mRNA_H-canaliculatus_M_contigs9791.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9791.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9791.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: BNR (repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI)

HSP 1 Score: 645 bits (1664), Expect = 1.400e-227
Identity = 317/377 (84.08%), Postives = 337/377 (89.39%), Query Frame = 1
Query:    7 KKKKGKRPEYDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVW 1137
            +KKK K P+ DGRVVNAFTWGTGDGGQLGYG D PI+Q+VPRPAFPIG   GRHVV AAAGGRHSLFLLE GEVLACGVWDDG+LGC +RPVVLVPGS EEMV VPKSLVPRGSET PVP ++  KLIVKELAAGFASSFLVTDFGEVWSWGSGK+GCLGLGD+ESRWFPSRIPLFAE+Q  T ETVSAG+WHVLCLT KT+EVYAWGRNNWGQL          SP+AIRW KRETPL++SAGA+HSVA VDLLRPN RRD+VAYAWG PDHGRLGSERQ THASPMEVEDLT ALRKLKRTI G+SAGG HTLAVLGSGEVAAWGGG YGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVD+AGTQVW
Sbjct:    4 RKKKAKEPKDDGRVVNAFTWGTGDGGQLGYGLDIPIAQNVPRPAFPIGALAGRHVVRAAAGGRHSLFLLECGEVLACGVWDDGQLGCMDRPVVLVPGSTEEMVSVPKSLVPRGSETFPVPVQVPPKLIVKELAAGFASSFLVTDFGEVWSWGSGKFGCLGLGDDESRWFPSRIPLFAENQPATAETVSAGKWHVLCLTQKTHEVYAWGRNNWGQLGTGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDHGRLGSERQQTHASPMEVEDLTHALRKLKRTIAGVSAGGTHTLAVLGSGEVAAWGGGMYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDMAGTQVW 380          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Regulator (of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC7_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.510e-59
Identity = 142/400 (35.50%), Postives = 205/400 (51.25%), Query Frame = 1
Query:   43 RVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSL-------------------------------------VPRGSETSPVPARI-SAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKR-ETPLQVSAGAEHSVAKVDLLRPNHRRDVV-AYAWGKPDHGRLGSERQHTHAS----PMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
            R+VN F+WG+   GQLG+G  + + Q +PRP F +G  E   V+ AA G RHSL LL++G VLA G  D+GRLG    P     G D   V  P ++                                      P      P P R+      V+ LA G A+S+ +T FG++++WG G+YG LGLG E     P+R+ +    + + ++ V+AGR H + L  + N  YAWGRN+ GQ+          +P A+ W+   +TPLQ++ GA HS+  V +  PN +   +  Y WG    GRLG+    + A+    P+E+E +T  LRK  R +V ++AG AH++AVL  + EV AWG G YGQLG+G        V   GL  V ++ AG RH+ A+
Sbjct:   19 RLVNVFSWGSAADGQLGHGDTSDVYQSLPRPIFSLGTAESGSVIAAAVGPRHSLLLLKNGFVLAMGAADNGRLGTAA-PAASDSG-DGLKVQAPSTVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPMRQHNYPAPVRLLQPSHKVRALACGGAASYALTAFGDLYAWGCGRYGALGLGHEADAHAPTRVAIALSGRPLPIKAVAAGRSHCVVLA-EGNRAYAWGRNDRGQVGVGGGAHAEAAPRAMGWSPATQTPLQIACGAHHSLCVVAVKAPNRKAAALRVYGWGDAGDGRLGAAAARSGAAFVDRPVEMEAVTALLRKSGRAVVAVAAGSAHSMAVLDVTREVIAWGQGLYGQLGEGSNRSTDIPVYVRGLSDVVTLVAGDRHNAAI 415          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNR9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.930e-39
Identity = 123/385 (31.95%), Postives = 179/385 (46.49%), Query Frame = 1
Query:   52 NAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLI-VKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPS--------RIPLFAESQGVT------VETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXX----------------PSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHA-SPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
            N+  +G  + G +G        Q +P P F +G+ +   V  AA G  H+LF L +G VLACG  +DG+LG  E  +       E+  P P   V            IS K + +K +A   ASSF ++  G+V++WGSG+YG LGLGD E R+ P         R P   +S+  T      V  ++AG WH       T  +++WGR++ GQL                           P  I + K E    V  GAEH+VA V++ R N +  V AY WG  + GRLG+     +   P EV  L + LR  +  +  ++AGG HTL ++  +G++  WG G YG +G G  WD  +      ++    +  G  HS AL
Sbjct:   37 NSMKFGPDEEGPMG-------RQLLPHPCFSLGRLDSMAVKHAAGGAFHTLFALANGNVLACGRNEDGQLGVGEEDL------REKWYPTPTHGV------------ISDKYVYIKMVACAEASSFAMSATGDVYAWGSGRYGVLGLGDTEHRYTPVCVNEAEGLRDPTDRKSRWRTPLWRQRVTKIAAGDWHACVYLGDTERLFSWGRDHEGQLGRGAPFTRSMIHPDIEVQEPGDRFDALPGEIDFMKTEVCKGVDCGAEHTVALVEVERVNGKTQVTAYTWGNAEDGRLGAGADPANRHKPQEVTGLRDLLRAYRLNLQDVAAGGWHTLCLVEKNGQLIGWGRGMYGAVGYGKNWDVADPTPIPLVRAADKIVCGHNHSMAL 396          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYD7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.120e-32
Identity = 81/240 (33.75%), Postives = 121/240 (50.42%), Query Frame = 1
Query:  442 GEVWSWGSGKYGCLGLGDEESRWFPSRIPL--FAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXX----PSPIAIRWAKRETPL--QVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVG----------LSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
            GE+++WGSG+YG LG GDE++   P+++P+     ++   V  +S GRWH + L+     +Y WGRN+ GQL             P+ I +    R  P    ++AGA H V   D  R    +D +AYAWG  +  RL         +P  V  L+  L++ +  +            +  GG HTL     G++ AWG G +GQLG G  WDR + V+   L GV  ++AG+RHS A+
Sbjct:    1 GELFAWGSGRYGALGFGDEQNYNKPTQVPMNNLGLNKKCRVRRISCGRWHCILLSSVEGNLYGWGRNHKGQLGLGVEAVGQNIYSPTLIELEPCDRRQPSIRDIAAGAIHCVVIADRYRGKKEKDTLAYAWGDTNDSRLADANPKKFHTPQVVPALSLLLKQRRLLLAKAPCDPGDSPIIVCGGGHTLVRTNFGQLIAWGAGSHGQLGYGEQWDRQDCVLIPDLYGVIDMAAGSRHSVAI 240          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HGJ1_9CRYP)

HSP 1 Score: 124 bits (312), Expect = 1.650e-27
Identity = 96/308 (31.17%), Postives = 151/308 (49.03%), Query Frame = 1
Query:   58 FTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVL-GSGEVA 978
            +TWG+G+ G+LG+G +  + Q  P+    +   +G+ V F AAGG HS  ++E G +L  G    G+LG            DE     PK +  +G +          + I  E+A G   + ++T   EVW+WGSG++G LG+GDEE    P  I      QGV V  +S G +H   LT +   +Y WG  + GQL           P+ +   + +   +VSAG  H++A +D        +   Y+WG  ++GRLG + +    +P  +E L      + + +  +S+GG H+LA+  GSGE A
Sbjct:  115 YTWGSGEYGRLGHGDE--VRQASPKLVEAL---QGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG----------HGDETDRKAPKMV--KGVQ----------QCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITAL---QGVGVIHISTGGFHSAALTSE-GVLYTWGGGDKGQLGHGDENSQN-IPVVVEALRGKRVTRVSAGMHHTMALLD--------NADVYSWGSGEYGRLGHDDEQMQTTPFLIEQL------IGKGVREISSGGFHSLALASGSGETA 376          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: ultraviolet-B (receptor UVR8 isoform X2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C0724)

HSP 1 Score: 116 bits (290), Expect = 1.490e-25
Identity = 105/340 (30.88%), Postives = 157/340 (46.18%), Query Frame = 1
Query:   34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVM 1047
            Y    V  ++WG GD G+LG+G     S DV  P  PI   +G  +   A G  H L +  +GEV + G   +G+LG          G+ E+ +               VP +I A   + VK +AAG   +  VT+ G+++ WG G+YG LGLGD   R  P ++    + + V V   + G  H + ++   N +Y +G + +GQL          SP  +   +     QVS G  H++A           D   Y WG    G+LG +      SP++V+    A +KLK+    +S G  HTLA+   G V +WG G  GQLG G + DR  S++
Sbjct:   87 YSESDVQVYSWGWGDFGRLGHGN----SSDVFTPQ-PIKALQGLQIRHIACGDSHCLAVTMNGEVQSWGRNQNGQLGL---------GTTEDSL---------------VPQKIQAFQGIHVKMIAAGAEHTAAVTENGDLYGWGWGRYGNLGLGDRNDRMLPEKVASIEDEKMVLV---ACGWRHTITVSSSGN-LYTYGWSKYGQLGHGDYEDHL-SPHLLEALRDNDISQVSGGWRHTMALTT--------DGRLYGWGWNKFGQLGIDDNDDRCSPVQVK--LPADQKLKQ----ISCGWRHTLALTERGNVFSWGRGTSGQLGHGDILDRSCSII 378          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: ultraviolet-B (receptor UVR8 isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UHH9_SESIN)

HSP 1 Score: 117 bits (292), Expect = 1.790e-25
Identity = 107/368 (29.08%), Postives = 164/368 (44.57%), Query Frame = 1
Query:   34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQGVRSVSAGARHSTALAVDLAGTQ 1131
            Y    +  ++WG GD G+LG+G  + +    P  A      +G  +   A G  H L +   GEV + G   +G+LG          G+ E+      SLVPR  E           + VK +AAG   +  VT+ GE++ WG G+YG LGLGD + R  P ++      QG  +  V+ G  H + ++  +  +Y +G + +GQL           P  +   +     Q+S G  H++A           D   Y WG    G++G      H SP++V+        L + +V +S G  HTLAV     V +WG G  GQLG G   DR  P+ + A  + G    S+G +H  A  VD++  +
Sbjct:   90 YSESQLQVYSWGWGDFGRLGHGNSSDLFTPQPIKAL-----QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL---------GNTED------SLVPRKIEAF-------QGISVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRDDRLVPGKVSTI---QGEKMVLVACGWRHTISVS-SSGSIYTYGWSKYGQLGHGDFEDHL-IPQKLEALREHRISQISGGWRHTMAVT--------ADGKLYGWGWNKFGQVGVGNNVDHCSPVQVKF------PLDQKVVNISCGWRHTLAVTERQNVFSWGRGTNGQLGHGDSVDRNIPKIIEALSMDG----SSG-QHIEASKVDVSSAE 406          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PLZ0_AMBTC)

HSP 1 Score: 116 bits (290), Expect = 3.010e-25
Identity = 100/349 (28.65%), Postives = 153/349 (43.84%), Query Frame = 1
Query:   34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQGV 1068
            Y       ++WG GD G+LG+G  + +    PRP   +   +G  +     G  H L +   GEV + G   +G+LG                           +E S VP RI A   + VK +AAG   +  VT+ GE++ WG G+YG LGLGD   R FP ++   A   G  +  V+ G  H + ++    ++Y +G + +GQL           P  +R    +   Q+S G  H++A           D + Y WG    G+LG      H SP +V      +   ++ ++ +S G  HTLA+   G V +WG G  GQLG G   DR  P+ +    + G+
Sbjct:   77 YSESPFQVYSWGWGDFGRLGHGNSSDLF--TPRPIKSL---QGLKIKQITCGDSHCLAVTAQGEVQSWGRNQNGQLGLGH------------------------TEDSLVPQRIQAFQGVPVKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLFPEKV---AAIDGQKMSMVACGWRHTIVVS-SIGKLYTYGWSKYGQLGHGDYEDHL-IPHQLRALSNDYITQISGGWRHTMALTS--------DGMLYGWGWNKFGQLGVGDNADHCSPKQV------IFPPEQKVIRVSCGWRHTLAITDKGNVFSWGRGTSGQLGHGDSIDRNVPKVIEVLSVDGL 377          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9URU1_MANES)

HSP 1 Score: 115 bits (289), Expect = 4.270e-25
Identity = 105/370 (28.38%), Postives = 165/370 (44.59%), Query Frame = 1
Query:   34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVW 1137
            Y     N ++WG GD G+LG+G     S D+  P  PI    G  +   A G  H L +   G+V + G   +G+LG          G+ E+ +               VP +I A  K+ +K +AAG   +  VT+ GE++ WG G+YG LGLGD   R  P ++ L   S G  +  V+ G  H + ++  +  +Y +G + +GQL           P  +   +     Q+S G  H++A           D   Y WG    G++G      H SP +V+   E      + ++ +S G  HTLAV     V +WG G  GQLGDG   DR   V+   ++ +    +G +   +  VD++  ++W
Sbjct:   81 YSESHANVYSWGWGDFGRLGHGN----SSDLFTPQ-PIRALHGLRIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGL---------GTTEDSL---------------VPQKIQAFQKIPIKMVAAGAEHTAAVTESGELYGWGWGRYGNLGLGDRRDRLVPEKVSL---SHGEKMVMVACGWRHTISVS-SSGGLYTYGWSKYGQLGHGDFADHL-IPHQLEALQGSFISQISGGWRHTMAVTS--------DGKLYGWGWNKFGQVGVGDNVDHCSPEQVKFPNE------QKVIQISCGWRHTLAVTEQQNVFSWGRGTNGQLGDGVSIDRNAPVI---IEALSVEGSGCQQIESSTVDISSGKMW 399          
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RFR2_PHAAN)

HSP 1 Score: 115 bits (289), Expect = 4.510e-25
Identity = 99/338 (29.29%), Postives = 158/338 (46.75%), Query Frame = 1
Query:   58 FTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQG 1065
            ++WG GD G+LG+G  + +   +P+P   +   +G  +   A G  H L +   GEV + G   +G+LG          G+ E+      SLVP+  +T         ++ +K +AAG   S  +T+ GE++ WG G+YG LGLGD   RW P ++      + V V   + G  H + ++  +  +Y +G + +GQL           P  ++    E   QVS G  HS+A             + Y WG    G++G +      SP++V+   + + + K  IV +S G  HT+AV     V +WG G  GQLG G   DR  P+ + A  + G
Sbjct:   89 YSWGWGDFGRLGHGNSSDLL--IPQPIVAL---QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL---------GTTED------SLVPQKIQTF-------QEIPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSIDCDKMVMV---ACGWRHTISVS-SSGGLYTYGWSKYGQLGHGNFEDSLV-PHKLQALSDELICQVSGGWRHSMALTST--------GLLYGWGWNKFGQVGVDDNVDRCSPVQVKFPHDQVLETK--IVQISCGWRHTIAVTDKNNVYSWGRGTNGQLGHGDTIDRNSPKIIEALSVDG 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
BNR1.400e-22784.08repeat domain protein n=2 Tax=Ectocarpus TaxID=287... [more]
Regulator6.510e-5935.50of chromosome condensation 1/beta-lactamase-inhibi... [more]
Hypothetical3.930e-3931.95protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical7.120e-3233.75protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical1.650e-2731.17protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
ultraviolet-B1.490e-2530.88receptor UVR8 isoform X2 n=1 Tax=Zingiber officina... [more]
ultraviolet-B1.790e-2529.08receptor UVR8 isoform X1 n=2 Tax=Sesamum indicum T... [more]
Uncharacterized3.010e-2528.65protein n=1 Tax=Amborella trichopoda TaxID=13333 R... [more]
Uncharacterized4.270e-2528.38protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0... [more]
Uncharacterized4.510e-2529.29protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9791contigH-canaliculatus_M_contigs9791:2778..4643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6L9
PFAMsRCC1
Model size1137
Max annot lvl2759|Eukaryota
KEGG koko:K10614
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.3e-228
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-00_009930.1
EC2.3.2.26
Descriptionguanyl-nucleotide exchange factor activity
Cds size1137
COG categoryDZ
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854227.445952-CDS-H-canaliculatus_M_contigs9791:2777..32241696854227.445952-CDS-H-canaliculatus_M_contigs9791:2777..3224Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9791 2778..3224 +
1696854227.4593837-CDS-H-canaliculatus_M_contigs9791:3534..37351696854227.4593837-CDS-H-canaliculatus_M_contigs9791:3534..3735Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9791 3535..3735 +
1696854227.4704375-CDS-H-canaliculatus_M_contigs9791:4154..46431696854227.4704375-CDS-H-canaliculatus_M_contigs9791:4154..4643Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9791 4155..4643 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9791.1.1prot_H-canaliculatus_M_contigs9791.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9791 2778..4643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9791.1.1

>prot_H-canaliculatus_M_contigs9791.1.1 ID=prot_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=379bp
MVKKKKGKRPEYDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIG
KGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGS
DEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEV
WSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLT
LKTNEVYAWGRNNWGQLGTGETSPGEPSPIAIRWAKRETPLQVSAGAEHS
VAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALR
KLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMA
TGLQGVRSVSAGARHSTALAVDLAGTQVW
back to top

mRNA from alignment at H-canaliculatus_M_contigs9791:2778..4643+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9791.1.1 ID=mRNA_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1866bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9791:2778..4643+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGAAAAAGAAGAAGGGTAAGAGGCCCGAATATGACGGACGTGTCGT CAACGCCTTTACGTGGGGCACCGGCGATGGCGGTCAGCTGGGGTACGGCC AAGACACGCCGATCTCGCAGGACGTTCCTCGGCCGGCGTTCCCGATAGGG AAAGGAGAGGGCCGGCATGTCGTCTTCGCAGCCGCAGGAGGTAGGCATTC GCTATTCCTGCTCGAGTCTGGCGAGGTGTTAGCCTGCGGTGTGTGGGACG ACGGGCGGCTGGGGTGCAAGGAGCGTCCCGTTGTGCTTGTTCCGGGATCC GATGAGGAGATGGTACCGGTACCCAAGTCCCTCGTGCCACGAGGGAGCGA GACGTCCCCTGTTCCAGCAAGAATATCAGCCAAGCTAATTGTGAAAGAGC TGGCGGCAGGGTTCGCTTCCAGCTTCCTTGTGACGGATTTTGGTGAGGTG TGTGTCCGTGTGTCCATTTTCATGCACATTCGTGATCTTGATACATGTAG CAACCACAGCAGTCCTCCACGTTGTTCGGCACTGTAGACTGTACGGACAA AGGTACAGGTGCGACTGCTTGTACCGGCTGTTCACATAAGTATTCCCATG CTGTTTTCCTGCAGTGCTCTTGAAGCATGCGCTACCCCGTGCAGCGATCG AACCATGGTGCCTACCCTCGCGGCCTACCTCGAAGAGAAAAGAACCGCGG TTGTTCATCTGCATGTCTCAGACGGCGTGATTGATCCTTCCGGCGTATTT TCTGCAGGTTTGGTCGTGGGGCAGCGGGAAATACGGTTGCCTCGGCTTGG GCGATGAAGAGAGTCGGTGGTTCCCTAGCCGCATCCCGCTGTTCGCCGAA AGCCAAGGAGTCACGGTTGAAACAGTCAGCGCCGGTAGGTGGCATGTGCT TTGCCTCACTCTGAAGACCAACGAGGTGTACGCGTGGGGGCGCAACAACT GGGGTCAGGTAGGTTTAGGTTCGTAGGTTCATGCCCGATATCTGTTTTCT TACAGGACCATGCCTTAAAGCTGATACCGTATACAATTTTGAACAATTCT ACCAACGGCTGATGCTGTTGAAAGCGGACATATGGAGGCGAGCAGAACAA GATGCGTCTCCCCTCCTACCTGAGGATGATTTTTCACGTTCCGAAAGAAC AATCAGTTTGCCCCCCTTTTTTCATGCCACACGACAGCCTGAGCTCTACA TCCCCGCATTCTCACTCGATCGCGTGCTTGCGCTCTCGTAAGAGTCGCAT CGTTTCACATCGTTACTAGAGTCGTGGCCCTTATGGTCCGCCTCACGGCA GCCGAATTTCCTGCTTTTCGGTGTGCATCACCTCGACTCCGTGCCCACCA CTCTCGCGGATCGCACGCTGAGCGCAGCTCGGGACCGGAGAGACCAGCCC TGGCGAGCCGAGTCCGATCGCAATACGCTGGGCCAAGCGAGAGACCCCGC TGCAGGTCTCGGCCGGAGCGGAGCACAGCGTGGCCAAGGTGGACCTCCTG CGCCCCAACCACCGGCGGGACGTCGTCGCCTACGCCTGGGGAAAGCCGGA CCACGGCCGGCTAGGCTCTGAGCGACAACACACGCACGCCTCGCCAATGG AGGTCGAGGATCTCACGGAAGCTCTCCGGAAGTTGAAGCGCACCATCGTT GGCCTCTCAGCAGGTGGGGCGCACACCCTGGCCGTGCTCGGCTCCGGGGA GGTAGCCGCGTGGGGCGGAGGGGGCTACGGGCAGCTTGGGGACGGTCATA TGTGGGATAGGCCTGAGTCGGTGATGGCGACCGGGTTGCAGGGAGTTCGA TCGGTCAGCGCCGGCGCGAGGCACTCGACTGCTCTCGCGGTAGACCTCGC GGGCACTCAGGTGTGG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9791:2778..4643+

>mRNA_H-canaliculatus_M_contigs9791.1.1 ID=mRNA_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1137bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9791:2778..4643+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGAAAAAGAAGAAGGGTAAGAGGCCCGAATATGACGGACGTGTCGT
CAACGCCTTTACGTGGGGCACCGGCGATGGCGGTCAGCTGGGGTACGGCC
AAGACACGCCGATCTCGCAGGACGTTCCTCGGCCGGCGTTCCCGATAGGG
AAAGGAGAGGGCCGGCATGTCGTCTTCGCAGCCGCAGGAGGTAGGCATTC
GCTATTCCTGCTCGAGTCTGGCGAGGTGTTAGCCTGCGGTGTGTGGGACG
ACGGGCGGCTGGGGTGCAAGGAGCGTCCCGTTGTGCTTGTTCCGGGATCC
GATGAGGAGATGGTACCGGTACCCAAGTCCCTCGTGCCACGAGGGAGCGA
GACGTCCCCTGTTCCAGCAAGAATATCAGCCAAGCTAATTGTGAAAGAGC
TGGCGGCAGGGTTCGCTTCCAGCTTCCTTGTGACGGATTTTGGTGAGGTT
TGGTCGTGGGGCAGCGGGAAATACGGTTGCCTCGGCTTGGGCGATGAAGA
GAGTCGGTGGTTCCCTAGCCGCATCCCGCTGTTCGCCGAAAGCCAAGGAG
TCACGGTTGAAACAGTCAGCGCCGGTAGGTGGCATGTGCTTTGCCTCACT
CTGAAGACCAACGAGGTGTACGCGTGGGGGCGCAACAACTGGGGTCAGCT
CGGGACCGGAGAGACCAGCCCTGGCGAGCCGAGTCCGATCGCAATACGCT
GGGCCAAGCGAGAGACCCCGCTGCAGGTCTCGGCCGGAGCGGAGCACAGC
GTGGCCAAGGTGGACCTCCTGCGCCCCAACCACCGGCGGGACGTCGTCGC
CTACGCCTGGGGAAAGCCGGACCACGGCCGGCTAGGCTCTGAGCGACAAC
ACACGCACGCCTCGCCAATGGAGGTCGAGGATCTCACGGAAGCTCTCCGG
AAGTTGAAGCGCACCATCGTTGGCCTCTCAGCAGGTGGGGCGCACACCCT
GGCCGTGCTCGGCTCCGGGGAGGTAGCCGCGTGGGGCGGAGGGGGCTACG
GGCAGCTTGGGGACGGTCATATGTGGGATAGGCCTGAGTCGGTGATGGCG
ACCGGGTTGCAGGGAGTTCGATCGGTCAGCGCCGGCGCGAGGCACTCGAC
TGCTCTCGCGGTAGACCTCGCGGGCACTCAGGTGTGG
back to top