putative (c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 7.170e-61
Identity = 113/281 (40.21%), Postives = 158/281 (56.23%), Query Frame = 1
Query:   52 VLDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAV-----------------------------------LNEGNVEPYLPHEWTEQEANVLAHLVGMYGATNWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGA-WSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISR 786
            +LD  LW V ER   C++ +C Y+ +    + RRHYHA C+H H+ G + GM F HHQLEK+QKHQRAH     + T   ++                                   + + NVE + P +WT +    L  LV   G   W  IA  +  K+ T CMLHWR  +N +  VKG+GTW + EDER+  LV++ G +WS +A H+PGR+AKQCRERYLN+LDP LR+   W+ DE+  L++L   +   +A+I  Q+ GRSYNDV+NR++ I R
Sbjct:  115 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVGVNPDHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQR 394          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: MYB (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 4.440e-59
Identity = 115/276 (41.67%), Postives = 157/276 (56.88%), Query Frame = 1
Query:   52 VLDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAV------------------------------LNEGNVEPYLPHEWTEQEANVLAHLVGMYGATNWGIIAAGVATKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGA-WSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISR 786
            +LD  LW V ER   C++ +C Y+ +    + RRHYHA C+H H+ G + GM F HHQLEK+QKHQRAH         + A                               + + NVE + P +WT +    L  LV   G   W  IA  +  K+ T CMLHWR  +N N  VKG+GTW + EDER+  LV++ G +WS +A+H+PGR+AKQCRERYLN+LDP LR+   W+ DE+  L++L   +   +A+I  Q+ GRSYNDVKNR++ I R
Sbjct:  858 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQNTQTSSIGSSAAKPRSPTTVATAPRNKRVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVGVNPNHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQR 1132          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW6_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.450e-54
Identity = 104/239 (43.51%), Postives = 134/239 (56.07%), Query Frame = 1
Query:   97 CSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRIL--------HKKTPAEAVLNEGNVEPYLPHEWTEQEANVLAHLV-GMYG--ATNWGIIAAGVA------TKSETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVK 762
            C +  C  +D AS ++ RRHYHA C+HRH  GPK GM FHHHQLEKI+KHQ AH            H      A LN   +E + P  W  +    L  LV G  G  ++ WG     +A      T S  QC+LHWR  +N    V G  TW  VED R+ SLV +FG +WS VA+ +PGR  KQCRER+LN +DP   R AW+ +EDE LL++  +    FA+ A+    RSYN+V+
Sbjct:   18 CHAEMCTLRDDASLVARRRHYHARCEHRHSTGPKTGMRFHHHQLEKIRKHQSAHAAEASRDRGGAPHLDPSMMAELNSHGIELHNPEAWPPEATRHLDTLVRGPVGRPSSAWGEFPRALAAALPGFTVSPQQCLLHWRLVINNGGAVTGVRTWSDVEDARLNSLVNMFGTKWSAVAQLLPGREPKQCRERFLNVVDPSKTRKAWTPEEDELLLRVHDRVRNQFARTAKYFSDRSYNEVR 256          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC17_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.460e-53
Identity = 111/277 (40.07%), Postives = 143/277 (51.62%), Query Frame = 1
Query:   55 LDADLWIVRERGDHCSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLNEGNVEPYLPHE--------------WTEQEANVLAHLV----------GMYGATNWGIIAAGVATK--------SETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPEL-RRGAWSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISR 786
            +D  LW+    GD C + +C  +  A+ +++RRHYHA CDHRH  G K GM FHHHQLEKI+KHQR H R     +  E   N  +  P    E              W+    + L  LV          G  G   W  +AA +A +        S  QCML WR  +N  ATV G GTW   ED+R+  LV  F Q WS+VA +MPGR  KQCRER+ N ++P L R G W+ +ED  L  +  Q    FA  A  + G SYNDVKNR++ + R
Sbjct:    1 IDPALWVRVNLGDRCEAAQCTLRAPATRLATRRHYHAKCDHRHGAGAKAGMRFHHHQLEKIRKHQRVHARRAAAASAEEQTWNSPSAVPPDVTEALAAAGLELHDVRVWSAAATDRLRGLVEAQQQRTSGGGAAGRVAWEAVAAALAAERGEGEAELSAAQCMLQWRAVVNQGATVTGVGTWCEPEDKRLAVLVAHFNQAWSSVARYMPGREPKQCRERFNNVVNPALLRSGPWTPEEDALLESMMQQTGHRFADAARCLPGHSYNDVKNRFNTLQR 277          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA42_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.820e-43
Identity = 92/221 (41.63%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   97 CSSNECIYKDKASGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR--ILHKKTPA--------------EAVLNEGNVEPYLPHEWTEQEANVLAHLVGMY------GATNWGIIAAGVATK--SETQCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPEL-RRGAWSRDEDEKLL 684
            C + +C  +   + +++RRHYHATC H H  G K GM FHHHQLEKI+KHQRAH R  ++    PA              EA+L  G  E Y P  W+      L  LV         G   W  +AA +     S +QCMLHWR  +NG A + G GTW + ED R+ +L   F Q W+T+A  MPGR  KQCRER+ N +DP   +R  W   EDE L+
Sbjct:    4 CEAQDCTMRAAGTRLATRRHYHATCGHVHASGAKAGMRFHHHQLEKIRKHQRAHKRSSVIALTAPAPDSPYPGGLPVEVAEALLR-GGAELYDPALWSADAGARLGALVEQQHARRGVGRVAWDKVAAAMRAPALSASQCMLHWRDVVNGGAIIMGVGTWCNAEDTRLRALTAHFRQSWATIARFMPGRGPKQCRERFNNVIDPASHKRAPWKPAEDELLM 223          
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Match: Homeodomain-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.160e-38
Identity = 65/118 (55.08%), Postives = 91/118 (77.12%), Query Frame = 1
Query:  439 QCMLHWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSYNDVKNRWSQISRQI 792
            QC+LHWRYALN +  V+G G+W   ED R+ +LV + G +W+ VA  MPGR+AKQCRERYLN+LDP+L+RG W+ +E++ LL+L   QN+ +A+I  Q+ GRSYNDVKNR++ I R++
Sbjct:    2 QCLLHWRYALNEDQQVRGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9943.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Myb-like4.020e-17489.12DNA-binding domain containing protein n=1 Tax=Ecto... [more]
MYB5.720e-16994.55protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
MYB1.070e-6847.24protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.700e-6745.76protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Putative7.170e-6140.21c-myb-like transcription factor n=1 Tax=Ectocarpus... [more]
MYB4.440e-5941.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.450e-5443.51protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.460e-5340.07protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
Uncharacterized4.820e-4341.63protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Homeodomain-like6.160e-3855.08protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9943contigH-canaliculatus_M_contigs9943:24..4320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCS2
PFAMsMyb_DNA-binding
Model size816
Max annot lvl2759|Eukaryota
KEGG koko:K09420
KEGG Pathwayko04151,ko05166,map04151,map05166
Hectar predicted targeting categoryother localisation
Exons6
Evalue6.59e-175
EggNOG OGsCOG5147@1|root,KOG0048@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-03_001850.1
DescriptionRNA polymerase II transcription regulator recruiting activity
Cds size816
COG categoryADK
BRITEko00000,ko00001,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9943.1.1prot_H-canaliculatus_M_contigs9943.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9943 24..4320 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854235.6215146-CDS-H-canaliculatus_M_contigs9943:23..1461696854235.6215146-CDS-H-canaliculatus_M_contigs9943:23..146Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 24..146 +
1696854235.6340597-CDS-H-canaliculatus_M_contigs9943:907..10701696854235.6340597-CDS-H-canaliculatus_M_contigs9943:907..1070Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 908..1070 +
1696854235.6467292-CDS-H-canaliculatus_M_contigs9943:1574..17291696854235.6467292-CDS-H-canaliculatus_M_contigs9943:1574..1729Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 1575..1729 +
1696854235.65952-CDS-H-canaliculatus_M_contigs9943:2283..23851696854235.65952-CDS-H-canaliculatus_M_contigs9943:2283..2385Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 2284..2385 +
1696854235.6710587-CDS-H-canaliculatus_M_contigs9943:3449..35721696854235.6710587-CDS-H-canaliculatus_M_contigs9943:3449..3572Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 3450..3572 +
1696854235.6849282-CDS-H-canaliculatus_M_contigs9943:4170..43201696854235.6849282-CDS-H-canaliculatus_M_contigs9943:4170..4320Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9943 4171..4320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9943.1.1

>prot_H-canaliculatus_M_contigs9943.1.1 ID=prot_H-canaliculatus_M_contigs9943.1.1|Name=mRNA_H-canaliculatus_M_contigs9943.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=272bp
TQPEALSQLDTSQSDLMVLDADLWIVRERGDHCSSNECIYKDKASGISSR
RHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVL
NEGNVEPYLPHEWTEQEANVLAHLVGMYGATNWGIIAAGVATKSETQCML
HWRYALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAK
QCRERYLNNLDPELRRGAWSRDEDEKLLQLRGQQNKSFAKIAEQIEGRSY
NDVKNRWSQISRQIAALKVRSR
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mRNA from alignment at H-canaliculatus_M_contigs9943:24..4320+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9943.1.1 ID=mRNA_H-canaliculatus_M_contigs9943.1.1|Name=mRNA_H-canaliculatus_M_contigs9943.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4297bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9943:24..4320+ (Hapterophycus canaliculatus Oshoro7m male)
ACGCAGCCGGAGGCTCTGTCGCAGCTCGACACGTCCCAGAGCGACCTCAT GGTGTTGGACGCGGATCTGTGGATCGTCCGGGAGCGCGGGGATCATTGCT CCTCGAACGAGTGCATCTACAAGGTGCGCGAGGCGTGCGCGCTTCGATTT GTGTGTGTTGTTCTGAACTTTTTCCCCCCGTAGTGGTGTCGTTGTACGAC ACCAAAGCATTCCGTGGCGATCGTTTGCAAAATGCTGTGTGTTATCTGTC TTTTTTTTTTGCGTGTCTAAGGTTCGAGAGGGGATTGTCGGTGAGCGTTC CCCGTGTTTTGCGGGACGCTTTACACTTGGGAGGAGTGGGGTCTTCGTCT TTCGTCTGAGAGTTGTCGGTCGTTGATCTCGCTTGGAGGTGCACGCTTGA GCTCGTCACGTGTGGCGGAAATTAGCTCGTGGTATGCTTTCGTGCCCGCA CAGCAGTGGCAACCCTTTCTTCCGAGATCCATCTATCGCGCTATCCTCAA GTTACCTTTGAGCCGTCTCTTACTTCGAAGTGCTTACTTTTGACACCCGA CGGCCGTCTTTTTTTCGTTTTTTTGTGTGTGTTGTTTTTGTTGTAGATTT GGGTGCGCGTCTCTCTCGCTTCTGCTTCCCACACGATGTTACTATCGGTA GTGTCGCTGCTGCTCGGATACAGGGGACGTCAGCCGGCGCTCTGTCTTTT TTGTCCCTGCAGCAACGCGTGTGCGACGCACACCGCTGTGCACAAGATGC TGCCGTACACTTTTCTTCTTACTTGGTGTCTAGTCGCTGCTTTCTGGGAT GCTCTCGTCTACGCATTTCATGCGATTCATCCTTGTGGTCCTCGCCTCGT CGTCGAACTCTTGATCGATCCTCCCCGTCGACAGGACAAAGCCTCCGGGA TCTCGAGCCGGCGACACTACCACGCCACGTGCGATCACCGCCACAAGGGC GGCCCCAAGGGGGGCATGATCTTCCACCACCACCAGCTCGAAAAGATCCA GAAGCACCAGCGGGCGCACATCCGCATCCTCCACAAGAAAACGCCAGGTG CCTTGTTCTTTTTCACGTCGTATTCCTGTTTTTTCTTTTTTGCACCTTCC TTCCCCTCTCGCGCGCCCCTCGTGCTTACTTTTCGCGCCGTTTTTTCGTC TGTGTCTTCTCCGTTGGCCCACGATTAAAAAAATGTAATTCGCCATGTAC ATTCGGCTGGTGAACACGACTGGCTATCACCGGGGTCGGAGTGTCGACCC GATCTCTGCATAAGGTGGATCCTCCGTGTGGTATATTCCGTTCTTCCGAA AGGGATACGATCTGCACATGGGGGTCCCCGTGTGGCGTAGTGTACCCACC TAGACTCAAATTGGGTTCTTGCGTACATGCGACCCCCGCCCTTACAAGAA AAAGCTGGTAAATGTACGAAAAGTCCGCGGGAAAAGAAGAGCGACAGAGA CCCACATGATCAAGTCCGGAGGGGTTCCGTGGTCTCATTTGTCATTCCTC TGCGAACGTGCATGCCGTGTACGTGCTTGCCGACGGTTTTCATGAAAACA GCGGAGGCGGTGCTGAACGAGGGGAACGTGGAGCCTTACCTTCCGCACGA GTGGACGGAGCAGGAGGCGAACGTCCTGGCGCACCTGGTGGGCATGTACG GCGCGACCAACTGGGGCATCATCGCCGCCGGGGTGGCCACCAAGAGCGAA ACGCAGGTGAAAGAAACGAGAAAACACGGAGCCAATTATGCCATGCTTTC GCTGCCTGGGTTGTACGAGAGGTGCGGTGTACAAGGATGTGACGGGTGGA ACGACGGATGGGGAAGAGAGAAGCCAGCTTCACGATGGGTCTGACGAGGA AGGTTCAGGGTGAAGGGTGCCGCTTCTGTGTGGTGGCAGAAAAGTAGAGC TTCCAGAATGGCCAAAGAGGCCATGCTTCTTCTAGGCAGGGGCTTTGAGG CAAAATTTGCCGGCGTAAGATCTTGAGCAATCTTTGGCATCGCCGACTCG GCAAACTGTGTCGGCTGGGCCGAGGCACCTCGGTGCAAGAGTACGAGTGT GGGGCGCCTACTTTTTTTTCGGTGGCTCCGGGAAGTCGTATTCCCAGCTG ATGTGCCCCCCTTATTTGAAGGCGGCGGTCTGCCGCGCTTTCTGCGACGC CGCCCGCCTTCCTGGCGGCGAGACCGTCCGGTCTCACGTCTCACGTCACC TGAAACCTCGTCTCGTTTCATCTCACGATGGAAAACAAAAAAAAAACTGT TGCGCCGCAGTGCATGCTTCACTGGAGGTACGCGCTCAACGGGAACGCGA CGGTGAAGGGGACCGGGACGTGGCAGTCGGTGGAGGACGAGCGGATGCTG TCCTTGGTGCAGGTGAGGAGATGAGATGAGGATGGGCCAGATGACGTCAC GGGGTTTCCTTTCCGTCAGAATTTTTTTTTTTTTGTCGGGAGGGCGGGGG CAGGTGTGCTGCGCGCAGCGGCAGTCTCGCCGCCGTGACGCGCTGAAGAA GGCTCAACGCGAGTTGTCTGGTGGCGCACCAATGCAGTGCGGTACCGGGC ATGGCTCGCCGGGCTGCTGCGCGCGGGGGCCTTGAAGCCGCGCTTCGTTT GAGCGCGCGGTCCCCGTCGGGGAGGAGGCGTTCGTGTCTGCTGTTGTGGG GTCATGACGTACCTGGGAAGCTGTTCCGCGCGTTTCCGTAGATGGGAGGG AGGCGTGTGCTTGCTGTCTATCACACGTGCGTGCGTGCGCAGCGGCGGAT GTAGCGTTGTCCGGGAAAGAGACGAGGAGGGCTGTACCACCACAAGCCAG ACGTGGCACGTTTGTGGCAGCACGGTACAGTGTGTCGGAAGTTTGGCTCA ATGTCTCGGTGGGTGGAGGAGCTGGAGCAGTGGCACGGGTGGTGTACCCC CGGTCGTCTCAAGCACCATAGCCACACCACAGCCACGGCCGGGACCGTTG CACACCACACGACACCGCCACGACCGCACCGCATCGCTTCCGACACCCTT CCCACACCCCTGGTCCGGGATCGCTGCAAGCTCGGTTTGGCGATAAGTGC TTTCCGGTCAATGTTTTTCCTCCCCCACAGAACCTGTTCGAAGCTGTCAT GTGCAGCCTGTTTCTAAATGACTCCACCAGTACAAGCACGGACGGTCACA CTCCCTGGGGTGGCGTGCCTTGGGTTCATCGCACAGATCCTCCGAAAGGA AGATGTCTCCCCACGACAACCTCCCACTGTCCACGGTGTTTCGGTGGGCC GTAAGTAGCGATCGCAAACCCGCCTCCCCCTCGCCTCCCCATGACATGGC AAACACTGAGAGGAACGGTGCTCCGTCTCGACAGAGATGCGTGTTAAACA ACGATTGCTCTACCCCCCCCCCCCCCCCCCGACCCTCTACACGCTTCTCT TGCCACACGTTCTCCTCTCGATGCAGATTTTCGGCCAGCGATGGTCCACC GTTGCGGAACATATGCCGGGGCGGCTGGCGAAACAGTGCCGAGAACGGTA CTTGAACAACCTGGACCCGGAACTGCGCCGCGGAGCGTGGTCGAGAGACG TGAGTGTGTGGTGGTATCGTGTTTCCAGCCGTTTCACACGCGAACTCTAT GGGGCCCTTGCTCTGCGGGTTTGATGCGTGTTGTGATGCCTTCCAACGTA GGGAGAGGCCGGCGATTTGCTCTTTGGCTCGGCATCCAGTCGACGACCGC TAGAAGCTCTGGAAGCGAGATAAATAATGGCAGATAGAGTTTCAGACTCC CGCCCCCCTCCGTCACAGTAAGCCGATGACCATGATGTGAAACCTACGGT AGCTGTCAGCGGGATGGGATGGAAGCACTTGTGGGTAAGAGTTTACGATA CACGGAGCACCTTACAACCATAGGCTTGCCACAGGTGAAACCCCCATCGT TCCTGCAGAGTGAAGCTGGGCAGAGATGCCTCTCCCGGTATTCGTGCTGC CAATTTTGTTCTCCTGGCTCCACCCAATCACACGGCCGCCGTAGCATATT GCGCAGGTACCTCAAAGTCCCGTATTATCATGTATCTTGTACTTTCATGT ACCCTTCGGGACAACCAGTGATACTCTTTTCTCTCTCTGTGTATGTCTGT GTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTTCCAGGAG GACGAGAAGCTGTTGCAGCTACGAGGCCAGCAAAATAAGAGCTTCGCCAA GATCGCCGAGCAAATCGAAGGACGGAGCTACAACGACGTCAAGAACCGCT GGTCGCAAATCAGCCGCCAGATCGCAGCCCTCAAGGTCCGTAGCCGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9943:24..4320+

>mRNA_H-canaliculatus_M_contigs9943.1.1 ID=mRNA_H-canaliculatus_M_contigs9943.1.1|Name=mRNA_H-canaliculatus_M_contigs9943.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=816bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9943:24..4320+ (Hapterophycus canaliculatus Oshoro7m male)
ACGCAGCCGGAGGCTCTGTCGCAGCTCGACACGTCCCAGAGCGACCTCAT
GGTGTTGGACGCGGATCTGTGGATCGTCCGGGAGCGCGGGGATCATTGCT
CCTCGAACGAGTGCATCTACAAGGACAAAGCCTCCGGGATCTCGAGCCGG
CGACACTACCACGCCACGTGCGATCACCGCCACAAGGGCGGCCCCAAGGG
GGGCATGATCTTCCACCACCACCAGCTCGAAAAGATCCAGAAGCACCAGC
GGGCGCACATCCGCATCCTCCACAAGAAAACGCCAGCGGAGGCGGTGCTG
AACGAGGGGAACGTGGAGCCTTACCTTCCGCACGAGTGGACGGAGCAGGA
GGCGAACGTCCTGGCGCACCTGGTGGGCATGTACGGCGCGACCAACTGGG
GCATCATCGCCGCCGGGGTGGCCACCAAGAGCGAAACGCAGTGCATGCTT
CACTGGAGGTACGCGCTCAACGGGAACGCGACGGTGAAGGGGACCGGGAC
GTGGCAGTCGGTGGAGGACGAGCGGATGCTGTCCTTGGTGCAGATTTTCG
GCCAGCGATGGTCCACCGTTGCGGAACATATGCCGGGGCGGCTGGCGAAA
CAGTGCCGAGAACGGTACTTGAACAACCTGGACCCGGAACTGCGCCGCGG
AGCGTGGTCGAGAGACGAGGACGAGAAGCTGTTGCAGCTACGAGGCCAGC
AAAATAAGAGCTTCGCCAAGATCGCCGAGCAAATCGAAGGACGGAGCTAC
AACGACGTCAAGAACCGCTGGTCGCAAATCAGCCGCCAGATCGCAGCCCT
CAAGGTCCGTAGCCGC
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