mRNA_H-canaliculatus_M_contigs9791.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: BNR (repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI) HSP 1 Score: 645 bits (1664), Expect = 1.400e-227 Identity = 317/377 (84.08%), Postives = 337/377 (89.39%), Query Frame = 1
Query: 7 KKKKGKRPEYDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVW 1137
+KKK K P+ DGRVVNAFTWGTGDGGQLGYG D PI+Q+VPRPAFPIG GRHVV AAAGGRHSLFLLE GEVLACGVWDDG+LGC +RPVVLVPGS EEMV VPKSLVPRGSET PVP ++ KLIVKELAAGFASSFLVTDFGEVWSWGSGK+GCLGLGD+ESRWFPSRIPLFAE+Q T ETVSAG+WHVLCLT KT+EVYAWGRNNWGQL SP+AIRW KRETPL++SAGA+HSVA VDLLRPN RRD+VAYAWG PDHGRLGSERQ THASPMEVEDLT ALRKLKRTI G+SAGG HTLAVLGSGEVAAWGGG YGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVD+AGTQVW
Sbjct: 4 RKKKAKEPKDDGRVVNAFTWGTGDGGQLGYGLDIPIAQNVPRPAFPIGALAGRHVVRAAAGGRHSLFLLECGEVLACGVWDDGQLGCMDRPVVLVPGSTEEMVSVPKSLVPRGSETFPVPVQVPPKLIVKELAAGFASSFLVTDFGEVWSWGSGKFGCLGLGDDESRWFPSRIPLFAENQPATAETVSAGKWHVLCLTQKTHEVYAWGRNNWGQLGTGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDHGRLGSERQQTHASPMEVEDLTHALRKLKRTIAGVSAGGTHTLAVLGSGEVAAWGGGMYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDMAGTQVW 380
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Regulator (of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC7_9STRA) HSP 1 Score: 214 bits (544), Expect = 6.510e-59 Identity = 142/400 (35.50%), Postives = 205/400 (51.25%), Query Frame = 1
Query: 43 RVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSL-------------------------------------VPRGSETSPVPARI-SAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKR-ETPLQVSAGAEHSVAKVDLLRPNHRRDVV-AYAWGKPDHGRLGSERQHTHAS----PMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
R+VN F+WG+ GQLG+G + + Q +PRP F +G E V+ AA G RHSL LL++G VLA G D+GRLG P G D V P ++ P P P R+ V+ LA G A+S+ +T FG++++WG G+YG LGLG E P+R+ + + + ++ V+AGR H + L + N YAWGRN+ GQ+ +P A+ W+ +TPLQ++ GA HS+ V + PN + + Y WG GRLG+ + A+ P+E+E +T LRK R +V ++AG AH++AVL + EV AWG G YGQLG+G V GL V ++ AG RH+ A+
Sbjct: 19 RLVNVFSWGSAADGQLGHGDTSDVYQSLPRPIFSLGTAESGSVIAAAVGPRHSLLLLKNGFVLAMGAADNGRLGTAA-PAASDSG-DGLKVQAPSTVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPMRQHNYPAPVRLLQPSHKVRALACGGAASYALTAFGDLYAWGCGRYGALGLGHEADAHAPTRVAIALSGRPLPIKAVAAGRSHCVVLA-EGNRAYAWGRNDRGQVGVGGGAHAEAAPRAMGWSPATQTPLQIACGAHHSLCVVAVKAPNRKAAALRVYGWGDAGDGRLGAAAARSGAAFVDRPVEMEAVTALLRKSGRAVVAVAAGSAHSMAVLDVTREVIAWGQGLYGQLGEGSNRSTDIPVYVRGLSDVVTLVAGDRHNAAI 415
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNR9_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.930e-39 Identity = 123/385 (31.95%), Postives = 179/385 (46.49%), Query Frame = 1
Query: 52 NAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLI-VKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPS--------RIPLFAESQGVT------VETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXX----------------PSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHA-SPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
N+ +G + G +G Q +P P F +G+ + V AA G H+LF L +G VLACG +DG+LG E + E+ P P V IS K + +K +A ASSF ++ G+V++WGSG+YG LGLGD E R+ P R P +S+ T V ++AG WH T +++WGR++ GQL P I + K E V GAEH+VA V++ R N + V AY WG + GRLG+ + P EV L + LR + + ++AGG HTL ++ +G++ WG G YG +G G WD + ++ + G HS AL
Sbjct: 37 NSMKFGPDEEGPMG-------RQLLPHPCFSLGRLDSMAVKHAAGGAFHTLFALANGNVLACGRNEDGQLGVGEEDL------REKWYPTPTHGV------------ISDKYVYIKMVACAEASSFAMSATGDVYAWGSGRYGVLGLGDTEHRYTPVCVNEAEGLRDPTDRKSRWRTPLWRQRVTKIAAGDWHACVYLGDTERLFSWGRDHEGQLGRGAPFTRSMIHPDIEVQEPGDRFDALPGEIDFMKTEVCKGVDCGAEHTVALVEVERVNGKTQVTAYTWGNAEDGRLGAGADPANRHKPQEVTGLRDLLRAYRLNLQDVAAGGWHTLCLVEKNGQLIGWGRGMYGAVGYGKNWDVADPTPIPLVRAADKIVCGHNHSMAL 396
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYD7_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.120e-32 Identity = 81/240 (33.75%), Postives = 121/240 (50.42%), Query Frame = 1
Query: 442 GEVWSWGSGKYGCLGLGDEESRWFPSRIPL--FAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXX----PSPIAIRWAKRETPL--QVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVG----------LSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTAL 1107
GE+++WGSG+YG LG GDE++ P+++P+ ++ V +S GRWH + L+ +Y WGRN+ GQL P+ I + R P ++AGA H V D R +D +AYAWG + RL +P V L+ L++ + + + GG HTL G++ AWG G +GQLG G WDR + V+ L GV ++AG+RHS A+
Sbjct: 1 GELFAWGSGRYGALGFGDEQNYNKPTQVPMNNLGLNKKCRVRRISCGRWHCILLSSVEGNLYGWGRNHKGQLGLGVEAVGQNIYSPTLIELEPCDRRQPSIRDIAAGAIHCVVIADRYRGKKEKDTLAYAWGDTNDSRLADANPKKFHTPQVVPALSLLLKQRRLLLAKAPCDPGDSPIIVCGGGHTLVRTNFGQLIAWGAGSHGQLGYGEQWDRQDCVLIPDLYGVIDMAAGSRHSVAI 240
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HGJ1_9CRYP) HSP 1 Score: 124 bits (312), Expect = 1.650e-27 Identity = 96/308 (31.17%), Postives = 151/308 (49.03%), Query Frame = 1
Query: 58 FTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVL-GSGEVA 978
+TWG+G+ G+LG+G + + Q P+ + +G+ V F AAGG HS ++E G +L G G+LG DE PK + +G + + I E+A G + ++T EVW+WGSG++G LG+GDEE P I QGV V +S G +H LT + +Y WG + GQL P+ + + + +VSAG H++A +D + Y+WG ++GRLG + + +P +E L + + + +S+GG H+LA+ GSGE A
Sbjct: 115 YTWGSGEYGRLGHGDE--VRQASPKLVEAL---QGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG----------HGDETDRKAPKMV--KGVQ----------QCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITAL---QGVGVIHISTGGFHSAALTSE-GVLYTWGGGDKGQLGHGDENSQN-IPVVVEALRGKRVTRVSAGMHHTMALLD--------NADVYSWGSGEYGRLGHDDEQMQTTPFLIEQL------IGKGVREISSGGFHSLALASGSGETA 376
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: ultraviolet-B (receptor UVR8 isoform X2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C0724) HSP 1 Score: 116 bits (290), Expect = 1.490e-25 Identity = 105/340 (30.88%), Postives = 157/340 (46.18%), Query Frame = 1
Query: 34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVM 1047
Y V ++WG GD G+LG+G S DV P PI +G + A G H L + +GEV + G +G+LG G+ E+ + VP +I A + VK +AAG + VT+ G+++ WG G+YG LGLGD R P ++ + + V V + G H + ++ N +Y +G + +GQL SP + + QVS G H++A D Y WG G+LG + SP++V+ A +KLK+ +S G HTLA+ G V +WG G GQLG G + DR S++
Sbjct: 87 YSESDVQVYSWGWGDFGRLGHGN----SSDVFTPQ-PIKALQGLQIRHIACGDSHCLAVTMNGEVQSWGRNQNGQLGL---------GTTEDSL---------------VPQKIQAFQGIHVKMIAAGAEHTAAVTENGDLYGWGWGRYGNLGLGDRNDRMLPEKVASIEDEKMVLV---ACGWRHTITVSSSGN-LYTYGWSKYGQLGHGDYEDHL-SPHLLEALRDNDISQVSGGWRHTMALTT--------DGRLYGWGWNKFGQLGIDDNDDRCSPVQVK--LPADQKLKQ----ISCGWRHTLALTERGNVFSWGRGTSGQLGHGDILDRSCSII 378
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: ultraviolet-B (receptor UVR8 isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UHH9_SESIN) HSP 1 Score: 117 bits (292), Expect = 1.790e-25 Identity = 107/368 (29.08%), Postives = 164/368 (44.57%), Query Frame = 1
Query: 34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQGVRSVSAGARHSTALAVDLAGTQ 1131
Y + ++WG GD G+LG+G + + P A +G + A G H L + GEV + G +G+LG G+ E+ SLVPR E + VK +AAG + VT+ GE++ WG G+YG LGLGD + R P ++ QG + V+ G H + ++ + +Y +G + +GQL P + + Q+S G H++A D Y WG G++G H SP++V+ L + +V +S G HTLAV V +WG G GQLG G DR P+ + A + G S+G +H A VD++ +
Sbjct: 90 YSESQLQVYSWGWGDFGRLGHGNSSDLFTPQPIKAL-----QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL---------GNTED------SLVPRKIEAF-------QGISVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRDDRLVPGKVSTI---QGEKMVLVACGWRHTISVS-SSGSIYTYGWSKYGQLGHGDFEDHL-IPQKLEALREHRISQISGGWRHTMAVT--------ADGKLYGWGWNKFGQVGVGNNVDHCSPVQVKF------PLDQKVVNISCGWRHTLAVTERQNVFSWGRGTNGQLGHGDSVDRNIPKIIEALSMDG----SSG-QHIEASKVDVSSAE 406
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PLZ0_AMBTC) HSP 1 Score: 116 bits (290), Expect = 3.010e-25 Identity = 100/349 (28.65%), Postives = 153/349 (43.84%), Query Frame = 1
Query: 34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQGV 1068
Y ++WG GD G+LG+G + + PRP + +G + G H L + GEV + G +G+LG +E S VP RI A + VK +AAG + VT+ GE++ WG G+YG LGLGD R FP ++ A G + V+ G H + ++ ++Y +G + +GQL P +R + Q+S G H++A D + Y WG G+LG H SP +V + ++ ++ +S G HTLA+ G V +WG G GQLG G DR P+ + + G+
Sbjct: 77 YSESPFQVYSWGWGDFGRLGHGNSSDLF--TPRPIKSL---QGLKIKQITCGDSHCLAVTAQGEVQSWGRNQNGQLGLGH------------------------TEDSLVPQRIQAFQGVPVKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLFPEKV---AAIDGQKMSMVACGWRHTIVVS-SIGKLYTYGWSKYGQLGHGDYEDHL-IPHQLRALSNDYITQISGGWRHTMALTS--------DGMLYGWGWNKFGQLGVGDNADHCSPKQV------IFPPEQKVIRVSCGWRHTLAITDKGNVFSWGRGTSGQLGHGDSIDRNVPKVIEVLSVDGL 377
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9URU1_MANES) HSP 1 Score: 115 bits (289), Expect = 4.270e-25 Identity = 105/370 (28.38%), Postives = 165/370 (44.59%), Query Frame = 1
Query: 34 YDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISA--KLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVW 1137
Y N ++WG GD G+LG+G S D+ P PI G + A G H L + G+V + G +G+LG G+ E+ + VP +I A K+ +K +AAG + VT+ GE++ WG G+YG LGLGD R P ++ L S G + V+ G H + ++ + +Y +G + +GQL P + + Q+S G H++A D Y WG G++G H SP +V+ E + ++ +S G HTLAV V +WG G GQLGDG DR V+ ++ + +G + + VD++ ++W
Sbjct: 81 YSESHANVYSWGWGDFGRLGHGN----SSDLFTPQ-PIRALHGLRIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGL---------GTTEDSL---------------VPQKIQAFQKIPIKMVAAGAEHTAAVTESGELYGWGWGRYGNLGLGDRRDRLVPEKVSL---SHGEKMVMVACGWRHTISVS-SSGGLYTYGWSKYGQLGHGDFADHL-IPHQLEALQGSFISQISGGWRHTMAVTS--------DGKLYGWGWNKFGQVGVGDNVDHCSPEQVKFPNE------QKVIQISCGWRHTLAVTEQQNVFSWGRGTNGQLGDGVSIDRNAPVI---IEALSVEGSGCQQIESSTVDISSGKMW 399
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Match: Uncharacterized (protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RFR2_PHAAN) HSP 1 Score: 115 bits (289), Expect = 4.510e-25 Identity = 99/338 (29.29%), Postives = 158/338 (46.75%), Query Frame = 1
Query: 58 FTWGTGDGGQLGYGQDTPISQDVPRPAFPIGKGEGRHVVFAAAGGRHSLFLLESGEVLACGVWDDGRLGCKERPVVLVPGSDEEMVPVPKSLVPRGSETSPVPARISAKLIVKELAAGFASSFLVTDFGEVWSWGSGKYGCLGLGDEESRWFPSRIPLFAESQGVTVETVSAGRWHVLCLTLKTNEVYAWGRNNWGQLXXXXXXXXXPSPIAIRWAKRETPLQVSAGAEHSVAKVDLLRPNHRRDVVAYAWGKPDHGRLGSERQHTHASPMEVEDLTEALRKLKRTIVGLSAGGAHTLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQG 1065
++WG GD G+LG+G + + +P+P + +G + A G H L + GEV + G +G+LG G+ E+ SLVP+ +T ++ +K +AAG S +T+ GE++ WG G+YG LGLGD RW P ++ + V V + G H + ++ + +Y +G + +GQL P ++ E QVS G HS+A + Y WG G++G + SP++V+ + + + K IV +S G HT+AV V +WG G GQLG G DR P+ + A + G
Sbjct: 89 YSWGWGDFGRLGHGNSSDLL--IPQPIVAL---QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL---------GTTED------SLVPQKIQTF-------QEIPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSIDCDKMVMV---ACGWRHTISVS-SSGGLYTYGWSKYGQLGHGNFEDSLV-PHKLQALSDELICQVSGGWRHSMALTST--------GLLYGWGWNKFGQVGVDDNVDRCSPVQVKFPHDQVLETK--IVQISCGWRHTIAVTDKNNVYSWGRGTNGQLGHGDTIDRNSPKIIEALSVDG 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9791.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9791.1.1 >prot_H-canaliculatus_M_contigs9791.1.1 ID=prot_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=379bp MVKKKKGKRPEYDGRVVNAFTWGTGDGGQLGYGQDTPISQDVPRPAFPIGback to top mRNA from alignment at H-canaliculatus_M_contigs9791:2778..4643+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9791.1.1 ID=mRNA_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1866bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9791:2778..4643+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9791:2778..4643+ >mRNA_H-canaliculatus_M_contigs9791.1.1 ID=mRNA_H-canaliculatus_M_contigs9791.1.1|Name=mRNA_H-canaliculatus_M_contigs9791.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1137bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9791:2778..4643+ (Hapterophycus canaliculatus Oshoro7m male)back to top |