mRNA_H-canaliculatus_M_contigs989.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs989.1.1
Unique NamemRNA_H-canaliculatus_M_contigs989.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ0_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 5.520e-173
Identity = 226/281 (80.43%), Postives = 244/281 (86.83%), Query Frame = 1 
Query:    1 ELDEPYTDADEDRLLSFWDTRIEVDPCCDVILGEPLEITIWFRSDGNFSESIALYVDLPRLTTGTLGNMFNDSADINLGELDVSPSTLWRGAWEQGVFDEVSPYENSRLRMVLKPGRILDPKSDEDVFVRISKRNRISAFCGWAEDSVAFRLYTNSSEFEDETVEMSPRFGNGCRSDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQR 843
            ELDEPYTDADEDRL SFWDTR+EVDPCCDVILGEPLEIT+WFR+DGNF+ES ALYVDLPRLTTGTL N+FNDS DI LGELDVSPSTLWRGAWEQGV+DE SPYE SRL MVLKPGR LDP SDED+FVRISKRNRISAFCGWAEDSV FRLYTNSS+F +  +E SPR G+GCR+DC+ERGVCDYCHEAC CHEGQG+KT D+VDSGGWTR+DCADYVCPSGK WAARP  LEG G  SLE H L ECSGNG       CDR  ASC+C+ GFEGDACQR
Sbjct:   28 ELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTESAALYVDLPRLTTGTLENLFNDSTDIGLGELDVSPSTLWRGAWEQGVYDEDSPYEGSRLLMVLKPGRTLDPDSDEDMFVRISKRNRISAFCGWAEDSVDFRLYTNSSDFGEAIIETSPRLGDGCRADCFERGVCDYCHEACHCHEGQGDKTFDIVDSGGWTRIDCADYVCPSGKSWAARPTTLEGRGRASLENHGLEECSGNGS------CDRTDASCVCAPGFEGDACQR 302
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.870e-39
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 1 
Query:  391 ISKRNRISAFCGWAEDSVAFRLYTNSSEF------EDETVEMSPRFGNGCR--SDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            I ++N I  +CG  E+    ++   +S        E  +++ S R G+GC   SDC+ RGVCD+C + C+C+EG G  T D + +GG   +DC++ VCP  K +   P + +        AH LAECS NG      +C+R S SC C  GFEGDACQR SCP +CSGHG CLSM EL  +  A PL
Sbjct:   17 IYRQNGIKLYCGIGENDPDLKIRWGNSSLATGWFGEWMSIQSSTRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYGKDT-DTITAGGTISVDCSERVCPYAKAFGDVPYSTD-------SAHQLAECSNNG------ICERTSGSCQCFPGFEGDACQRRSCPNDCSGHGQCLSMAELVNAAAAHPL 189
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G565_9STRA)

HSP 1 Score: 150 bits (378), Expect = 6.500e-38
Identity = 101/282 (35.82%), Postives = 137/282 (48.58%), Query Frame = 1 
Query:  103 PLEITIWFRSDGNFSESIALYVDLPRLTTGTLGNMFNDSADINLGELDVSPSTLWRGAWEQGVFDEVS-PYENSRLRMVLKPGRILDPKSDEDVFVRISKRNRISAFCGWAEDSVAFRLYTNSSEFEDE----TVEMSPRFGNGCRSD--CYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            P+EI I F      S S  + V LPR T+G         A+I+ G    S +T     W++G +D  S P+ NS + M +K G  L   +    FV I K + I  +CG  E+     L+TN+S         +V +S + G+ C +   C E G CD+C + C C EG G     V   G    ++CA   CP G  +A  P       +G   AH   ECS NG      +CDR    C C +G+EGDACQR  CP +CSGHG CL++ EL    +ALPL
Sbjct:   91 PVEIQIQFVPAFTVSGSDLVKVSLPRFTSGDCKQ--TKGANIDYGSFYHSLTTFVDMRWDEGDWDYSSMPFANSSITMRVKEGMQLMAGTTY-TFV-IMKASGIKIYCGLEENWEKLMLWTNASGSTSRNAPVSVAISEQIGDACENLKLCSEHGTCDHCKQVCECDEGFGAVNDSVTKGGYPIAINCAMRTCPLGPAYADVP-------YGMYAAHQDTECSNNG------LCDRAEGFCECFDGWEGDACQRRPCPNDCSGHGRCLTLEELANEKEALPL 355
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.580e-32
Identity = 84/269 (31.23%), Postives = 130/269 (48.33%), Query Frame = 1 
Query:  166 VDLPRLTTGTLGNMFNDSADINLGELDVSPSTLWRGAWEQGVFDEVSPYENSRLRMVLKPGRILDPKSDEDVFVRISKRNRISAFCGWAE---------DSVAFRLYTNSSEFEDETVEMSPRFGNGCRSDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPLMNGSNI 945
            + LPR+T G      + +       + ++ +T +   W +G +    PY +++L +V+         ++  + ++I   N     CG  E         D     L T+  E  D T+ + P   N  +  C+  G CD C + C+C +G G+ T DV +   +   DC++ VCP G+ W   P        G+  AHA AECS  G      VCDR +  C C  GF G+ACQ+  CP +CSGHG C++MHELG  + ALPL++ S +
Sbjct:  103 IALPRMTCGA----GDGTPGTPPSTIQMTHTTYFTPTWTEGTYSYADPYPDTKLELVVDRAMA----ANTQLSIKIDADNGFMFHCGINENEGIKISVTDDALGALVTD--ELMDHTM-VGPACTN--KGTCFGHGTCDACRDKCVCDDGYGS-TSDVYEI--YVFPDCSERVCPKGRAWGDVPT-------GATAAHADAECSNRG------VCDRTTGICACVAGFGGEACQKKLCPNDCSGHGLCMNMHELGGISRALPLVSSSQV 342
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.430e-23
Identity = 59/152 (38.82%), Postives = 74/152 (48.68%), Query Frame = 1 
Query:  487 TVEMSPRFGNGCRSDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPLMNGSN 942
            T      FG    ++C   GVC      CLC+EG G  +    D   +   DC+  VCPSG  W   P            AHA  ECSG G      +CDR S  C C  GFEGDACQR +CP  CSGHG C+S+  +    +ALPL + ++
Sbjct:   30 TASTVSAFGCDQHNNCNGHGVCSQQDAVCLCYEGWGADS----DISLYKAQDCSARVCPSGPAWGDVPT-------AKYTAHAALECSGMG------LCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNAH 164
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D842_CAFRO)

HSP 1 Score: 103 bits (256), Expect = 6.430e-22
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 1 
Query:  526 SDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            ++C   G CD  +  C C +G G+++    D   +   DC+  VCP+ K W   P        G+  AH  AECS  G      +CDR +  C C  GFEGDACQR+SCP  CSGHG C+SM ++    +A P+
Sbjct:   26 NNCNSHGTCDETNRVCRCFDGFGSES----DLAVYKAPDCSQRVCPADKAWVDIPT-------GATTAHNNAECSNAG------ICDRGTGRCRCFAGFEGDACQRSSCPNGCSGHGKCVSMSQMAGEANAFPV 142
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5N1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.300e-22
Identity = 64/168 (38.10%), Postives = 83/168 (49.40%), Query Frame = 1 
Query:  430 AEDSVAFRLYTNSSEFEDETVEMSPRFGNGCR--SDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            A  S   R + + +   +E+  +    G GCR  +DC   G C      C+CH G G  T DV D   +   DC+   CPS   W+  P +       SL    + ECSG G      +C+R S  C C  G+EG ACQR SCP  CSGHG C+S+ E  +ST ALPL
Sbjct:  387 ATGSYIVRTFDSYNNILEESANIG---GVGCRFLNDCSGHGDCTLMSSTCVCHPGFGAST-DVTD---YKAPDCSLRTCPSDLAWSDVPTSK------SLAHQTVLECSGRG------LCNRTSGLCQCVPGYEGSACQRTSCPKNCSGHGRCMSISEWSRSTSALPL 535
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: EGF-like (domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZA2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.460e-21
Identity = 60/152 (39.47%), Postives = 78/152 (51.32%), Query Frame = 1 
Query:  481 DETVEMSPRFGN-GCR--SDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            +  +E S   G  GCR  +DC   G C      C CH G G  + DV +   +   DC+   CPS   W+  P +       SL    + ECSG G      +C+R S +C+C  G+EG+ACQR SCP  CSGHG CLS+ +   ST ALPL
Sbjct:  395 NNVLEESANIGGVGCRFLNDCSGHGDCTLMSSTCTCHPGFGASS-DVAE---YKAPDCSVRTCPSDLAWSDIPSSA------SLAHQTVLECSGRG------LCNRTSGTCLCVPGYEGNACQRTSCPNNCSGHGRCLSVSDWSASTSALPL 530
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0Q6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.540e-21
Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 1 
Query:  502 PRFGNGCRS--DCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            P  G  C +  DC   G+C+   + C C +G G+      D       DC+  +CPSG  W++ P        G+  AHA++ECS  G      +CD  +  C C  GF G AC+R SCP +CSGHG C+SM  +   T+A+PL
Sbjct:   22 PLLGELCNALNDCNGHGICNTQTKVCSCVDGWGSAN----DISTRKSADCSQRICPSGPSWSSVPT-------GATTAHAVSECSDMG------ICDPATGQCKCFPGFVGAACERTSCPNDCSGHGICVSMRVMATMTNAMPL 148
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Match: EGF-like (domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2RIA7_PHYPN)

HSP 1 Score: 99.0 bits (245), Expect = 2.770e-19
Identity = 59/151 (39.07%), Postives = 79/151 (52.32%), Query Frame = 1 
Query:  487 TVEMSPRFGN-GCR--SDCYERGVCDYCHEACLCHEGQGNKTVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAH-ALAECSGNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHELGQSTDALPL 927
            T+E S   G  GC   +DC   G C    + C+C  G G+ T DV +   +   DC+  VCPS   W + P +       +  AH  L ECSG G      VCDR + +C C  GFEG AC+R SCP +CS  GTC+SM  +  + +ALP+
Sbjct:  541 TIEESSTVGGEGCTYVNDCSGHGTCTLLSKVCICSIGWGSPT-DVAE---YKSPDCSTRVCPSNFAWNSIPTS-------TTTAHDILVECSGMG------VCDRAAGACKCFPGFEGSACERMSCPNDCSDRGTCMSMRSMAAAKNALPI 674
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs989.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
EGF-like5.520e-17380.43domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical2.870e-3942.25protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical6.500e-3835.82protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.580e-3231.23protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
EGF-like5.430e-2338.82domain-containing protein n=1 Tax=Tribonema minus ... [more]
Uncharacterized6.430e-2238.81protein n=1 Tax=Cafeteria roenbergensis TaxID=3365... [more]
EGF-like8.300e-2238.10domain-containing protein n=1 Tax=Aphanomyces inva... [more]
EGF-like2.460e-2139.47domain-containing protein n=2 Tax=Aphanomyces asta... [more]
Uncharacterized2.540e-2136.81protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
EGF-like2.770e-1939.07domain-containing protein n=20 Tax=Phytophthora Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs989contigH-canaliculatus_M_contigs989:1..7934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCI8
PFAMsEGF_2
Model size945
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue3.49e-27
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_001570.1
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
Cds size945
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs989.1.1prot_H-canaliculatus_M_contigs989.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs989 1..7934 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854232.9253216-CDS-H-canaliculatus_M_contigs989:0..1011696854232.9253216-CDS-H-canaliculatus_M_contigs989:0..101Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 1..101 -
1696854232.9415927-CDS-H-canaliculatus_M_contigs989:4062..41271696854232.9415927-CDS-H-canaliculatus_M_contigs989:4062..4127Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 4063..4127 -
1696854232.9550557-CDS-H-canaliculatus_M_contigs989:4601..47281696854232.9550557-CDS-H-canaliculatus_M_contigs989:4601..4728Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 4602..4728 -
1696854232.969697-CDS-H-canaliculatus_M_contigs989:5078..52061696854232.969697-CDS-H-canaliculatus_M_contigs989:5078..5206Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 5079..5206 -
1696854232.9838111-CDS-H-canaliculatus_M_contigs989:5543..56981696854232.9838111-CDS-H-canaliculatus_M_contigs989:5543..5698Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 5544..5698 -
1696854232.995251-CDS-H-canaliculatus_M_contigs989:6095..62241696854232.995251-CDS-H-canaliculatus_M_contigs989:6095..6224Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 6096..6224 -
1696854233.0060074-CDS-H-canaliculatus_M_contigs989:6738..68001696854233.0060074-CDS-H-canaliculatus_M_contigs989:6738..6800Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 6739..6800 -
1696854233.0164278-CDS-H-canaliculatus_M_contigs989:7756..79341696854233.0164278-CDS-H-canaliculatus_M_contigs989:7756..7934Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs989 7757..7934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs989.1.1

>prot_H-canaliculatus_M_contigs989.1.1 ID=prot_H-canaliculatus_M_contigs989.1.1|Name=mRNA_H-canaliculatus_M_contigs989.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=315bp
ELDEPYTDADEDRLLSFWDTRIEVDPCCDVILGEPLEITIWFRSDGNFSE
SIALYVDLPRLTTGTLGNMFNDSADINLGELDVSPSTLWRGAWEQGVFDE
VSPYENSRLRMVLKPGRILDPKSDEDVFVRISKRNRISAFCGWAEDSVAF
RLYTNSSEFEDETVEMSPRFGNGCRSDCYERGVCDYCHEACLCHEGQGNK
TVDVVDSGGWTRLDCADYVCPSGKVWAARPQNLEGGGWGSLEAHALAECS
GNGRRDTGFVCDRRSASCICSEGFEGDACQRNSCPMECSGHGTCLSMHEL
GQSTDALPLMNGSNI
back to top

mRNA from alignment at H-canaliculatus_M_contigs989:1..7934-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs989.1.1 ID=mRNA_H-canaliculatus_M_contigs989.1.1|Name=mRNA_H-canaliculatus_M_contigs989.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=7934bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs989:1..7934- (Hapterophycus canaliculatus Oshoro7m male)
GAGCTGGACGAGCCTTACACCGACGCCGACGAGGATAGGCTGCTTTCGTT
TTGGGATACAAGGATAGAGGTAGACCCTTGCTGCGACGTCATTTTGGGGG
AGCCGCTGGAGATCACTATCTGGTTCAGAAGCGATGGCAACTTTTCGGAG
TCGATTGCTCTCTACGTCGACCTGCCCCGTGAGACTTTGTTTCGTATGTT
TTCAGACCTGTTTGAAAGGGGTGCTTCACTCTCCAGAAGTATTTTCGTAC
TTCGGAGAATGTGAACGATGTCACCTGGCGACCACGCATGCTGATGGCAA
ATGGATGGTGCCGCAACCCGATGGTTGGGTCTGGAGTGCGTGGAACATGC
AGGTGGTACATTTCGCGCGCTTGGACCTTCAGCGCCGGTGGAAAGCGATG
CCGTCGCAGAGGGCGCTCGAGAATAATCATGGGTGTTGCCATGCCTGCAC
AAATATCACGAGCTCCACAGAATGTTCCGACGGTTGTTGCTCCATAAAAG
TGCTGTGTAAGAGATTCCCGCGATCTCCTGGAGCTTCTGACTGCTGGCCT
TCAAGGCAACGAAATGACTGCACTGGTTGTCCCAGCTTCGCGAAAACAAA
AATTAAGTTCAGCCTGAATTTCCTCTTCCCCATCCCATTCATCTCCTAAA
ACCCACCTCTCTGTGTTTGTCCATCCCCCATCCTACGTTTCTCACGTCTT
TGTCCGCAACTTTTAACATTTTTGTCCATATCTTGCCTACTGATATATAA
TTTCATCCTGTCACTCGAATGGAACCCTCACTGAATGGAGTTGACAAATG
CCCCTTGAGATGGACAGTGTCTCAGGTGGGTATTCCTTCGGTGTTATTGA
CTTGTTCTATACAAACTTAAGTCAGCCTGAATTTCCGGCAGGGTTTGTTG
TCTCCTCGGGGACGCAGATCGATCTGTCGCAAGGTACCTCGAAAGCGATC
AAGCATGATGATATGGATAAGGAGTAGTGCATCCGTCGTTCTGGCCTCAA
AGACTGGTTTCTACTTGACCGATGTCAGAAATCCTTCCGTCTGTTGAGAT
GTTTCTTCCTATGACGGCGCTCTCCTTCGAAATTTCAAATGATTCCCGAC
ACGCTTGCGCCTCGATTCATTCGCTCGGGTGAAGGACTAACAACTGGGAC
GCTTGGGAACATGTTTAACGACAGTGCCGACATCAATCTCGGCGAGGTAC
GTTAATGAAGCGCTGGTACCGGCGAGCATGGCCATCGCATGTAATCGTTT
TAACTGAACGCAACAGCAAGCATGTGTAACAGTAGCTTATTACACGTAGC
CGCCATGCGCGAGTAAGCGACGCATGGCTTATGTTCACATGGTTGCAAAA
ATGTTTTTGGGTACACCTAAAACACACGAACAGTGGATCGAATCGTGTTC
ATCTCGAGATCACCCCTGGCAGCGTGCACGGAGTCCAGCGCTCCGTGATT
GAGTGGACCTCGACTAGAAGCGAAATTGTAGGCCTTGAAAGTATCAAGTT
AAAGTTGAGCGGCCTGGGCGAGTGTCGAGCGGTCGGAGTACACAAGGGCC
ATGGATCTATCTTACACGTGTGTGAGCACGTCGTCCCGATGTCGTTCACA
AGTGTTGTTTGGGTACTTTAGTGCCGCCTGGAAGGCTTTATTTGTGATTC
TCTCCCTCTTGCCCGCAGCATACTAAAACTAATCAACAATGCACCTTTAT
CCTTGGCCAGCTGGACGTCAGCCCATCAACTCTCTGGAGAGGCGCGTGGG
AGCAGGGGGTTTTCGATGAAGTTTCCCCCTACGAAAATTCACGCTTAAGA
ATGGTGTTGAAGCCTGGTCGGATTCTTGATCCCAAGTCGGTGAGAAGCCT
GGAGTTTCACCCTGTGGTATTTCGGATTGTTTTGACTAAACGTTGACACC
AGGGCCGACTCCTGGAGGTGGCGAAGTACTTACGCATTTTGCAGCCCTGT
CAGAACATTTGCGTCATTGTGGAAGATGGGAAGAAATAACCATTCCTTAA
ACCTTCACACCATCTTCATTTTTTCCACCACCCGCCGTTGAGTAAACGGA
TGCCGGCAATGCCAACACCGTACCACGTATACACCGTATGCTCTTGAGGA
ATAGACGCTTTTGCATGGGCAGAGGACGACCTCTTTACACACGCGAGTTC
ATCGCGATAGGCTGGCCGCACAAGATGCGATCATGTCCTGATTCTTGCGT
ATCGTATCTATGTCTGACGGCCACGATAACTCGAAGGATGAGGACGTGTT
CGTGAGAATATCTAAACGCAACCGTATCTCTGCCTTCTGCGGGTGGGCGG
AAGATTCGGTAGCCTTTCGTCTCTACACCAACTCCTCCGAGTTCGAGGAC
GAGACAGTCGAGATGTCACCGCGATTCGGGAACGGATGCAGGTGTGCCAT
GACTCTATTGTGACAAAAAGTTTGCTGGAGTGCCTGGCGGTGGTACTACT
ATGCCAGATATTCAACTGAGGCGAGAAAAGAGGATGCAGATAGACTTACT
TGTGTTTCATGCACTTACTCGGTGTGGTACATCGAGACTCCTCGCTTGTG
TAGACATGTAGACATTTTTCCAGGTTACGTCATAACTGGTTTTGACCTGA
GAGACCATATCGACCACCAATTCGCTGGATGATGAATCAAACTTACACTT
CCGTGCTTGCCCTTCCATGCAATAGATATTAATCGTTGAGTGCACACCTT
ACCCTTGAATTAACTGACGTGGGCGTAGATCAGACTGCTACGAGCGAGGA
GTATGCGACTACTGCCACGAGGCCTGCCTTTGTCACGAAGGCCAAGGGAA
CAAGACCGTGGATGTGGTGGATAGCGGGGGTTGGACACGTCTGGACTGCG
CGGATTGTAAGAGGAGCACTAACCAAGCGAAAATCTAGCTTTGCCTCGGG
AATCCGGGAGGGCATCATACAAACGTGTCATCGTTCGCAAGTTTCGCCCG
GGGACAAAACGGGGGGGGGGGGCGAGGGCACATCGTAGCTTCGACCGGGC
CTTACTTTTGCTGGGTTGCTGGGCGTGCGATGGATCAGGTTCAGCCTCTG
GCTGGCAATCCAGTTGCTGGGCTCATGGGATTGGGGGATGCAGGCGACTT
TAGTTTCACCACATACTGCCTGACTGTCCATGCAACGGCTAAATTTCTTC
CACCGAACGCCCTCATGCCCTGTATGACGTGTTTCTCAAAATTCTCCACA
TCAAAGACGTGTGTCCTTCCGGAAAGGTCTGGGCAGCACGGCCGCAAAAC
TTAGAAGGCGGAGGATGGGGATCTTTGGAGGCCCACGCACTGGCAGAGTG
CTCGGGGAACGGCAGGCGAGATACGGGTTTTGTGTCGATTTTTTGCCTTT
AGACCTAACTTAACCCCTTCGGTGATCGGGTGCAATTGTACAGTTCAATA
TTTTCTTCGAACAGACACAAGTGACAGAAAAGGTGTTGCCATGGGTTTTC
ACTGGACTTTTGTGTGGAAGTTACTCGGTGACGTACTTGGTCGCACCGAA
GACGCGAATCCACACCTTTATTTCTCTTGGATTCGTTTTTCGCTCGGACA
TGGGCGGGGCACCCTCATGATAGGCAGCAAACAATGTCCATGCATCTGTG
TGTTTTTGTTCAAGGATCCATGAGATTAAAGATTAAAGTCGCCAACAGGT
TGTGTCTGCGAACAACTTTTTTGCCCAAGTTGTTGCCCCTCGCATACTGA
CGTTCGTCTCTGGGCTGTCTTTTTCCTGTCAAGTTTTTCCAACCGCATTT
GCACGTTCGCCCTTCGTTTTTTGTCGAATACGATTGGCTCGCTCTTTATC
ACCACAGCTGCGACCGGAGAAGTGCATCGTGCATCTGCTCCGAGGGCTTT
GAAGGCGACGCCTGCCAACGAAGTGAGCCAAAAAGTCGTAATTTTCATCT
ACTGCATCACTTTGCTTTGTACACAATTTATTTTCGTTGCCGCTTTGAGT
TTGCTTGGATTTGCCCTAGCTCGTGGCTTTGAACACCACCGATGGCCCGC
ACGCTTTGTACACACATCTTCTTGTTCCGAGTACTGTACCAGACTTCGAA
ACCCGTTGCCCTTGGTCACCGCACAGGCGGCACAGCGGTACATTTCGTGC
TGCAGCCCTCACATGCGCCACGCGCCCTCCCCGCGTAAGCTTCAGCCTCA
GTCTCCACACAACCTCGCAAGCGCGATATCCTGAAGCAACATATTTGTGC
TCCGCGCCAGATGGCGTCTCTTCTCTCCCTAAAAAATACGAAGTCAACAA
GCAACCCAGCCACTACGAGTAAGAAGGCGAACCCCGAGGTCGTCTTCAGA
GTGCGGTAACCCGGTGTACCTGTGACCCTCCATCGCCCTCCCCTTTCCCA
TCACTTCAAAACCTTCAACATCCGGCATCCTGTACCAATGCGAGCGCCTC
GCTCCATCTACCCTCGAGCGCTAGCGCCTCCACTTTCTTTGGAACGCTCT
GGTCTCGTCCTACATCGACACTACCATCGTTGGCACTGGCATCAGCATCA
GCTTCAGCATCAGCATCAGCATCAGCATCAGCGGCCATCGCCATCGCTGC
ATCTCGAACCAAAGACAGCGCTCGCTCCCACTCTCCGCCGGCCGCACACG
CGTCGAGCGCCGCTCGACAAGTCGCCGCGGATGGCTCGTGTTCCTCTCTC
GCCCACATGGTCTCCACCGTAGCCAGGGCGGCGTCCGCCGTCCTCGCTGC
TGCTTGCATGGCTGATATAGCATCCTTACCAGCAGCACTTGTTCCAGCCG
TAGCAGGAGACTGGCGCTGAGATTTTGCCGCCGCGGTGCTATCCGATGGT
GGTTGATGCAGCTGCGTCCTGTTGCCGCTGCTCCTAGGCGCTGCTTCGGG
AAGTTTCCCGAACAATGGTGGTGCTTGCGACGGGGGTAGCTCATCATCCG
TCGCACCTGGAATGCCTGTGGATAGAACGTGCGAGACGGAGGTTTGGGGG
CGGATTCAACACGCGGTAGCAAACAATACACATACATTTAAGGAACACAA
GTGGCAAGAAGCAACGATGCGGTGTAAAAGTTTCAAAATGCATGACGACT
CCAGCCGCAGTGTAACCAGCATGCCTGGGGAAACAGTCGCCCGTAAACTC
TTTCGTGGCGGTTAGAATATAAAAACACGCTGTACCTGTGTGTACCACAT
GCTGCAACATCGACGCGACACATGAACATATTAGCAAACCTGGTTAGACG
CATGGCTCGCGAACGCCACGTGGCAGTGGAGCGTGGGACACACGCCGCCA
AGAGCTTTAGATCAGCCTGTGGTGACCTTCACATTGCCAACAACAATGGC
ACCGCAATCGCGCCCGAACTAGGTTACACCACGTAACTTGGCCAGCCGAC
TCGTGCCAACATTTCAGCTCCGACCTGGTCATTCCTCGCACCTGGCATAA
TCTTCAGGCCCTTCGCCTTCATCTCCTGGAGAAGGTAGTCGACGTGTCTC
TCTTCTCCCGCCCATCGGCATTCCGCCAGCGCGGCCGTGTATACGACGGC
GCCTGGTTGGACCATCTCTGCCTTCATCTGGCAAACGTGGTCGTGGTTCA
AGTGTCCAAGTCCGAGGGTGCGCTTTGTAGGTTGAGGGGGTCATCTACAG
GGAGTGACGTTCTCTACAGGTACAGCACTGATCGACCCTTTTCGTGTGAT
AGTCAAGGCTGTCTTCACGTACTCTTGTACGGATTTTCCTGCAATGGTAG
AGCCGTCTCCCGGGTACGATCCACCCAACTGGGACAATCTCCGTGGAGCG
CGTGGGAGGGCTTACAGAACTCACCACAATTCCGGAATGACACGGTAATC
TCAATGGATTTTGCGATGCTCAGGGTTACAGGAGACAAGCCTTACAGAAT
TCACAGCACCATCGAGAGCGAACGCAGTCAAGGCTGTACGATTCTCAGTA
GATGGCAGGGGATACAGAAACAAACACAAGTCATACATCGGATTTTTTCG
CAGGGAACACACGTGCAAATCATCACTGACGTGCGCGACGCGGATACATA
TCAAGTTGGGAGCCAGACGGTCTTGAGTCCACCGGACGCAAGAGTGAAAG
TGACAACTATCTCACGGGGCGGGCGCGGATAGCTACGGCAATGGCAGCAA
AACATGATTACATTCATGCCAGCTTTGGTGTTCAACCTTGCCCAGTAAGA
ACCTCAAGCGTATGATACCGTTGAAAAAATGCACCAAAGCAGTGCAACAG
CAGAAGCTTGCGAGCTCTCGAATGTAGCTTGCTGGCTTCGCTTTCTGCGT
CGGCAACCAAGGCTCTCGACGAAGCAGTGCGACCACGAAGCCAAGATATT
TACAGCGCCCACCGGAACAGCGATGTTGTCTTTATACGAACGTTTCCGTT
TCCGTTCTCTTTCACCCCAACAAAAACCTATCTGATGGTTCTCGAACGGA
TCACGGATCCCGTACCTACGGCATACCTAGCCGCTGGCGAATGTTTGGAA
TGCTTCATTTCAATAACCACTTTCACGTCTCTCGGTTGACAGTGAATCTA
TGAGGGTTCGCTCCCAAGATCATCCGAATGACAGCAGTGGCGACGTTGAA
CGCAATAGGCCACAAGTGCAATTGCGCCGCATCTTCAGCAGACCGAATGC
CTCACGTGTTGGGCCTCAGGTACCCTTTATAGACCTGAGAGAGACTTCGG
CAAAGCTTACCTCTTCAACGAGAAAGAGCGCCAGCTCCCATGGGACGACA
CTCTGTCCCCCGAAAGCTCGAGTCGACCCAATGGCCGCGGCATCGCTGCT
GTAACTCAAAAACCGCCCCGTTGCAGCATGTTGAACTTCCCGGAAGGTGT
TCAGGAATGGATTGCCGCCCGAAGCCGCGGAGCCCTGAGGCGGCAAGACA
CGGCATGCCCTCATGGAGGAGAACAGGTGCTGCAAGTGCTTCGGTGCAGC
CCTTCTCGCAATAAGCATCTTGCTGGATGACGCCGTTCTGCCTGTGTTGC
TGTTGGGAAAAGCTGCGCGGCATGTCGCTCTGGAGACCATGCAGACGAGC
TCATGTTTCCGTTTCCACGCTCTCGACGAAGCCGGTCTTGCCTGTTTGAC
CCGAAACTTGCACGCCATGGCCAGGGCTCGAAGCTGAGAACGGGTGGAGA
CTAGGCAGGAGACTTGTCGTATTGCGTGCGAGGTTGGGCGCATCTTCGAG
CCAGCGGTTGCAAGCTTACAAGCATATTGTGGGCAGGAAAAAAACAGAAT
TCTACGTCCGCTGTTTCGCGGCGACGTGACCCCTTGGGTGGACATTGGGA
GTTACACTAAAAACCCATGAAAAGCCACTGCGCTACGTACATCAGTACAG
CGGCACCTGTACAAATGGGTCTCACACTTCCATTGATTGCACTTTGCACA
CACGGTGGACTTCGCATGCTTCCCTCACCTGCGGCTGGACTACACAAACA
TGGTACAGCGCGCGTCCACGCGTCCATCAAACAAACGAGACACATCTGCC
GCTACAATGGATTTCATTCGCCTCCGTTTAGATCTAAAATTGCAGTTTGT
AGTCTTCATATCTACCGGTATGTAGGACCGCATGGCCGCACAACTCCATT
GGAACTTCGACGTGATGAGCGCGAGCAAATCAACACCACACCTTGGTCCA
CACAATGATGAACGTGACAGAATTGTCTCGCCGCGCAATTTAATACATTC
CGCGACCGGATCGCCGAATATATCGTCGACGTCGCCTTGGCCGCTCCAAC
TACAGCAGCAGTAGTACGTCCATAGACCATCGAAAGCATGAACAATCCCC
CCCCTCTCTCTCTCCATAGAAGTTGCCCTTGACCAAAATATCTACAGTAA
TAACCAGGTGCATGCATCATTCATTCTGTGCAGATTCCTGCCCGATGGAA
TGTTCCGGTCATGGGACGTGTCTGAGCATGCATGAGTTGGGCCAGTCTAC
CGATGCTCTACCGCTCATGAATGGATCCAATATA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs989:1..7934-

>mRNA_H-canaliculatus_M_contigs989.1.1 ID=mRNA_H-canaliculatus_M_contigs989.1.1|Name=mRNA_H-canaliculatus_M_contigs989.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=945bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs989:1..7934- (Hapterophycus canaliculatus Oshoro7m male)
GAGCTGGACGAGCCTTACACCGACGCCGACGAGGATAGGCTGCTTTCGTT
TTGGGATACAAGGATAGAGGTAGACCCTTGCTGCGACGTCATTTTGGGGG
AGCCGCTGGAGATCACTATCTGGTTCAGAAGCGATGGCAACTTTTCGGAG
TCGATTGCTCTCTACGTCGACCTGCCCCGACTAACAACTGGGACGCTTGG
GAACATGTTTAACGACAGTGCCGACATCAATCTCGGCGAGCTGGACGTCA
GCCCATCAACTCTCTGGAGAGGCGCGTGGGAGCAGGGGGTTTTCGATGAA
GTTTCCCCCTACGAAAATTCACGCTTAAGAATGGTGTTGAAGCCTGGTCG
GATTCTTGATCCCAAGTCGGATGAGGACGTGTTCGTGAGAATATCTAAAC
GCAACCGTATCTCTGCCTTCTGCGGGTGGGCGGAAGATTCGGTAGCCTTT
CGTCTCTACACCAACTCCTCCGAGTTCGAGGACGAGACAGTCGAGATGTC
ACCGCGATTCGGGAACGGATGCAGATCAGACTGCTACGAGCGAGGAGTAT
GCGACTACTGCCACGAGGCCTGCCTTTGTCACGAAGGCCAAGGGAACAAG
ACCGTGGATGTGGTGGATAGCGGGGGTTGGACACGTCTGGACTGCGCGGA
TTACGTGTGTCCTTCCGGAAAGGTCTGGGCAGCACGGCCGCAAAACTTAG
AAGGCGGAGGATGGGGATCTTTGGAGGCCCACGCACTGGCAGAGTGCTCG
GGGAACGGCAGGCGAGATACGGGTTTTGTCTGCGACCGGAGAAGTGCATC
GTGCATCTGCTCCGAGGGCTTTGAAGGCGACGCCTGCCAACGAAATTCCT
GCCCGATGGAATGTTCCGGTCATGGGACGTGTCTGAGCATGCATGAGTTG
GGCCAGTCTACCGATGCTCTACCGCTCATGAATGGATCCAATATA
back to top