mRNA_H-canaliculatus_M_contigs9801.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Uncharacterized (protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 218 bits (556), Expect = 9.900e-69 Identity = 102/155 (65.81%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 1 LFTVALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECPGQELSFVSPSANPYYWKLQPRGTKTPVQTLTIDGQRAERSDNDNFFVRTNSGSKWNGAQTVMTTTVAGETETTEV 465
+ VALN +Q+ S+MCGAC+EGTA GS G G++PIP TFKAF+TD+CPEC +GDLDF+MSGDGRW I+WKFV CPG+E SFVSPSANPYYWK+QPRGT TPV +LT+DGQ A R+ +++F V N G+ W+GAQTV+TTTV+G TET EV
Sbjct: 136 MIPVALNAEQYGDSLMCGACVEGTASGS-----GSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVH-NDGAAWSGAQTVVTTTVSGVTETAEV 284
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.160e-46 Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 10 VALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECPGQELSFVSPSANPYYWKLQPRGTKTPVQTLTIDGQRAERSDNDNFFVRTNSGSKWNGAQTVMTTTVAGETETTEV 465
VALN Q+ S+MCG+C+EG G GGG +PI TFK F+ D+CPEC EGDLDF DGRW I+W+FV CPG+E+SF PYYWK+QPRGT TPV++LTI G+ A R+D+++F + SG+ W Q V+TTTV G E TE+
Sbjct: 383 VALNAAQYGDSLMCGSCVEGEGTGG-----GGGDNPIG-TFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEM 528
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 163 bits (412), Expect = 5.090e-45 Identity = 81/153 (52.94%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 10 VALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP-GQELSFVSPSANPYYWKLQPRGTKTPVQTLTIDGQRAERSDNDNFFVRTNSGSKWNGAQTVMTTTVAGETETTEV 465
VALN Q+ S+MCGAC+EG G G G P+ TFK F+ D+CPEC EGDLDF DGRW I WKFVECP G+E+SF YYWK+QPRGT TPV++LTI G+ A R+D+++F + SG W Q V+TTTV G E TE+
Sbjct: 346 VALNEPQYGDSLMCGACVEGEGTGG-----GSGSDPVG-TFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEM 492
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Putative (lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.210e-42 Identity = 75/147 (51.02%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 1 LFTVALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECPG-QELSFVSPSANPYYWKLQPRGTKTPVQTLTIDGQRAERSDNDNFFVRTNSGSKWNGAQTVMTTTV 438
+ VALN++Q+ S MCGACIEG G +G G P+ FKA+VTDRCPEC+ GDLDFA GDGRW I W FV C G + +F+ +N +YWK+QPRG ++PV+ L I+G AERS+ DNFF+ G ++G Q V T TV
Sbjct: 71 MIPVALNDEQYADSYMCGACIEGEGFG-----EGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSE-DNFFIL--EGGPFDGEQEVHTKTV 209
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: uncharacterized (protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN) HSP 1 Score: 95.5 bits (236), Expect = 3.830e-21 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 7 TVALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP-GQELSFVSPSANPYYWKLQPRGTKTPVQTLTI-DGQRAE----RSDNDNFFV 381
T A+N +Q+ GS+ CG C+ T G G G +P+ T+ +VTD CP C +GD+DFA+ GDGRW ID+ V CP +S+ ++P+Y K+Q T+ PV + + +G E ND F++
Sbjct: 70 TAAINIEQFTGSLTCGICLRVTGSGQ-----GLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWI 195
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: expansin-YoaJ-like (n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09B08) HSP 1 Score: 93.6 bits (231), Expect = 1.850e-20 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 10 VALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP--GQELSFVSPSANPYYWKLQPRGTKTPVQTLTID 339
VA+N +Q+ GS+ CG C G G G PI F FV D CPEC EGD+D A GDG W ++ + V+CP ++ + +NP+Y KLQ R + PV ++ +D
Sbjct: 65 VAINAEQYSGSIACGMCFRVRGKGV-----GTGSDPIQGDFYVFVNDICPECKEGDIDLAEEGDGSWEVEIQAVQCPVGNTKIEYKFQGSNPWYIKLQVRNARIPVNSIMVD 171
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Expansin ((Peptidoglycan-binding protein) n=2 Tax=Marinicella litoralis TaxID=644220 RepID=A0A4R6XIA9_9GAMM) HSP 1 Score: 92.0 bits (227), Expect = 1.840e-19 Identity = 53/138 (38.41%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 4 FTVALNNDQWEGSMM---CGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSG--DGRWFIDWKFVECP--GQELSFVSPSANPYYWKLQPRGTKTPVQTLTIDGQR------AERSDNDNFF 378
F VALN Q+ M CG C+ T G+ G G+ P P+ F A V DRCPEC+EGDLD DGRW I W ++CP L+++ +NP+Y K+ R + +++L + Q AER+ DNFF
Sbjct: 101 FKVALNQSQYTSGDMSAGCGTCLSATYLGT-----GLGNDPPPQQFTALVVDRCPECIEGDLDLHAEPQLDGRWDIAWSAIDCPVGNTTLAYLFEGSNPFYIKMGVRNHRIAIKSLQVQPQTNGPFFTAERTS-DNFF 232
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: expansin-YoaJ-like (n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62068) HSP 1 Score: 90.9 bits (224), Expect = 2.350e-19 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 10 VALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP--GQELSFVSPSANPYYWKLQPRGTKTPVQTLTID 339
VA+N +Q+ GS+ CG C G G G PI F FV D CPEC EGD+D A GDG W ++ + V+CP ++ + +N +Y KLQ R + PV ++ +D
Sbjct: 74 VAINAEQYSGSLACGMCFRVLGTGV-----GTGSDPIKGDFYVFVNDICPECKEGDIDLAEEGDGSWEVEIQAVQCPVGNTKIEYKFQGSNAWYIKLQVRNARLPVNSILVD 180
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B2M7_LOTGI) HSP 1 Score: 89.7 bits (221), Expect = 6.220e-19 Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 4 FTVALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP--GQELSFVSPSANPYYWKLQPRGTKTPV-QTLTIDGQR 348
+ VALN Q+ +M CG C A+G G G PI F FV D CPEC++GDLD A GDGRW I + V+CP + ++ +N +Y KLQ R + P + + G++
Sbjct: 69 YLVALNKPQFHDAMTCGMCFRVHAEGK-----GAGLDPIEGDFNVFVKDMCPECLQGDLDLAEKGDGRWKILMQAVQCPVGNSYIEYLLQGSNVWYIKLQVRNARVPATEVRALQGEK 181
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL) HSP 1 Score: 87.0 bits (214), Expect = 6.580e-18 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 10 VALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDRCPECVEGDLDFAMSGDGRWFIDWKFVECP--GQELSFVSPSANPYYWKLQPRGTKTPVQTLTID 339
VALN Q+ SM CG CI+ G G G++PI +V D CP C EGD+DFA+ GDGRW I + V+CP + + +N +Y KLQ R + P+ + I+
Sbjct: 70 VALNRPQFLNSMTCGMCIKVVGSGH-----GLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIE 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9801.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9801.1.1 >prot_H-canaliculatus_M_contigs9801.1.1 ID=prot_H-canaliculatus_M_contigs9801.1.1|Name=mRNA_H-canaliculatus_M_contigs9801.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=159bp LFTVALNNDQWEGSMMCGACIEGTADGSYPKNDGGGHSPIPRTFKAFVTDback to top mRNA from alignment at H-canaliculatus_M_contigs9801:3559..4625- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9801.1.1 ID=mRNA_H-canaliculatus_M_contigs9801.1.1|Name=mRNA_H-canaliculatus_M_contigs9801.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1067bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9801:3559..4625- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9801:3559..4625- >mRNA_H-canaliculatus_M_contigs9801.1.1 ID=mRNA_H-canaliculatus_M_contigs9801.1.1|Name=mRNA_H-canaliculatus_M_contigs9801.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=477bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9801:3559..4625- (Hapterophycus canaliculatus Oshoro7m male)back to top |