mRNA_H-canaliculatus_M_contigs9903.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9903.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9903.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.490e-27
Identity = 67/155 (43.23%), Postives = 83/155 (53.55%), Query Frame = 1
Query:    4 QASTGEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPTLCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSCG 468
            +A  GE+ LW +L+P +VERARQTY HT DC+Y   SD    LC CG+GKDL       I+ ANA G   P+   +YRAA SPLYAP   + F  + A    A V+G                         R VSYCSK+CQR+ WK HK +CG
Sbjct: 1225 KAYPGELALWTALLPVAVERARQTYAHTADCTYASPSDAPLALCDCGRGKDLHSECMHSIELANAMGARVPVHPSVYRAAFSPLYAPPGTSSFVTV-AKMAAASVAGP------PKCAKCGIGGKSLQCTRCRKVSYCSKECQRQHWKIHKAACG 1372          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP4_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.150e-26
Identity = 70/154 (45.45%), Postives = 86/154 (55.84%), Query Frame = 1
Query:    4 QASTGEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPTLCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            +A +GE+ LW SL+PA+VERARQTY HT DC Y+       TLCSCG GKDLP  F   +++A A G  P L +  +RAALSPL+ P      T   A       SG+ AD                     R V+YCSK+CQR+DWKSHK SC
Sbjct:  586 KAVSGEVALWGSLLPAAVERARQTYAHTADCIYSTPGYSGRTLCSCGMGKDLPPGFVESMRSAKAPGLVP-LHTCFHRAALSPLF-PAHEKLSTQFPA-------SGTAADGSRKCAQCGKSGKPLQCSRC-RKVAYCSKECQRRDWKSHKPSC 729          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.110e-25
Identity = 77/152 (50.66%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   16 GEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPTLCSCGKGKDLPWTFKLPIK-TANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSCG 468
            GE+ LW +L+P +VERARQTY H  DC++        +LC CGK KDLP  F   +K + NA G   PL SL YRAALSPLY P E          P       +     XXXXXXXXXXXXX  X   R V YCSK CQR+DWK+HK  CG
Sbjct:   65 GELGLWTTLLPVAVERARQTYAHAADCTHVGAEPPL-SLCGCGKAKDLPLPFVERMKKSVNAVGARLPLHSLFYRAALSPLYLPLEK--------HPMMLNEKKAPKXXXXXXXXXXXXXXXXLRXARCRRVVYCSKKCQREDWKTHKSGCG 207          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.330e-24
Identity = 66/154 (42.86%), Postives = 80/154 (51.95%), Query Frame = 1
Query:    4 QASTGEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPTLCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            +A +G + LW SL+PA+VERARQTY HT DC Y        TLCSCG GKDLP  F   +++A       PLQ+  +RAALSPL+   E            T   +   A D                    R VSYCSK+CQR+DWKSHK SC
Sbjct:  998 KAVSGGVALWGSLLPAAVERARQTYAHTADCIYPTPGYSGRTLCSCGMGKDLPPGFVESMRSAKLV----PLQTCFHRAALSPLFPAYEKLS---------TQFFASGTAADGSRKCAKCGKSGKPLQCSRCRNVSYCSKECQRQDWKSHKPSC 1138          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5MF73_9AGAR)

HSP 1 Score: 75.9 bits (185), Expect = 4.730e-13
Identity = 52/158 (32.91%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   19 EIDLWESLIPASVERARQTYLHTTDCSYNKLSDV---YPT----LCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTA--GVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            E+  W+ LIPA VER RQT+ H  DC Y K   V   + T    +C CG+GK++    ++P K+         L     R A+SPLYA + +       +T   A  G   SG  +                    + V YCS+ CQR DWK+HK  C
Sbjct: 1043 EMLAWKQLIPAFVERCRQTWTHRADCEYIKTGRVPLSFATGENPICQCGQGKEVEGLMQMPNKSWKN------LAPFCTRIAISPLYAVSYVESVVGNLSTFLAARSGSGSSGPREEEESCQKCGSQGKLMGCGRCKKVKYCSQTCQRNDWKAHKMQC 1194          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KGX7_HETIT)

HSP 1 Score: 72.4 bits (176), Expect = 7.570e-12
Identity = 47/152 (30.92%), Postives = 67/152 (44.08%), Query Frame = 1
Query:   31 WESLIPASVERARQTYLHTTDCSYNKLSDVYPT-------LCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            W+ L+PA VER R ++ H  +C Y   + +  T       LCSCG+GKD+    K+ + +         L   + R ALSPL+A + +     IG  P            H                   + V YCS++CQ+KDWKSHK  C
Sbjct: 1032 WKQLLPAFVERCRSSWTHGANCEYKSQNKIPLTEIMEADPLCSCGRGKDVEGMAKVALWSK--------LAPYVTRVALSPLFAVSYLET---IGRDPSA----------HRCYSCRGKGKPKIKTCKICKKVRYCSEECQKKDWKSHKRVC 1162          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=3 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6HBF3_9AGAR)

HSP 1 Score: 71.2 bits (173), Expect = 1.910e-11
Identity = 48/162 (29.63%), Postives = 73/162 (45.06%), Query Frame = 1
Query:    1 YQASTGEIDLWESLIPASVERARQTYLHTTDCSYNK-----LSDVYPT--LCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            +  S GE++ W+ L+P+ VER R  + H  +C Y       LS  + T  LC CG+GKD+     + +          PL +L  R A+SPL+A + +               +G+G +                     + V YCS +CQ+KDWKSHK +C
Sbjct: 1024 FSVSQGEMEAWKQLLPSLVERCRSGWTHGPNCEYASQGSIPLSQAFRTDPLCRCGQGKDVDEMLGVELWR--------PLAALSTRIAISPLFAVSYLEKIAKAR--------NGAGKE----CGMCNRRGGNMKACAACKKVCYCSVECQKKDWKSHKQTC 1165          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JU16_HYPMA)

HSP 1 Score: 70.1 bits (170), Expect = 4.810e-11
Identity = 51/157 (32.48%), Postives = 68/157 (43.31%), Query Frame = 1
Query:   16 GEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPT-------LCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            GE+  W+ L+PA VER R ++ H  +C Y     V  T       LCSCG+GKD     K+ + +  A          + R ALSPL+A + +     IG  P            +                   R V YCSKDCQ+KDWK+HK  C
Sbjct: 1024 GEMRAWKLLLPALVERCRTSWKHGENCEYRGQGKVPLTDMMEMDPLCSCGRGKDTEGMQKVALWSKWA--------PYVTRFALSPLFAVSYLET---IGRDPAR----------YRCFVCRAKGKPKLLMCTICRKVRYCSKDCQKKDWKAHKARC 1159          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MEM2_9AGAM)

HSP 1 Score: 70.1 bits (170), Expect = 4.810e-11
Identity = 51/157 (32.48%), Postives = 67/157 (42.68%), Query Frame = 1
Query:   16 GEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPT-------LCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            GE+  W+ L+PA VER R T+ H   C Y     +  T       LCSCG+GKD     K+P+ +  A          + R ALSPL+A + +     +G  P          D +                   + V YCSK CQRKDWKSH   C
Sbjct: 1027 GEMRSWKQLLPAFVERCR-TWQHGGSCEYRSQGKIPLTEAMEEDPLCSCGRGKDTEGMSKVPLWSLFA--------PYVTRMALSPLFAVSYL---ERVGRNP----------DAYKCSVCRKRGNPKIMTCGGCKRVRYCSKACQRKDWKSHSAKC 1161          
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6XGF5_9AGAR)

HSP 1 Score: 68.2 bits (165), Expect = 7.760e-11
Identity = 53/160 (33.12%), Postives = 66/160 (41.25%), Query Frame = 1
Query:    7 ASTGEIDLWESLIPASVERARQTYLHTTDCSYNKLSDV-------YPTLCSCGKGKDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGATPRTAGVSGSGADDHXXXXXXXXXXXXXXXXXXXRGVSYCSKDCQRKDWKSHKHSC 465
            AS  EI+ W+ L+PA VER R ++ HT  C Y     V          LCSCGKG+D+    ++         E   L     R A SPL+A + +       A  R     G G                         V YCSKDCQRKDWK+HK  C
Sbjct:  107 ASKVEIEAWKRLLPALVERCR-SWTHTEKCEYALQGRVPLSVEMERDPLCSCGKGEDVDGMHRV--------AEWTKLAPFAVRVAFSPLFAVSYLEKVGRDPAAGRCFVCRGKGKPKMMKCACGK--------------VRYCSKDCQRKDWKAHKPKC 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9903.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MYND-type1.490e-2743.23domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
MYND-type4.150e-2645.45domain-containing protein n=1 Tax=Ectocarpus silic... [more]
MYND-type2.110e-2550.66domain-containing protein n=1 Tax=Ectocarpus silic... [more]
MYND-type1.330e-2442.86domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
MYND-type4.730e-1332.91domain-containing protein n=1 Tax=Gymnopus conflue... [more]
MYND-type7.570e-1230.92domain-containing protein n=1 Tax=Heterobasidion i... [more]
MYND-type1.910e-1129.63domain-containing protein n=3 Tax=Tulosesus angula... [more]
MYND-type4.810e-1132.48domain-containing protein n=1 Tax=Hypsizygus marmo... [more]
MYND-type4.810e-1132.48domain-containing protein n=1 Tax=Botryobasidium b... [more]
MYND-type7.760e-1133.13domain-containing protein n=1 Tax=Mycena venus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9903contigH-canaliculatus_M_contigs9903:1466..1936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog5346.XP_001839538.1
PFAMsDUF4470,zf-MYND
Model size471
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-12
EggNOG OGs2BWBX@1|root,2SE9H@2759|Eukaryota,39W4I@33154|Opisthokonta,3P092@4751|Fungi,3V4H9@5204|Basidiomycota,228UR@155619|Agaricomycetes,3W8KA@5338|Agaricales
DescriptionDomain of unknown function (DUF4470)
Cds size471
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854233.7679875-CDS-H-canaliculatus_M_contigs9903:1465..19361696854233.7679875-CDS-H-canaliculatus_M_contigs9903:1465..1936Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9903 1466..1936 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9903.1.1prot_H-canaliculatus_M_contigs9903.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9903 1466..1936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9903.1.1

>prot_H-canaliculatus_M_contigs9903.1.1 ID=prot_H-canaliculatus_M_contigs9903.1.1|Name=mRNA_H-canaliculatus_M_contigs9903.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=157bp
YQASTGEIDLWESLIPASVERARQTYLHTTDCSYNKLSDVYPTLCSCGKG
KDLPWTFKLPIKTANANGEGPPLQSLMYRAALSPLYAPTEMACFTPIGAT
PRTAGVSGSGADDHSSKCAKCGKGGRAMKCARCRGVSYCSKDCQRKDWKS
HKHSCG*
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mRNA from alignment at H-canaliculatus_M_contigs9903:1466..1936+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9903.1.1 ID=mRNA_H-canaliculatus_M_contigs9903.1.1|Name=mRNA_H-canaliculatus_M_contigs9903.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=471bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9903:1466..1936+ (Hapterophycus canaliculatus Oshoro7m male)
TACCAGGCGTCTACAGGGGAGATTGACCTGTGGGAGTCGCTCATCCCCGC GTCCGTCGAACGCGCCCGCCAGACGTACTTGCACACCACGGACTGCTCGT ACAACAAGCTGAGCGATGTCTACCCGACTCTTTGTAGTTGTGGTAAGGGC AAGGATCTACCATGGACTTTTAAGCTACCCATCAAGACCGCCAATGCGAA TGGTGAAGGCCCACCCTTGCAGTCTCTGATGTACAGAGCGGCGCTGTCGC CTCTGTATGCTCCCACCGAAATGGCTTGCTTTACGCCCATCGGTGCGACA CCTAGGACCGCGGGCGTCTCTGGCAGTGGCGCGGATGATCACTCGTCGAA GTGCGCGAAATGTGGGAAAGGAGGTCGAGCGATGAAATGCGCTCGATGCC GTGGGGTGTCGTACTGTTCGAAAGATTGCCAGCGCAAGGATTGGAAGAGC CACAAGCATAGCTGCGGCTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9903:1466..1936+

>mRNA_H-canaliculatus_M_contigs9903.1.1 ID=mRNA_H-canaliculatus_M_contigs9903.1.1|Name=mRNA_H-canaliculatus_M_contigs9903.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=471bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9903:1466..1936+ (Hapterophycus canaliculatus Oshoro7m male)
TACCAGGCGTCTACAGGGGAGATTGACCTGTGGGAGTCGCTCATCCCCGC
GTCCGTCGAACGCGCCCGCCAGACGTACTTGCACACCACGGACTGCTCGT
ACAACAAGCTGAGCGATGTCTACCCGACTCTTTGTAGTTGTGGTAAGGGC
AAGGATCTACCATGGACTTTTAAGCTACCCATCAAGACCGCCAATGCGAA
TGGTGAAGGCCCACCCTTGCAGTCTCTGATGTACAGAGCGGCGCTGTCGC
CTCTGTATGCTCCCACCGAAATGGCTTGCTTTACGCCCATCGGTGCGACA
CCTAGGACCGCGGGCGTCTCTGGCAGTGGCGCGGATGATCACTCGTCGAA
GTGCGCGAAATGTGGGAAAGGAGGTCGAGCGATGAAATGCGCTCGATGCC
GTGGGGTGTCGTACTGTTCGAAAGATTGCCAGCGCAAGGATTGGAAGAGC
CACAAGCATAGCTGCGGCTGA
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