mRNA_H-canaliculatus_M_contigs9875.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9875.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9875.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L362_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 7.200e-89
Identity = 125/145 (86.21%), Postives = 133/145 (91.72%), Query Frame = 1 
Query:  442 LVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQILQ 876
            ++YVCNNASWAIGEIANA  +EVV PWVPGIMSRLVDII +KT DPKLVENVCITVGRLGSACPE+LAPDL RYCSDWCEGLTMVRD  EKEAAFKGLCLVIRHNP G+LDSLGSFCRAVGSWH+PDPE  VPPELA AF+QILQ
Sbjct:    1 MLYVCNNASWAIGEIANAVNREVVAPWVPGIMSRLVDIIGQKTADPKLVENVCITVGRLGSACPETLAPDLPRYCSDWCEGLTMVRDRTEKEAAFKGLCLVIRHNPSGILDSLGSFCRAVGSWHDPDPEMTVPPELAEAFQQILQ 145
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BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Transportin-1 (isoform X2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I1U3_PARCT)

HSP 1 Score: 248 bits (634), Expect = 7.600e-78
Identity = 126/289 (43.60%), Postives = 179/289 (61.94%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQIL 873
            D+D+ L P LECL+S+  A+      Y +P+F RC+ L E TL    A+     QVE P+K+FM+ +LDLLSG++EGL +     +  SN+L +L QC  DE  EVRQS+FA++G+L+K+C  H+K  +   +  L RNL+   E + VCNNA+WAIGEI+    +E  KP+V  ++S L+DII++  T   L+EN  IT+GRLG  CP+ +AP LA +   WC  L  +RD  EK++AF+G+C +I  NP GV      FC AV SW +P P+      L   F +IL
Sbjct:   13 DEDKDLFPLLECLSSVATALHSGFLPYAEPVFQRCVSLVEKTLAQSLASTANPGQVEAPDKDFMIVALDLLSGLAEGLENNIEQFVVRSNILSLLYQCMQDEMPEVRQSSFALLGDLSKACFKHVKPCIVDLMPVLGRNLNP--EFISVCNNATWAIGEISIQLGEET-KPYVSLVLSSLIDIINRAHTPKTLLENTAITIGRLGLVCPQEVAPMLAHFVRPWCTSLRNIRDNEEKDSAFRGICNMINVNPGGVAQDFIFFCDAVASWISPKPD------LKETFHKIL 292
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BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Putative (nuclear transport receptor karyopherin-beta2/transportin importin beta superfamily (Fragment) n=2 Tax=Arachnida TaxID=6854 RepID=A0A023GKS3_AMBTT)

HSP 1 Score: 246 bits (629), Expect = 4.270e-75
Identity = 124/289 (42.91%), Postives = 182/289 (62.98%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQIL 873
            DDD+ L P LECL+S+  A+      Y +P+F RC+ L E TL  + A      Q E P+K+F++ +LDLLSG++EGL     +L+ SSN++Q+L QC  D   EVRQS+FA++G+L K+C  H+   +  FL  L +NL+   E++ VCNNA+WAIGEI+    +++ KP++P ++++LV II++  T   L+EN  IT+GRLG  CPE +AP L ++   WC  L  +RD  EK++AF+G+C +I  NP GV+     FC AV SW NP  +      L   F +IL
Sbjct:  176 DDDKDLFPLLECLSSVATALQSGFLPYCEPVFRRCVSLVEQTLNQNMANAAHPDQFEAPDKDFVIVALDLLSGLAEGLNGHMESLVMSSNIMQLLYQCMQDLMPEVRQSSFALLGDLTKACFQHVNPCISDFLPILGQNLNP--EIISVCNNATWAIGEISVKLGRDM-KPYIPMVLTQLVTIINRPNTPKTLLENTAITIGRLGYVCPEEVAPMLQQFIRPWCSSLRNIRDNEEKDSAFRGICSMISVNPGGVVHDFIFFCDAVASWVNPKAD------LKQTFHEIL 455
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: transportin-1-like (isoform X1 n=7 Tax=Asteroidea TaxID=7588 RepID=A0A8B7Y5Q3_ACAPL)

HSP 1 Score: 255 bits (652), Expect = 4.540e-75
Identity = 122/274 (44.53%), Postives = 181/274 (66.06%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPE 828
            D+D+ L P LECL+S+  A+      Y +P++ RC+ LTE TL   AA+D    QVEPP+K+FM+ +LDLLSG++EGL      L+  SN+L +L QC  D+  EVRQS+FA++G+L K+C  H+K  +  FL  L +NL+   E + VCNNA+WAIGE++    +E+ +P++  ++++L DII++  T   L+EN  IT+GRLG  CP+++AP L ++   WC  L  +RD  EK++AF+G+C +I  NP GV+     FC AV SW NP+ E
Sbjct:  581 DEDKDLFPLLECLSSVATALQSGFLPYSEPVYQRCVSLTEKTLAQIAASDARPDQVEPPDKDFMIVALDLLSGLAEGLEGHIEKLVERSNILSLLFQCMQDKMPEVRQSSFALLGDLTKACFKHVKPCIADFLPVLGQNLNP--EFISVCNNATWAIGEVSIQMREEM-EPYISLVLTQLTDIINRPNTPKTLLENTAITIGRLGLVCPQAVAPMLPQFIRQWCTSLRNIRDNEEKDSAFRGICSMINVNPAGVVQDFIFFCDAVASWQNPNQE 851
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1I188_RHOPR)

HSP 1 Score: 244 bits (622), Expect = 5.890e-75
Identity = 120/289 (41.52%), Postives = 178/289 (61.59%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQIL 873
            DDD+ L P LECL+S+  A+      Y +P++ RC+ L E TL  H A  Q   Q + P+K+FM+ +LDLLSG++EGL      L+ +S+++Q+L QC  D   EVRQS+FA++G+L K+C  ++   +  F+  L +NL+   EL+ VCNNA+WAIGEI+   E   ++ +VP ++S L+ II++  T   L+EN  IT+GRLG  CP  +AP L ++   WC  L  +RD  EK++AF+G+C +I  NP G++     FC AV SW NP  +      L   F +IL
Sbjct:   97 DDDKDLFPLLECLSSVATALQSGFLPYCEPVYKRCILLIERTLYQHIANTQNPEQFDAPDKDFMIVALDLLSGLAEGLNGQIDKLVQNSSMMQLLYQCMQDPMPEVRQSSFALLGDLTKACFQYVHPCISDFIPILGQNLNP--ELISVCNNATWAIGEISIKLESNELRSYVPLVLSHLIFIINRPNTPKTLLENTAITIGRLGYICPHEVAPQLQQFVRQWCISLRNIRDNEEKDSAFRGMCQMITVNPGGIVQDFIYFCDAVASWVNPKQD------LKEIFTKIL 377
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: transportin-1-like (n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255FD2)

HSP 1 Score: 255 bits (651), Expect = 6.320e-75
Identity = 123/271 (45.39%), Postives = 180/271 (66.42%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNP 819
            D+D+ L P LECL+S+  A+      Y +P++ RC+ LTE+TL    A++Q   QVEPP+K+FM+ +LDLLSG++EGL S    L+A SN++ +L QC  D   EVRQS+FA++G+L K+C  H+K  +P FL  L +NL+   E + VCNNA+WAIGEI+      + + ++P ++S+L++II++  T   L+EN  IT+GRLG  CPE +AP L  +   WC  L  +RD  EK++AF+G+C +I  NP+GV+     FC AV SW NP
Sbjct:  581 DEDKDLFPLLECLSSVATALQSGFLPYSEPVYQRCVSLTESTLAQIQASNQNPDQVEPPDKDFMIVALDLLSGLAEGLESYIEGLVARSNIMTLLYQCMQDTMPEVRQSSFALLGDLTKACFQHVKPCIPDFLPILGQNLNP--EFISVCNNATWAIGEISIQMGSAMAE-YIPLVLSQLIEIINRPNTPKTLLENTAITIGRLGFVCPEDVAPMLPHFIRQWCTSLRNIRDNEEKDSAFRGICAMISINPNGVVQDFIFFCDAVASWVNP 848
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Transportin-1-like (isoform X2 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SW77_9ACAR)

HSP 1 Score: 255 bits (651), Expect = 1.240e-74
Identity = 129/289 (44.64%), Postives = 181/289 (62.63%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQIL 873
            DDD+ L P LECL+S+  A+      Y +P+F RCL L E TL    A      Q +PP K+FM+ +LDLLSG++EGLG    +L+ SSN++Q+L QC  D   EVRQS+FA++G+L K+C  H+   + +FL  L +NL    E + VCNNA+WAIGEIA     ++ KP++P ++S+L+ II++  T   L+EN  IT+GRLG  CPE +AP LA++   WC  L  +RD  EK++AF+G+C +I  NP GV+     FC AV SW NP  +      L   F +IL
Sbjct:  636 DDDKDLFPLLECLSSVATALQSGFLPYCEPVFRRCLSLVEQTLNQTLANQSHPDQFDPPNKDFMIVALDLLSGLAEGLGGNIESLVVSSNIMQLLYQCMQDPMPEVRQSSFALLGDLTKACFQHVSPCISEFLPILGQNLKP--EYISVCNNATWAIGEIAVKLGPDM-KPYIPIVLSQLITIINQSGTPKTLLENTAITIGRLGFVCPEEVAPVLAQFIRPWCGSLRNIRDNEEKDSAFRGICAMISVNPGGVVQDFIFFCDAVASWINPKTD------LKHMFHEIL 915
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Transportin (1 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A671VXA2_SPAAU)

HSP 1 Score: 244 bits (622), Expect = 2.900e-74
Identity = 118/271 (43.54%), Postives = 176/271 (64.94%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNP 819
            D+D+ L P LECL+S+  A+      Y +P++ RC+ L + TL     + QP  Q E P+K+FM+ +LDLLSG++EGLG+    L+A SN+L ++ QC  D+  EVRQS+FA++G+L K+C  H+K  +  F+  L  NL+   EL+ VCNNA+WAIGEI+     E+ +P++  ++ +LV+II++  T   L+EN  IT+GRLG  CP+ +AP L ++   WC  L  +RD  EK++AF+G+C +I  NP GV+     FC AV SW NP
Sbjct:  158 DEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMVSSQPD-QYEAPDKDFMIVALDLLSGLAEGLGNTIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP--ELISVCNNATWAIGEISIQMGPEM-QPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVASWVNP 424
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=Q3TS78_MOUSE)

HSP 1 Score: 243 bits (619), Expect = 3.680e-74
Identity = 116/271 (42.80%), Postives = 173/271 (63.84%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNP 819
            D+D+ L P LECL+S+  A+      Y +P++ RC+ L + TL      +    Q E P+K+FM+ +LDLLSG++EGLG     L+A SN+L ++ QC  D+  EVRQS+FA++G+L K+C  H+K  +  F+  L  NL+   E + VCNNA+WAIGEI+     E+ +P++P ++ +LV+II++  T   L+EN  IT+GRLG  CP+ +AP L ++   WC  L  +RD  EK++AF+G+C +I  NP GV+     FC AV SW NP
Sbjct:   98 DEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP--EFISVCNNATWAIGEISIQMGIEM-QPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINP 365
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Match: transportin-1 (n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8FD1D6)

HSP 1 Score: 253 bits (647), Expect = 3.840e-74
Identity = 128/289 (44.29%), Postives = 184/289 (63.67%), Query Frame = 1 
Query:    7 DDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAAADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQCCGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVYVCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVCITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIRHNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQIL 873
            D+D+ L P LECL+SI  A+      Y +P++ RC+ L E TL  H A  Q   Q E P+K+FM+ +LDLLSG++EGL      L+A+SN+LQ+L QC  D   EVRQS+FA++G+L K+C  H+   +  FL  L +NL+   EL+ VCNNA+WAIGEI+     ++ + ++P I+++L+ II+  TT   L+EN  IT+GRLG  CP  +AP L ++   WC  L  +RD  EK++AF+G+CL+I+ NP G+L+    FC AV SW NP P+      L   F +IL
Sbjct:  616 DEDKDLFPLLECLSSIATALQAGFLPYSEPVYRRCVSLVEQTLNQHIANVQNPEQFEAPDKDFMIVALDLLSGLAEGLNGFIEKLIANSNILQLLYQCMQDPMPEVRQSSFALLGDLTKACFQHVSPFVSDFLPLLGQNLNP--ELISVCNNATWAIGEISVKLGADM-RGYIPMILNQLIVIINYPTTPKTLMENTAITIGRLGYVCPAEVAPSLPQFVRKWCSSLRNIRDNEEKDSAFRGMCLMIQANPSGILNDFIFFCDAVASWTNPKPD------LKDMFSKIL 895
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9875.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized7.200e-8986.21protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Transportin-17.600e-7843.60isoform X2 n=1 Tax=Paramuricea clavata TaxID=31754... [more]
Putative4.270e-7542.91nuclear transport receptor karyopherin-beta2/trans... [more]
transportin-1-like4.540e-7544.53isoform X1 n=7 Tax=Asteroidea TaxID=7588 RepID=A0A... [more]
Uncharacterized5.890e-7541.52protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepI... [more]
transportin-1-like6.320e-7545.39n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI... [more]
Transportin-1-like1.240e-7444.64isoform X2 n=1 Tax=Leptotrombidium deliense TaxID=... [more]
Transportin2.900e-7443.541 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6... [more]
Uncharacterized3.680e-7442.80protein (Fragment) n=1 Tax=Mus musculus TaxID=1009... [more]
transportin-13.840e-7444.29n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9875contigH-canaliculatus_M_contigs9875:211..4135 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LLU7
Preferred nameTNPO1
PFAMsHEAT,HEAT_EZ,IBN_N
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K10265,ko:K18727,ko:K18752
KEGG TC1.I.1
Hectar predicted targeting categoryother localisation
GOsGO:0000060,GO:0000166,GO:0000278,GO:0000280,GO:0001882,GO:0001883,GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006606,GO:0006607,GO:0006610,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007275,GO:0008104,GO:0008139,GO:0008150,GO:0008565,GO:0009791,GO:0009892,GO:0009894,GO:0009987,GO:0010458,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016441,GO:0016458,GO:0017038,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030031,GO:0030097,GO:0030427,GO:0030705,GO:0031047,GO:0031090,GO:0031224,GO:0031323,GO:0031329,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033157,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0035166,GO:0035167,GO:0035194,GO:0035195,GO:0035280,GO:0035639,GO:0035735,GO:0036094,GO:0040029,GO:0042073,GO:0042277,GO:0042306,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0045184,GO:0045595,GO:0045596,GO:0046822,GO:0046907,GO:0048285,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051049,GO:0051093,GO:0051147,GO:0051148,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051223,GO:0051233,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060271,GO:0060341,GO:0061013,GO:0061608,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070922,GO:0070925,GO:0071702,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072686,GO:0080090,GO:0090087,GO:0097159,GO:0097367,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0140014,GO:0140104,GO:0140142,GO:1900180,GO:1901265,GO:1901363,GO:1903047,GO:1903311,GO:1903827,GO:1904589,GO:1990023
Exons8
Evalue6.38e-182
EggNOG OGsKOG2023@1|root,KOG2023@2759|Eukaryota
Descriptionribosomal protein import into nucleus
Cds size879
COG categoryK
BRITEko00000,ko03009,ko03019,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9875.1.1prot_H-canaliculatus_M_contigs9875.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9875 211..4135 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854231.9990041-CDS-H-canaliculatus_M_contigs9875:210..2911696854231.9990041-CDS-H-canaliculatus_M_contigs9875:210..291Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 211..291 +
1696854232.0118172-CDS-H-canaliculatus_M_contigs9875:800..8901696854232.0118172-CDS-H-canaliculatus_M_contigs9875:800..890Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 801..890 +
1696854232.0227678-CDS-H-canaliculatus_M_contigs9875:1204..13301696854232.0227678-CDS-H-canaliculatus_M_contigs9875:1204..1330Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 1205..1330 +
1696854232.034449-CDS-H-canaliculatus_M_contigs9875:1848..19501696854232.034449-CDS-H-canaliculatus_M_contigs9875:1848..1950Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 1849..1950 +
1696854232.0468051-CDS-H-canaliculatus_M_contigs9875:2276..23841696854232.0468051-CDS-H-canaliculatus_M_contigs9875:2276..2384Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 2277..2384 +
1696854232.056674-CDS-H-canaliculatus_M_contigs9875:2774..29261696854232.056674-CDS-H-canaliculatus_M_contigs9875:2774..2926Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 2775..2926 +
1696854232.0665126-CDS-H-canaliculatus_M_contigs9875:3304..34191696854232.0665126-CDS-H-canaliculatus_M_contigs9875:3304..3419Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 3305..3419 +
1696854232.0769904-CDS-H-canaliculatus_M_contigs9875:4030..41351696854232.0769904-CDS-H-canaliculatus_M_contigs9875:4030..4135Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9875 4031..4135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9875.1.1

>prot_H-canaliculatus_M_contigs9875.1.1 ID=prot_H-canaliculatus_M_contigs9875.1.1|Name=mRNA_H-canaliculatus_M_contigs9875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=293bp
VADDDRTLLPALECLASIVIAVGGALETYIQPIFMRCLKLTENTLVGHAA
ADQPGYQVEPPEKEFMVCSLDLLSGMSEGLGSGFGALLASSNLLQILLQC
CGDESVEVRQSAFAVVGELAKSCMAHLKQALPQFLERLVRNLSDAIELVY
VCNNASWAIGEIANAAEKEVVKPWVPGIMSRLVDIISKKTTDPKLVENVC
ITVGRLGSACPESLAPDLARYCSDWCEGLTMVRDEGEKEAAFKGLCLVIR
HNPDGVLDSLGSFCRAVGSWHNPDPEANVPPELAGAFKQILQV
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mRNA from alignment at H-canaliculatus_M_contigs9875:211..4135+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9875.1.1 ID=mRNA_H-canaliculatus_M_contigs9875.1.1|Name=mRNA_H-canaliculatus_M_contigs9875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3925bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9875:211..4135+ (Hapterophycus canaliculatus Oshoro7m male)
GTGGCGGACGACGACCGCACGCTGCTGCCGGCGCTGGAGTGTCTCGCATC
CATCGTCATCGCGGTCGGTGGAGCGCTCGAGGTAAGGCGAACTACGGCCA
AGTTCGTTGGAAAGGGGGACGGAGGCGGCCTTGTCCAGCTGCGAGGCGAT
ACGTCCACCAGAGCAGTGCTCGCTCGCCCACGTTGCTCTATCGTCGCCCG
TTTCCAGCGGAACCGGGTTGCTTTTTTACTTTTTTATGCCGCTGCTGCTG
CTGTTTTTTGGAGACAACTTTCAACCGTGCGCGCAGCCTCATGACGTTCA
CGCTGGAGGCTGCTTCGCTCTCCTCCCCGCCGTGTTGTTTTTCCCCTTTG
GCTTGTTCCTGCAAAGGAGCCCCTCCGCCAAATCCTGCGTGAACACGCGC
AGTCCGTCGGGGTCGAAACCCTCGCGAGGCGTGCTCGTCGTACGGGCTCA
TGTTACATCTCTTGCGTTGCCCGTCCTTTTCCTCGCCTTACTCCCCCTTT
ACCGGGTGGGTGTGTGTAGGTGTTGACCCCTATTCCTCCTCTTGGCTCCT
CTCTCTGCGCTTATCTTGGCGTCGCTGCTCGTCGACGCAGACGTACATAC
AGCCCATCTTCATGCGATGCCTCAAGCTGACGGAGAACACGCTCGTGGGA
CACGCCGCGGCGGATCAACCTGGCTACCAGGTAGGCTGGACATCATTTCC
TTCTTTTTTTTCGGGGATGAGACGATTGTTGAGGCGGATGCGGTTGCGGC
TGTGGCGACTCCTTCACTGCGTGCTCCCTGTGCCGTCGGCGCGCGGAAGA
ATGAACGGCCTATCGTTGGGGGAAATGCGCTCTTGTTTAAGACACGTCCA
AAAATCTTGGAAGTCGGCCACGTGAAGAGGCCAGCCCCATTGTGTCGTGC
TCATTAATCATACAGGTGGTTGTTTTTCCTCCTTTTTTTGTTTTCCGACG
TTATTTTTTTCGTTCCCTTTTTCTTTGTCTTCTTTTCCCTGAAGGTGGAA
CCCCCGGAGAAGGAGTTCATGGTGTGCTCGCTGGACCTGTTGAGCGGCAT
GTCGGAGGGGCTGGGCAGCGGGTTCGGGGCCCTTCTCGCCTCCAGCAATC
TCCTCCAAATCCTCTTGCAGGTGCGACCCGGCTGCTACGCGTAGGATGTA
TTTGTGGCGTTTTCTCCCTGTCTACAAAAACGCCTCTTGGTTTTGCAAGC
GTTGCTATGGCTTCGATTGCCTTATTTTGTGTGTCTCGAGGTTGCCGTGT
GCCCGACTATTTTCCCTGTGCTCGGATAGGCACGCGAGAACATGGCACAT
GTATCGCGTACTGAAGGGTACTGAAGGTACATGGGGTTCGTTGTGTTGAT
ACAGCCTCAGCCAACAGTCCGCAACGGCAGCCAAAGGGTCGCGTTTCAAA
AATGCGACAGTTCATGCGCCAACAGCAGGGGCCCGCCTAAACCAAGCCTT
CCCTTTCCGACCCAAACCCAGTCCACCTCCAAGCGATTCCAGTCCAATCT
GCCATCCAATCAAGTCCACAGGCACGTACCGCTTAGTTTCTGACCCAAAT
CCTGTTCCGCTCCTTTCGAACCCGTTTTTGTTCAAACCCACATCCAAATC
CATCCCGTCCGAATAAAAACGAAAAATTCCCGTACCAGTGCTGCGGGGAC
GAGTCAGTGGAGGTGCGACAGTCGGCATTTGCGGTGGTGGGCGAGCTGGC
CAAGTCTTGCATGGCGCACCTGAAGCAGGCGCTGCCTCAGGTGCGCGCGT
CGTGTGCGGACTCGATTGTTGTTGTGGTTGATGCTGGTGCTGGTGCTGGT
GCTCTCGCGACTTTTTCTCGGATCGATTGTGGTCGGTGCTGCTTTCCCCA
CAGCGACTTATTTTTTCTAGGGGGGGGGGGGGGGGGGGCTGCTGGCCGTG
TTGCTTCCGCAGCTGTTTCATTCTCGTGCTCGCCTTGCTTCTGGACCGTG
CCGTCAAGCCACTGGTAGGCGAAACAGTGCTAAGCCCCCTTCCCTCCTCC
CCCCATTGCAACGCAACTGCGTGTATCTCTCGGCTCCTCTTCCGTGTGCG
AATCATCAACCCTCAGTTCTTGGAGAGGCTGGTGAGGAACCTGTCGGACG
CCATCGAGCTGGTGTACGTGTGCAATAACGCCAGCTGGGCCATCGGGGAG
ATCGCCAATGCCGCCGAGAAGGAGGTGTGTCCGCGCGGTAGAGTTTCGTA
TTCTTCCGTTCCGTTCGTATTGTTTTGTTTTTTTGTTTTTCGTTCGTTCG
TTCGCCCTTTGGCTTGTTCGTCGGCTTGGCCTGTGCCTCGTTTGGCCGAC
TGCCCGGCCATTTTTCCCGCCGATCGCTCCGTGGTTGTCGAAAGGCGGCG
CAGCTCTTCGATTGACGGAGCCTCCCCCCCCCCCCTACTCTGCCGAAGAG
ATCACCCCCTGCCCCCACCCCCGCCCCCTCTGTTTGGCCCTTCTCGATCT
TTAGATTTGGACGTCGATGTGTCCCATCCTATGATGTGTTCCTTTTTGCC
GCGCGCGACGGTATCGGCACCCGTTGTCTGTTGTGCTGATCCACGACCCC
CCCGCCTGCTCCAGGTGGTGAAACCTTGGGTACCGGGTATCATGTCTCGG
CTGGTTGATATCATCAGCAAGAAGACCACGGACCCCAAGCTGGTGGAGAA
CGTGTGCATCACCGTGGGCCGGCTCGGATCGGCGTGCCCGGAATCGCTCG
CCCCGGACCTGGCGAGGTGGGTCGAGCGATAAGAGGAAGAGAGAGGGATA
GGGTCAAGGAGAGAGCGGGAGGGGCTGGGAGGGAAAGGACGACACTGTAT
CGCGGGCCAGGGTTGTTTTACGGCAACGGTTGAGTGGCGACTTTTTGTTT
CAGGGAAAAGAGCCAACAACATGTGTGGATTACCGTCTTTTTATCTCTTT
CTCTCAAAAGCTTTGCGGGACTAGGGCGCAAAAATGGAAGGCAGACTCCG
ATGTCGCGCCAGGTTGCAGCTGTCGATAAAAAATAGGACGTGTTGTGTCA
CTCTAGATCCTAGCAGCCCGGAGCGGAAAAAGATGGTGCGAAGCTTACCA
AGCAAGCGCCTCCGCGATGATTTTTTCCTTTTTTCCTTTTGCAGATATTG
CAGCGATTGGTGCGAGGGCCTGACGATGGTCCGAGATGAAGGCGAGAAGG
AGGCTGCGTTCAAGGGGCTGTGTCTAGTGATCAGGCACAACCCGGACGGG
GTCCTCGACGTGAGATGAGAGCAACACTCCTGGTGGACGAGCGACCGTAC
GCTCTGCGGTGATCGCCGCAGTGCGGTGGTGCCGTTCGTTGTCCGTTCTT
TTCTTGAAAGTCTCGGTTCTGTCCACTGTGTCCTGAAGGCCAGTTTATCG
TTGCGGTTGTAGCCTCCTCTTCCTCGTCCTCCTCCTCCTCCTCCTTGATA
ATTGTGATCGTGATCTGTGTCATGCCTCGTCCAACTTTTGTTGCTCTTCC
CGTTGCCGTCGCCACTGTTGCGGCAGCCACGGTTGCGGCTGCGGTTGCGG
TTGCCAGAGATGCGGCAGTCTCTCTCGAATTTTCTCTTTGCTTCTTTTTC
CAGCGGCGGCGATTCGGGACACGGGGTAGACGGCAGCCGTCGTCCGCTAC
CCACGGAGACGCGTGTGTCCTGTTCCAACCAGCCTCCGACCCACCCGGCC
TCACCCCACCCCACCCGAACCCCAATCTCCTCCGCCTTTGTCGCTGCATC
TCCCTTGCCGCGCGATCGGTGTGCGCGTGTGCATGTGTGTGTTTGCGTGC
GTATGTCCTTCCTTTTCCCCGGCGAAAAAATCAACGACACGGCGATCGTT
GCACCGATCGACCTCTCCAGTCGCTGGGCAGCTTCTGCCGCGCCGTGGGC
TCGTGGCACAACCCCGACCCGGAGGCCAACGTCCCGCCAGAGCTGGCCGG
GGCCTTCAAGCAGATCCTGCAGGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9875:211..4135+

>mRNA_H-canaliculatus_M_contigs9875.1.1 ID=mRNA_H-canaliculatus_M_contigs9875.1.1|Name=mRNA_H-canaliculatus_M_contigs9875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=879bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9875:211..4135+ (Hapterophycus canaliculatus Oshoro7m male)
GTGGCGGACGACGACCGCACGCTGCTGCCGGCGCTGGAGTGTCTCGCATC
CATCGTCATCGCGGTCGGTGGAGCGCTCGAGACGTACATACAGCCCATCT
TCATGCGATGCCTCAAGCTGACGGAGAACACGCTCGTGGGACACGCCGCG
GCGGATCAACCTGGCTACCAGGTGGAACCCCCGGAGAAGGAGTTCATGGT
GTGCTCGCTGGACCTGTTGAGCGGCATGTCGGAGGGGCTGGGCAGCGGGT
TCGGGGCCCTTCTCGCCTCCAGCAATCTCCTCCAAATCCTCTTGCAGTGC
TGCGGGGACGAGTCAGTGGAGGTGCGACAGTCGGCATTTGCGGTGGTGGG
CGAGCTGGCCAAGTCTTGCATGGCGCACCTGAAGCAGGCGCTGCCTCAGT
TCTTGGAGAGGCTGGTGAGGAACCTGTCGGACGCCATCGAGCTGGTGTAC
GTGTGCAATAACGCCAGCTGGGCCATCGGGGAGATCGCCAATGCCGCCGA
GAAGGAGGTGGTGAAACCTTGGGTACCGGGTATCATGTCTCGGCTGGTTG
ATATCATCAGCAAGAAGACCACGGACCCCAAGCTGGTGGAGAACGTGTGC
ATCACCGTGGGCCGGCTCGGATCGGCGTGCCCGGAATCGCTCGCCCCGGA
CCTGGCGAGATATTGCAGCGATTGGTGCGAGGGCCTGACGATGGTCCGAG
ATGAAGGCGAGAAGGAGGCTGCGTTCAAGGGGCTGTGTCTAGTGATCAGG
CACAACCCGGACGGGGTCCTCGACTCGCTGGGCAGCTTCTGCCGCGCCGT
GGGCTCGTGGCACAACCCCGACCCGGAGGCCAACGTCCCGCCAGAGCTGG
CCGGGGCCTTCAAGCAGATCCTGCAGGTG
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