mRNA_H-canaliculatus_M_contigs9823.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9823.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9823.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.820e-17
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRGGLIIRKLCVLL+PKTIYVA+ASVLQTNSDLEFIGVMVE
Sbjct:  435 RRLLETRGGLIIRKLCVLLQPKTIYVAVASVLQTNSDLEFIGVMVE 480
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2H9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-9
Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIRKLCVLL  K+IY++LA+VL+   DLEF  +MV+
Sbjct:   37 RRLLETRGSLIIRKLCVLLNAKSIYISLAAVLRKTPDLEFASIMVQ 82
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F1M7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-8
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQ--TNSDLEFIGVMVE 138
            RRLLETRG LIIRKLCVLL  K+IY++LA VL+  + SDLEF  +MV+
Sbjct:   38 RRLLETRGSLIIRKLCVLLNAKSIYISLADVLKKTSTSDLEFASIMVQ 85
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vacuolar (protein 14 C-terminal Fig4p binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ67_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.150e-8
Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLE RG LI+RKLC+LL  ++IY+ALA+VL+  +DL+F+ +MV+
Sbjct:  439 RRLLEVRGSLIVRKLCLLLNARSIYMALAAVLEGKTDLQFVSLMVQ 484
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KDM9_RHIST)

HSP 1 Score: 54.7 bits (130), Expect = 2.720e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LC+ L P+ IY A+A +L+ + DLEF  +M++
Sbjct:  424 RRLLETRGSLIIRQLCMSLDPERIYCAIADILEQDEDLEFASIMIQ 469
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642VE39_9ASCO)

HSP 1 Score: 54.7 bits (130), Expect = 2.720e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LCV L+P+ IY  LA +++ + D+EF  +MV+
Sbjct:  543 RRLLETRGNLIIRQLCVSLKPERIYRTLAEIIEQDDDMEFASIMVQ 588
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein n=4 Tax=Mucor TaxID=4830 RepID=S2JBC6_MUCC1)

HSP 1 Score: 54.7 bits (130), Expect = 2.730e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LC+ L P+ IY A+A +L+ + DLEF  +M++
Sbjct:  575 RRLLETRGSLIIRQLCMSLDPERIYCAIADILEQDEDLEFASIMIQ 620
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BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Protein (VAC14 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NCF6_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 2.730e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LC+ L P+ IY A+A +L+ + DLEF  +M++
Sbjct:  565 RRLLETRGSLIIRQLCMSLDPERIYCAIADILEQDEDLEFASIMIQ 610
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NBX3_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 2.730e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LC+ L P+ IY A+A +L+ + DLEF  +M++
Sbjct:  594 RRLLETRGSLIIRQLCMSLDPERIYCAIADILEQDEDLEFASIMIQ 639
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Match: Vac14_Fig4_bd (domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7R7T0_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 2.730e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVE 138
            RRLLETRG LIIR+LC+ L P+ IY A+A +L+ + DLEF  +M++
Sbjct:  600 RRLLETRGSLIIRQLCMSLDPERIYCAIADILEQDEDLEFASIMIQ 645
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9823.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Vac14_Fig4_bd1.820e-1795.65domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical1.400e-967.39protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.500e-866.67protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Vacuolar4.150e-858.70protein 14 C-terminal Fig4p binding-domain-contain... [more]
Vac14_Fig4_bd2.720e-756.52domain-containing protein (Fragment) n=1 Tax=Rhizo... [more]
Vac14_Fig4_bd2.720e-756.52domain-containing protein n=1 Tax=Trichomonascus c... [more]
Vac14_Fig4_bd2.730e-756.52domain-containing protein n=4 Tax=Mucor TaxID=4830... [more]
Protein2.730e-756.52VAC14 n=1 Tax=Choanephora cucurbitarum TaxID=10109... [more]
Vac14_Fig4_bd2.730e-756.52domain-containing protein n=1 Tax=Parasitella para... [more]
Vac14_Fig4_bd2.730e-756.52domain-containing protein n=1 Tax=Mucor plumbeus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9823contigH-canaliculatus_M_contigs9823:662..820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LEZ3
Preferred nameVAC14
PFAMsVac14_Fab1_bd,Vac14_Fig4_bd
Model size159
Max annot lvl2759|Eukaryota
KEGG koko:K10875,ko:K15305
KEGG Pathwayko03440,ko05166,ko05203,map03440,map05166,map05203
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0000306,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005942,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007267,GO:0008047,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009628,GO:0009893,GO:0009987,GO:0010008,GO:0010562,GO:0012505,GO:0016020,GO:0019207,GO:0019209,GO:0019220,GO:0019222,GO:0019637,GO:0019898,GO:0023052,GO:0030154,GO:0030234,GO:0030674,GO:0031090,GO:0031312,GO:0031323,GO:0031325,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0031984,GO:0032502,GO:0032991,GO:0033674,GO:0035032,GO:0038023,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045165,GO:0045168,GO:0045937,GO:0046331,GO:0046474,GO:0046486,GO:0046488,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051338,GO:0051347,GO:0051716,GO:0060089,GO:0060090,GO:0061695,GO:0065007,GO:0065009,GO:0070772,GO:0071704,GO:0090407,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:0098852,GO:1901576,GO:1902494,GO:1990234
Exons1
Evalue2.99e-18
EggNOG OGsKOG0212@1|root,KOG0212@2759|Eukaryota
Descriptionphosphatidylinositol biosynthetic process
Cds size159
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854229.2573798-CDS-H-canaliculatus_M_contigs9823:661..8201696854229.2573798-CDS-H-canaliculatus_M_contigs9823:661..820Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9823 662..820 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9823.1.1prot_H-canaliculatus_M_contigs9823.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9823 662..820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9823.1.1

>prot_H-canaliculatus_M_contigs9823.1.1 ID=prot_H-canaliculatus_M_contigs9823.1.1|Name=mRNA_H-canaliculatus_M_contigs9823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=53bp
RRLLETRGGLIIRKLCVLLRPKTIYVALASVLQTNSDLEFIGVMVEVKRR
TD*
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mRNA from alignment at H-canaliculatus_M_contigs9823:662..820-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9823.1.1 ID=mRNA_H-canaliculatus_M_contigs9823.1.1|Name=mRNA_H-canaliculatus_M_contigs9823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9823:662..820- (Hapterophycus canaliculatus Oshoro7m male)
AGACGACTCTTGGAAACCCGCGGTGGCCTCATCATCCGGAAGCTTTGCGT
GCTGCTGCGACCTAAGACCATCTACGTGGCCCTCGCATCTGTGCTGCAGA
CGAACAGCGATTTGGAGTTCATCGGGGTCATGGTCGAGGTAAAACGAAGG
ACGGACTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9823:662..820-

>mRNA_H-canaliculatus_M_contigs9823.1.1 ID=mRNA_H-canaliculatus_M_contigs9823.1.1|Name=mRNA_H-canaliculatus_M_contigs9823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9823:662..820- (Hapterophycus canaliculatus Oshoro7m male)
AGACGACTCTTGGAAACCCGCGGTGGCCTCATCATCCGGAAGCTTTGCGT
GCTGCTGCGACCTAAGACCATCTACGTGGCCCTCGCATCTGTGCTGCAGA
CGAACAGCGATTTGGAGTTCATCGGGGTCATGGTCGAGGTAAAACGAAGG
ACGGACTAA
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